RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 LXNQ9BS40 222 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 WDR11Q9BZH6 1224 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 AKT3Q9Y243 479 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 PPP2R2CQ9Y2T4 447 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 MYMKA6NI61 221 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 ZBTB39O15060 712 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 DMP1Q13316 513 aaPredicted RBP11.16□□□□□ -0.62
TOP3A-208ENST00000542570 MTF1Q14872 753 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 ELF2Q15723 593 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 SLC9C1Q4G0N8 1177 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 USP37Q86T82 979 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 CDR2LQ86X02 465 aaPredicted RBP11.16□□□□□ -0.62
TOP3A-208ENST00000542570 APOBEC3FQ8IUX4 373 aaKnown RBP11.16□□□□□ -0.62
TOP3A-208ENST00000542570 TXLNBQ8N3L3 684 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 AGBL3Q8NEM8 1001 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 IFIH1Q9BYX4 1025 aaKnown RBP11.16□□□□□ -0.62
TOP3A-208ENST00000542570 KMT5AQ9NQR1 393 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 ST7Q9NRC1 585 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 GSTTP1A0A1W2PQM5 241 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 CXCR5P32302 372 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 WDR44Q5JSH3 913 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 LMBRD2Q68DH5 695 aaPredicted RBP11.16□□□□□ -0.62
TOP3A-208ENST00000542570 THNSL1Q8IYQ7 743 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 PARVGQ9HBI0 331 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 TMEM150BA6NC51 233 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 AP5Z1O43299 807 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 ERLIN1O75477 346 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 NCBP1Q09161 790 aaKnown RBP11.16□□□□□ -0.62
TOP3A-208ENST00000542570 NAA30Q147X3 362 aaPredicted RBP11.16□□□□□ -0.62
TOP3A-208ENST00000542570 ZC2HC1CQ53FD0 456 aaPredicted RBP11.16□□□□□ -0.62
TOP3A-208ENST00000542570 SFMBT2Q5VUG0 894 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 PADI6Q6TGC4 694 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 CCDC50Q8IVM0 306 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 CAMKK2Q96RR4 588 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 MAP3K14Q99558 947 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 IRX2Q9BZI1 471 aaPredicted RBP11.16□□□□□ -0.62
TOP3A-208ENST00000542570 TRIM9Q9C026 710 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 USP20Q9Y2K6 914 aa11.16□□□□□ -0.62
TOP3A-208ENST00000542570 SETD1AO15047 1707 aaKnown RBP11.15□□□□□ -0.62
TOP3A-208ENST00000542570 GOLGA6L9A6NEM1 432 aa11.15□□□□□ -0.62
TOP3A-208ENST00000542570 RCAN1P53805 252 aa11.15□□□□□ -0.62
TOP3A-208ENST00000542570 EVCP57679 992 aa11.15□□□□□ -0.62
TOP3A-208ENST00000542570 EXOC3L4Q17RC7 722 aa11.15□□□□□ -0.62
TOP3A-208ENST00000542570 ZNF394Q53GI3 561 aa11.15□□□□□ -0.62
TOP3A-208ENST00000542570 ANKRD40Q6AI12 368 aa11.15□□□□□ -0.62
TOP3A-208ENST00000542570 FAM186BQ8IYM0 893 aa11.15□□□□□ -0.62
TOP3A-208ENST00000542570 FAM133AQ8N9E0 248 aa11.15□□□□□ -0.62
TOP3A-208ENST00000542570 PHLPP1O60346 1717 aa11.15□□□□□ -0.62
TOP3A-208ENST00000542570 ADAMTS3O15072 1205 aa11.15□□□□□ -0.62
TOP3A-208ENST00000542570 TRIM49P0CI25 452 aa11.15□□□□□ -0.62
TOP3A-208ENST00000542570 TRIM49CP0CI26 452 aa11.15□□□□□ -0.62
TOP3A-208ENST00000542570 ARP10275 920 aa11.15□□□□□ -0.62
TOP3A-208ENST00000542570 SSTR3P32745 418 aaPredicted RBP11.15□□□□□ -0.62
TOP3A-208ENST00000542570 COASYQ13057 564 aa11.15□□□□□ -0.62
TOP3A-208ENST00000542570 IQCB1Q15051 598 aa11.15□□□□□ -0.62
TOP3A-208ENST00000542570 ERCC6LQ2NKX8 1250 aa11.15□□□□□ -0.62
TOP3A-208ENST00000542570 NAA35Q5VZE5 725 aa11.15□□□□□ -0.62
TOP3A-208ENST00000542570 TMTC1Q8IUR5 882 aa11.15□□□□□ -0.62
TOP3A-208ENST00000542570 CCDC155Q8N6L0 562 aa11.15□□□□□ -0.62
TOP3A-208ENST00000542570 NSUN6Q8TEA1 469 aaKnown RBP11.15□□□□□ -0.62
TOP3A-208ENST00000542570 SAAL1Q96ER3 474 aa11.15□□□□□ -0.62
TOP3A-208ENST00000542570 ZNF215Q9UL58 517 aaPredicted RBP11.15□□□□□ -0.62
TOP3A-208ENST00000542570 A0A087X0B3 334 aa11.15□□□□□ -0.63
TOP3A-208ENST00000542570 IKBKBO14920 756 aa11.15□□□□□ -0.63
TOP3A-208ENST00000542570 CCND2P30279 289 aa11.15□□□□□ -0.63
TOP3A-208ENST00000542570 TGFB2P61812 414 aa11.15□□□□□ -0.63
TOP3A-208ENST00000542570 GRIPAP1Q4V328 841 aa11.15□□□□□ -0.63
TOP3A-208ENST00000542570 DNAJC21Q5F1R6 531 aaKnown RBP11.15□□□□□ -0.63
TOP3A-208ENST00000542570 C2orf69Q8N8R5 385 aa11.15□□□□□ -0.63
TOP3A-208ENST00000542570 TRPM4Q8TD43 1214 aa11.15□□□□□ -0.63
TOP3A-208ENST00000542570 RAD54LQ92698 747 aa11.15□□□□□ -0.63
TOP3A-208ENST00000542570 CTTNBP2NLQ9P2B4 639 aa11.15□□□□□ -0.63
TOP3A-208ENST00000542570 STK17AQ9UEE5 414 aa11.15□□□□□ -0.63
TOP3A-208ENST00000542570 EPN1Q9Y6I3 576 aaPredicted RBP11.15□□□□□ -0.63
TOP3A-208ENST00000542570 SLIT2O94813 1529 aa11.14□□□□□ -0.63
TOP3A-208ENST00000542570 RSPH10B2B2RC85 870 aa11.14□□□□□ -0.63
TOP3A-208ENST00000542570 NR3C2P08235 984 aa11.14□□□□□ -0.63
TOP3A-208ENST00000542570 RSPH10BP0C881 870 aa11.14□□□□□ -0.63
TOP3A-208ENST00000542570 OSBPP22059 807 aa11.14□□□□□ -0.63
TOP3A-208ENST00000542570 AP3B2Q13367 1082 aa11.14□□□□□ -0.63
TOP3A-208ENST00000542570 TCP11X2Q5H9J9 407 aa11.14□□□□□ -0.63
TOP3A-208ENST00000542570 ZNF579Q8NAF0 562 aaKnown RBP11.14□□□□□ -0.63
TOP3A-208ENST00000542570 KIFC3Q9BVG8 833 aa11.14□□□□□ -0.63
TOP3A-208ENST00000542570 IMPACTQ9P2X3 320 aa11.14□□□□□ -0.63
TOP3A-208ENST00000542570 ADAMTS1Q9UHI8 967 aa11.14□□□□□ -0.63
TOP3A-208ENST00000542570 GOLGB1Q14789 3259 aaKnown RBP11.14□□□□□ -0.63
TOP3A-208ENST00000542570 SMIM23A6NLE4 172 aa11.14□□□□□ -0.63
TOP3A-208ENST00000542570 ATP6V0A1Q93050 837 aa11.14□□□□□ -0.63
TOP3A-208ENST00000542570 MMS19Q96T76 1030 aa11.14□□□□□ -0.63
TOP3A-208ENST00000542570 GBP3Q9H0R5 595 aa11.14□□□□□ -0.63
TOP3A-208ENST00000542570 NDST4Q9H3R1 872 aa11.14□□□□□ -0.63
TOP3A-208ENST00000542570 ADD3Q9UEY8 706 aaKnown RBP11.14□□□□□ -0.63
TOP3A-208ENST00000542570 GFPT2O94808 682 aa11.14□□□□□ -0.63
TOP3A-208ENST00000542570 NFX1Q12986 1120 aaKnown RBP11.14□□□□□ -0.63
TOP3A-208ENST00000542570 TMED8Q6PL24 325 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-208ENST00000542570 KLHL7Q8IXQ5 586 aa11.14□□□□□ -0.63
TOP3A-208ENST00000542570 TAB3Q8N5C8 712 aaPredicted RBP11.14□□□□□ -0.63
TOP3A-208ENST00000542570 KIAA1524Q8TCG1 905 aa11.14□□□□□ -0.63
TOP3A-208ENST00000542570 NXF1Q9UBU9 619 aaKnown RBP11.14□□□□□ -0.63
TOP3A-208ENST00000542570 hCG_1984214I3L0E3 225 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms