RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 GPR20Q99678 358 aa22.92■■□□□ 1.26
CACNA2D4-215ENST00000542340 C16orf70Q9BSU1 422 aa22.92■■□□□ 1.26
CACNA2D4-215ENST00000542340 C22orf23Q9BZE7 217 aa22.92■■□□□ 1.26
CACNA2D4-215ENST00000542340 STK36Q9NRP7 1315 aa22.91■■□□□ 1.26
CACNA2D4-215ENST00000542340 MEIS1O00470 390 aa22.91■■□□□ 1.26
CACNA2D4-215ENST00000542340 CYP3A4P08684 503 aa22.91■■□□□ 1.26
CACNA2D4-215ENST00000542340 RBM25P49756 843 aaKnown RBP22.91■■□□□ 1.26
CACNA2D4-215ENST00000542340 FXR1P51114 621 aaKnown RBP eCLIP22.91■■□□□ 1.26
CACNA2D4-215ENST00000542340 CHMP4BP1P59074 171 aa22.91■■□□□ 1.26
CACNA2D4-215ENST00000542340 FPGSQ05932 587 aa22.91■■□□□ 1.26
CACNA2D4-215ENST00000542340 MFSD10Q14728 455 aa22.91■■□□□ 1.26
CACNA2D4-215ENST00000542340 ME3Q16798 604 aa22.91■■□□□ 1.26
CACNA2D4-215ENST00000542340 NIPA1Q7RTP0 329 aa22.91■■□□□ 1.26
CACNA2D4-215ENST00000542340 CYP2W1Q8TAV3 490 aa22.91■■□□□ 1.26
CACNA2D4-215ENST00000542340 PPP1R12CQ9BZL4 782 aa22.91■■□□□ 1.26
CACNA2D4-215ENST00000542340 HIPK3Q9H422 1215 aa22.91■■□□□ 1.26
CACNA2D4-215ENST00000542340 KCNH7Q9NS40 1196 aa22.91■■□□□ 1.26
CACNA2D4-215ENST00000542340 CTDNEP1O95476 244 aa22.9■■□□□ 1.26
CACNA2D4-215ENST00000542340 ZNF76P36508 570 aa22.9■■□□□ 1.26
CACNA2D4-215ENST00000542340 KIAA0753Q2KHM9 967 aa22.9■■□□□ 1.26
CACNA2D4-215ENST00000542340 GALNT17Q6IS24 598 aa22.9■■□□□ 1.26
CACNA2D4-215ENST00000542340 TMEM199Q8N511 208 aa22.9■■□□□ 1.26
CACNA2D4-215ENST00000542340 C7orf31Q8N865 590 aa22.9■■□□□ 1.26
CACNA2D4-215ENST00000542340 PPP1R13LQ8WUF5 828 aa22.9■■□□□ 1.26
CACNA2D4-215ENST00000542340 GTF3C6Q969F1 213 aa22.9■■□□□ 1.26
CACNA2D4-215ENST00000542340 KIF2CQ99661 725 aa22.9■■□□□ 1.26
CACNA2D4-215ENST00000542340 NOC4LQ9BVI4 516 aaKnown RBP22.9■■□□□ 1.26
CACNA2D4-215ENST00000542340 H3BRB1 525 aa22.89■■□□□ 1.25
CACNA2D4-215ENST00000542340 LARGE1O95461 756 aa22.89■■□□□ 1.25
CACNA2D4-215ENST00000542340 LGALS2P05162 132 aa22.89■■□□□ 1.25
CACNA2D4-215ENST00000542340 LRIT3Q3SXY7 679 aa22.89■■□□□ 1.25
CACNA2D4-215ENST00000542340 NECAB1Q8N987 351 aa22.89■■□□□ 1.25
CACNA2D4-215ENST00000542340 RASGRP4Q8TDF6 673 aa22.89■■□□□ 1.25
CACNA2D4-215ENST00000542340 AIFM3Q96NN9 605 aa22.89■■□□□ 1.25
CACNA2D4-215ENST00000542340 ALG1Q9BT22 464 aa22.89■■□□□ 1.25
CACNA2D4-215ENST00000542340 TUT1Q9H6E5 874 aaKnown RBP22.89■■□□□ 1.25
CACNA2D4-215ENST00000542340 PCDHA4Q9UN74 947 aa22.89■■□□□ 1.25
CACNA2D4-215ENST00000542340 ARP10275 920 aa22.88■■□□□ 1.25
CACNA2D4-215ENST00000542340 CYP2C9P11712 490 aa22.88■■□□□ 1.25
CACNA2D4-215ENST00000542340 CYP2C18P33260 490 aa22.88■■□□□ 1.25
CACNA2D4-215ENST00000542340 PTGISQ16647 500 aa22.88■■□□□ 1.25
CACNA2D4-215ENST00000542340 DAGLBQ8NCG7 672 aa22.88■■□□□ 1.25
CACNA2D4-215ENST00000542340 SEPT1Q8WYJ6 367 aa22.88■■□□□ 1.25
CACNA2D4-215ENST00000542340 HDAC6Q9UBN7 1215 aa22.88■■□□□ 1.25
CACNA2D4-215ENST00000542340 GTF2IRD1Q9UHL9 959 aa22.88■■□□□ 1.25
CACNA2D4-215ENST00000542340 FAM86B1E9PN63 330 aa22.87■■□□□ 1.25
CACNA2D4-215ENST00000542340 FAM86B2P0C5J1 330 aa22.87■■□□□ 1.25
CACNA2D4-215ENST00000542340 XBP1P17861 261 aa22.87■■□□□ 1.25
CACNA2D4-215ENST00000542340 EPHB4P54760 987 aa22.87■■□□□ 1.25
CACNA2D4-215ENST00000542340 SP4Q02446 784 aa22.87■■□□□ 1.25
CACNA2D4-215ENST00000542340 PPIGQ13427 754 aaKnown RBP eCLIP22.87■■□□□ 1.251e-9■■□□□ 14
CACNA2D4-215ENST00000542340 SHHQ15465 462 aa22.87■■□□□ 1.25
CACNA2D4-215ENST00000542340 GDF6Q6KF10 455 aaPredicted RBP22.87■■□□□ 1.25
CACNA2D4-215ENST00000542340 BLIDQ8IZY5 108 aa22.87■■□□□ 1.25
CACNA2D4-215ENST00000542340 WASF1Q92558 559 aa22.87■■□□□ 1.25
CACNA2D4-215ENST00000542340 UPF2Q9HAU5 1272 aaKnown RBP22.87■■□□□ 1.25
CACNA2D4-215ENST00000542340 AGO4Q9HCK5 861 aaKnown RBP22.87■■□□□ 1.25
CACNA2D4-215ENST00000542340 PKD2L1Q9P0L9 805 aa22.87■■□□□ 1.25
CACNA2D4-215ENST00000542340 ORC3Q9UBD5 711 aaPredicted RBP22.87■■□□□ 1.25
CACNA2D4-215ENST00000542340 LIMCH1Q9UPQ0 1083 aa22.87■■□□□ 1.25
CACNA2D4-215ENST00000542340 NOD1Q9Y239 953 aa22.87■■□□□ 1.25
CACNA2D4-215ENST00000542340 TELO2Q9Y4R8 837 aa22.87■■□□□ 1.25
CACNA2D4-215ENST00000542340 NFASCO94856 1347 aa22.86■■□□□ 1.25
CACNA2D4-215ENST00000542340 UMODL1Q5DID0 1318 aa22.86■■□□□ 1.25
CACNA2D4-215ENST00000542340 IGLV3-22A0A075B6J6 115 aa22.86■■□□□ 1.25
CACNA2D4-215ENST00000542340 CSF2RAP15509 400 aa22.86■■□□□ 1.25
CACNA2D4-215ENST00000542340 CIITAP33076 1130 aa22.86■■□□□ 1.25
CACNA2D4-215ENST00000542340 NPY5RQ15761 445 aa22.86■■□□□ 1.25
CACNA2D4-215ENST00000542340 PLA2G4DQ86XP0 818 aa22.86■■□□□ 1.25
CACNA2D4-215ENST00000542340 SDF4Q9BRK5 362 aa22.86■■□□□ 1.25
CACNA2D4-215ENST00000542340 JPH1Q9HDC5 661 aaPredicted RBP22.86■■□□□ 1.25
CACNA2D4-215ENST00000542340 ZNF215Q9UL58 517 aaPredicted RBP22.86■■□□□ 1.25
CACNA2D4-215ENST00000542340 GSTTP1A0A1W2PQM5 241 aa22.85■■□□□ 1.25
CACNA2D4-215ENST00000542340 M0R2N6 131 aa22.85■■□□□ 1.25
CACNA2D4-215ENST00000542340 TCF7P36402 384 aaPredicted RBP22.85■■□□□ 1.25
CACNA2D4-215ENST00000542340 USP11P51784 963 aa22.85■■□□□ 1.25
CACNA2D4-215ENST00000542340 C9orf50Q5SZB4 431 aa22.85■■□□□ 1.25
CACNA2D4-215ENST00000542340 CTAGE1Q96RT6 745 aa22.85■■□□□ 1.25
CACNA2D4-215ENST00000542340 PHF20Q9BVI0 1012 aa22.85■■□□□ 1.25
CACNA2D4-215ENST00000542340 WNT8AQ9H1J5 351 aa22.85■■□□□ 1.25
CACNA2D4-215ENST00000542340 SLC9A2Q9UBY0 812 aa22.85■■□□□ 1.25
CACNA2D4-215ENST00000542340 DOCK5Q9H7D0 1870 aa22.84■■□□□ 1.25
CACNA2D4-215ENST00000542340 PITPNM1O00562 1244 aa22.84■■□□□ 1.25
CACNA2D4-215ENST00000542340 FDPSP14324 419 aaKnown RBP22.84■■□□□ 1.25
CACNA2D4-215ENST00000542340 CCL23P55773 120 aa22.84■■□□□ 1.25
CACNA2D4-215ENST00000542340 SETQ01105 290 aaPredicted RBP22.84■■□□□ 1.25
CACNA2D4-215ENST00000542340 ITGB3BPQ13352 177 aaPredicted RBP22.84■■□□□ 1.25
CACNA2D4-215ENST00000542340 BFSP2Q13515 415 aa22.84■■□□□ 1.25
CACNA2D4-215ENST00000542340 UTP14CQ5TAP6 766 aaKnown RBP22.84■■□□□ 1.25
CACNA2D4-215ENST00000542340 NSUN7Q8NE18 718 aaKnown RBP22.84■■□□□ 1.25
CACNA2D4-215ENST00000542340 KCNJ14Q9UNX9 436 aa22.84■■□□□ 1.25
CACNA2D4-215ENST00000542340 C16orf59Q7L2K0 433 aa22.83■■□□□ 1.25
CACNA2D4-215ENST00000542340 TRIM50Q86XT4 487 aa22.83■■□□□ 1.25
CACNA2D4-215ENST00000542340 CCDC155Q8N6L0 562 aa22.83■■□□□ 1.25
CACNA2D4-215ENST00000542340 RETREG2Q8NC44 543 aa22.83■■□□□ 1.25
CACNA2D4-215ENST00000542340 IL27Q8NEV9 243 aa22.83■■□□□ 1.25
CACNA2D4-215ENST00000542340 CAGE1Q8TC20 777 aa22.83■■□□□ 1.25
CACNA2D4-215ENST00000542340 ZSCAN31Q96LW9 406 aaPredicted RBP22.83■■□□□ 1.25
CACNA2D4-215ENST00000542340 IL23AQ9NPF7 189 aa22.83■■□□□ 1.25
CACNA2D4-215ENST00000542340 IPO5O00410 1097 aaKnown RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms