RNA–Protein interactions for RNA: ENST00000542416.1

UBC-211, Transcript of ubiquitin C, humanhuman

TSL 4

Gene UBC, Length 517 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-211ENST00000542416 C11orf84Q9BUA3 381 aaPredicted RBP10.39□□□□□ -0.75
UBC-211ENST00000542416 IFIH1Q9BYX4 1025 aaKnown RBP10.39□□□□□ -0.75
UBC-211ENST00000542416 KRT23Q9C075 422 aa10.39□□□□□ -0.75
UBC-211ENST00000542416 CPVLQ9H3G5 476 aa10.39□□□□□ -0.75
UBC-211ENST00000542416 CNNM2Q9H8M5 875 aa10.39□□□□□ -0.75
UBC-211ENST00000542416 CLDND1Q9NY35 253 aa10.39□□□□□ -0.75
UBC-211ENST00000542416 ZNF215Q9UL58 517 aaPredicted RBP10.39□□□□□ -0.75
UBC-211ENST00000542416 PCDHA1Q9Y5I3 950 aa10.39□□□□□ -0.75
UBC-211ENST00000542416 TET1Q8NFU7 2136 aa10.39□□□□□ -0.75
UBC-211ENST00000542416 NEDD4P46934 1319 aa10.38□□□□□ -0.75
UBC-211ENST00000542416 GCOM1H8Y6P7 765 aaPredicted RBP10.38□□□□□ -0.75
UBC-211ENST00000542416 ZBTB5O15062 677 aa10.38□□□□□ -0.75
UBC-211ENST00000542416 RGS20O76081 388 aa10.38□□□□□ -0.75
UBC-211ENST00000542416 UPP2O95045 317 aa10.38□□□□□ -0.75
UBC-211ENST00000542416 POLR2MP0CAP2 368 aa10.38□□□□□ -0.75
UBC-211ENST00000542416 SMIM10L2AP0DMW4 78 aa10.38□□□□□ -0.75
UBC-211ENST00000542416 SMIM10L2BP0DMW5 78 aa10.38□□□□□ -0.75
UBC-211ENST00000542416 UBA1P22314 1058 aaKnown RBP10.38□□□□□ -0.75
UBC-211ENST00000542416 NHLH1Q02575 133 aa10.38□□□□□ -0.75
UBC-211ENST00000542416 NEDD9Q14511 834 aa10.38□□□□□ -0.75
UBC-211ENST00000542416 PGM5Q15124 567 aa10.38□□□□□ -0.75
UBC-211ENST00000542416 PKN1Q16512 942 aa10.38□□□□□ -0.75
UBC-211ENST00000542416 IMMTQ16891 758 aaKnown RBP10.38□□□□□ -0.75
UBC-211ENST00000542416 ENAHQ8N8S7 591 aaPredicted RBP10.38□□□□□ -0.75
UBC-211ENST00000542416 PRRX2Q99811 253 aa10.38□□□□□ -0.75
UBC-211ENST00000542416 RNPEPQ9H4A4 650 aa10.38□□□□□ -0.75
UBC-211ENST00000542416 TANC1Q9C0D5 1861 aa10.38□□□□□ -0.75
UBC-211ENST00000542416 SCN5AQ14524 2016 aa10.38□□□□□ -0.75
UBC-211ENST00000542416 KLRF2D3W0D1 207 aa10.37□□□□□ -0.75
UBC-211ENST00000542416 HIP1O00291 1037 aa10.37□□□□□ -0.75
UBC-211ENST00000542416 TREHO43280 583 aa10.37□□□□□ -0.75
UBC-211ENST00000542416 LGALS2P05162 132 aa10.37□□□□□ -0.75
UBC-211ENST00000542416 RPLP2P05387 115 aaKnown RBP10.37□□□□□ -0.75
UBC-211ENST00000542416 SDSP20132 328 aa10.37□□□□□ -0.75
UBC-211ENST00000542416 BMPR1AP36894 532 aa10.37□□□□□ -0.75
UBC-211ENST00000542416 SMAD2Q15796 467 aaKnown RBP10.37□□□□□ -0.75
UBC-211ENST00000542416 IFIT1BQ5T764 474 aaKnown RBP10.37□□□□□ -0.75
UBC-211ENST00000542416 TAF2Q6P1X5 1199 aa10.37□□□□□ -0.75
UBC-211ENST00000542416 METTL7BQ6UX53 244 aa10.37□□□□□ -0.75
UBC-211ENST00000542416 RSPH3Q86UC2 560 aa10.37□□□□□ -0.75
UBC-211ENST00000542416 RILPL2Q969X0 211 aa10.37□□□□□ -0.75
UBC-211ENST00000542416 MTMR8Q96EF0 704 aa10.37□□□□□ -0.75
UBC-211ENST00000542416 FBXL18Q96ME1 805 aa10.37□□□□□ -0.75
UBC-211ENST00000542416 PLVAPQ9BX97 442 aa10.37□□□□□ -0.75
UBC-211ENST00000542416 ZSWIM5Q9P217 1185 aa10.37□□□□□ -0.75
UBC-211ENST00000542416 LCTP09848 1927 aa10.37□□□□□ -0.75
UBC-211ENST00000542416 NRCAMQ92823 1304 aa10.36□□□□□ -0.75
UBC-211ENST00000542416 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.36□□□□□ -0.75
UBC-211ENST00000542416 B4E1Z4 1266 aa10.36□□□□□ -0.75
UBC-211ENST00000542416 CTSHP09668 335 aa10.36□□□□□ -0.75
UBC-211ENST00000542416 ICAM3P32942 547 aa10.36□□□□□ -0.75
UBC-211ENST00000542416 CTNNB1P35222 781 aa10.36□□□□□ -0.75
UBC-211ENST00000542416 SP2Q02086 613 aa10.36□□□□□ -0.75
UBC-211ENST00000542416 SMAD4Q13485 552 aaKnown RBP10.36□□□□□ -0.75
UBC-211ENST00000542416 HDAC1Q13547 482 aaPredicted RBP10.36□□□□□ -0.75
UBC-211ENST00000542416 HIC1Q14526 733 aa10.36□□□□□ -0.75
UBC-211ENST00000542416 CTC1Q2NKJ3 1217 aa10.36□□□□□ -0.75
UBC-211ENST00000542416 HERC4Q5GLZ8 1057 aaPredicted RBP10.36□□□□□ -0.75
UBC-211ENST00000542416 FAM26DQ5JW98 314 aa10.36□□□□□ -0.75
UBC-211ENST00000542416 FAM43BQ6ZT52 329 aaPredicted RBP10.36□□□□□ -0.75
UBC-211ENST00000542416 RPAINQ86UA6 219 aa10.36□□□□□ -0.75
UBC-211ENST00000542416 GIMAP8Q8ND71 665 aaPredicted RBP10.36□□□□□ -0.75
UBC-211ENST00000542416 DSCC1Q9BVC3 393 aa10.36□□□□□ -0.75
UBC-211ENST00000542416 DIAPH3Q9NSV4 1193 aa10.36□□□□□ -0.75
UBC-211ENST00000542416 OPLAHO14841 1288 aa10.35□□□□□ -0.75
UBC-211ENST00000542416 FIBPO43427 364 aa10.35□□□□□ -0.75
UBC-211ENST00000542416 SORBS3O60504 671 aa10.35□□□□□ -0.75
UBC-211ENST00000542416 HOXA13P31271 388 aaPredicted RBP10.35□□□□□ -0.75
UBC-211ENST00000542416 IRS1P35568 1242 aa10.35□□□□□ -0.75
UBC-211ENST00000542416 NAALADL2Q58DX5 795 aa10.35□□□□□ -0.75
UBC-211ENST00000542416 XRRA1Q6P2D8 792 aa10.35□□□□□ -0.75
UBC-211ENST00000542416 FCHSD1Q86WN1 690 aa10.35□□□□□ -0.75
UBC-211ENST00000542416 CLP1Q92989 425 aaKnown RBP10.35□□□□□ -0.75
UBC-211ENST00000542416 INPP4AQ96PE3 977 aaPredicted RBP10.35□□□□□ -0.75
UBC-211ENST00000542416 SENP7Q9BQF6 1050 aa10.35□□□□□ -0.75
UBC-211ENST00000542416 SETD4Q9NVD3 440 aa10.35□□□□□ -0.75
UBC-211ENST00000542416 PNMA6FA0A0J9YX94 578 aa10.34□□□□□ -0.75
UBC-211ENST00000542416 PALM3A6NDB9 673 aaPredicted RBP10.34□□□□□ -0.75
UBC-211ENST00000542416 SPATA31C2B4DYI2 1134 aa10.34□□□□□ -0.75
UBC-211ENST00000542416 MBTPS2O43462 519 aa10.34□□□□□ -0.75
UBC-211ENST00000542416 LTBRP36941 435 aa10.34□□□□□ -0.75
UBC-211ENST00000542416 ADAM17P78536 824 aa10.34□□□□□ -0.75
UBC-211ENST00000542416 ARHGAP4P98171 946 aa10.34□□□□□ -0.75
UBC-211ENST00000542416 TRDNQ13061 729 aa10.34□□□□□ -0.75
UBC-211ENST00000542416 AAMPQ13685 434 aa10.34□□□□□ -0.75
UBC-211ENST00000542416 CWC27Q6UX04 472 aaKnown RBP10.34□□□□□ -0.75
UBC-211ENST00000542416 HFE2Q6ZVN8 426 aa10.34□□□□□ -0.75
UBC-211ENST00000542416 CYFIP1Q7L576 1253 aa10.34□□□□□ -0.75
UBC-211ENST00000542416 BMP8AQ7Z5Y6 402 aa10.34□□□□□ -0.75
UBC-211ENST00000542416 NLRX1Q86UT6 975 aa10.34□□□□□ -0.75
UBC-211ENST00000542416 STAG2Q8N3U4 1231 aa10.34□□□□□ -0.75
UBC-211ENST00000542416 EDAQ92838 391 aa10.34□□□□□ -0.75
UBC-211ENST00000542416 TNPO1Q92973 898 aaKnown RBP10.34□□□□□ -0.75
UBC-211ENST00000542416 P2RX5Q93086 422 aa10.34□□□□□ -0.75
UBC-211ENST00000542416 GPR20Q99678 358 aa10.34□□□□□ -0.75
UBC-211ENST00000542416 RIOX1Q9H6W3 641 aa10.34□□□□□ -0.75
UBC-211ENST00000542416 MAD2L2Q9UI95 211 aa10.34□□□□□ -0.75
UBC-211ENST00000542416 CD207Q9UJ71 328 aa10.34□□□□□ -0.75
UBC-211ENST00000542416 COL4A6Q14031 1691 aa10.34□□□□□ -0.75
UBC-211ENST00000542416 ADGRA3Q8IWK6 1321 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms