RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 REC8O95072 547 aa23.21■■□□□ 1.31
DDB1-220ENST00000542337 RCAN1P53805 252 aa23.21■■□□□ 1.31
DDB1-220ENST00000542337 NAPAP54920 295 aa23.21■■□□□ 1.31
DDB1-220ENST00000542337 UBE2SQ16763 222 aa23.21■■□□□ 1.31
DDB1-220ENST00000542337 PPP2R2DQ66LE6 453 aa23.21■■□□□ 1.31
DDB1-220ENST00000542337 DHX38Q92620 1227 aaKnown RBP23.21■■□□□ 1.31
DDB1-220ENST00000542337 GPR20Q99678 358 aa23.21■■□□□ 1.31
DDB1-220ENST00000542337 PRDM12Q9H4Q4 367 aa23.21■■□□□ 1.31
DDB1-220ENST00000542337 BRPF3Q9ULD4 1205 aa23.21■■□□□ 1.31
DDB1-220ENST00000542337 PCDHA6Q9UN73 950 aa23.21■■□□□ 1.31
DDB1-220ENST00000542337 YBX2Q9Y2T7 364 aaKnown RBP23.21■■□□□ 1.31
DDB1-220ENST00000542337 PCDHA8Q9Y5H6 950 aa23.21■■□□□ 1.31
DDB1-220ENST00000542337 V9GY48 417 aaPredicted RBP23.21■■□□□ 1.31
DDB1-220ENST00000542337 SEMA3FQ13275 785 aa23.2■■□□□ 1.3
DDB1-220ENST00000542337 UTP14CQ5TAP6 766 aaKnown RBP23.2■■□□□ 1.3
DDB1-220ENST00000542337 PPP1R18Q6NYC8 613 aa23.2■■□□□ 1.3
DDB1-220ENST00000542337 ATP6V0A1Q93050 837 aa23.2■■□□□ 1.3
DDB1-220ENST00000542337 GLT8D2Q9H1C3 349 aa23.2■■□□□ 1.3
DDB1-220ENST00000542337 BCAS3Q9H6U6 928 aa23.2■■□□□ 1.3
DDB1-220ENST00000542337 hCG_1984214I3L0E3 225 aa23.19■■□□□ 1.3
DDB1-220ENST00000542337 MAFGO15525 162 aa23.19■■□□□ 1.3
DDB1-220ENST00000542337 SMIM10L2AP0DMW4 78 aa23.19■■□□□ 1.3
DDB1-220ENST00000542337 SMIM10L2BP0DMW5 78 aa23.19■■□□□ 1.3
DDB1-220ENST00000542337 ZNF200P98182 395 aaPredicted RBP23.19■■□□□ 1.3
DDB1-220ENST00000542337 SP4Q02446 784 aa23.19■■□□□ 1.3
DDB1-220ENST00000542337 CNKSR3Q6P9H4 555 aa23.19■■□□□ 1.3
DDB1-220ENST00000542337 BLOC1S2Q6QNY1 142 aa23.19■■□□□ 1.3
DDB1-220ENST00000542337 ZNF713Q8N859 430 aaPredicted RBP23.19■■□□□ 1.3
DDB1-220ENST00000542337 JAKMIP1Q96N16 626 aaKnown RBP23.19■■□□□ 1.3
DDB1-220ENST00000542337 CNTNAP5Q8WYK1 1306 aa23.18■■□□□ 1.3
DDB1-220ENST00000542337 EFCAB14O75071 495 aa23.18■■□□□ 1.3
DDB1-220ENST00000542337 FOSP01100 380 aaPredicted RBP23.18■■□□□ 1.3
DDB1-220ENST00000542337 HSPA4P34932 840 aa23.18■■□□□ 1.3
DDB1-220ENST00000542337 THPOP40225 353 aa23.18■■□□□ 1.3
DDB1-220ENST00000542337 ADCY7P51828 1080 aa23.18■■□□□ 1.3
DDB1-220ENST00000542337 MTMR1Q13613 665 aa23.18■■□□□ 1.3
DDB1-220ENST00000542337 ZNF618Q5T7W0 954 aa23.18■■□□□ 1.3
DDB1-220ENST00000542337 WWC2Q6AWC2 1192 aa23.18■■□□□ 1.3
DDB1-220ENST00000542337 SERINC5Q86VE9 423 aa23.18■■□□□ 1.3
DDB1-220ENST00000542337 KCNB2Q92953 911 aa23.18■■□□□ 1.3
DDB1-220ENST00000542337 RIC8AQ9NPQ8 531 aa23.18■■□□□ 1.3
DDB1-220ENST00000542337 EMSYQ7Z589 1322 aa23.17■■□□□ 1.3
DDB1-220ENST00000542337 ABHD14A-ACY1A0A1B0GW23 586 aa23.17■■□□□ 1.3
DDB1-220ENST00000542337 CXCL10P02778 98 aa23.17■■□□□ 1.3
DDB1-220ENST00000542337 MYOGP15173 224 aa23.17■■□□□ 1.3
DDB1-220ENST00000542337 IGFBP4P22692 258 aa23.17■■□□□ 1.3
DDB1-220ENST00000542337 PSMA5P28066 241 aa23.17■■□□□ 1.3
DDB1-220ENST00000542337 METAP2P50579 478 aaKnown RBP eCLIP23.17■■□□□ 1.31e-6■■■■■ 26.8
DDB1-220ENST00000542337 IKBKEQ14164 716 aa23.17■■□□□ 1.3
DDB1-220ENST00000542337 TRIM71Q2Q1W2 868 aaKnown RBP23.17■■□□□ 1.3
DDB1-220ENST00000542337 Q6ZUG5 572 aa23.17■■□□□ 1.3
DDB1-220ENST00000542337 HERC6Q8IVU3 1022 aa23.17■■□□□ 1.3
DDB1-220ENST00000542337 JADE2Q9NQC1 790 aa23.17■■□□□ 1.3
DDB1-220ENST00000542337 UBIAD1Q9Y5Z9 338 aa23.17■■□□□ 1.3
DDB1-220ENST00000542337 A0A0C4DFX4 3053 aa23.17■■□□□ 1.3
DDB1-220ENST00000542337 MYH7BA7E2Y1 1941 aa23.17■■□□□ 1.3
DDB1-220ENST00000542337 RSPH10B2B2RC85 870 aa23.16■■□□□ 1.3
DDB1-220ENST00000542337 NBNO60934 754 aa23.16■■□□□ 1.3
DDB1-220ENST00000542337 RSPH10BP0C881 870 aa23.16■■□□□ 1.3
DDB1-220ENST00000542337 ITGB5P18084 799 aa23.16■■□□□ 1.3
DDB1-220ENST00000542337 SEPT1Q8WYJ6 367 aa23.16■■□□□ 1.3
DDB1-220ENST00000542337 ZBED2Q9BTP6 218 aa23.16■■□□□ 1.3
DDB1-220ENST00000542337 RNPEPQ9H4A4 650 aa23.16■■□□□ 1.3
DDB1-220ENST00000542337 BARHL2Q9NY43 387 aa23.16■■□□□ 1.3
DDB1-220ENST00000542337 SNX14Q9Y5W7 946 aa23.16■■□□□ 1.3
DDB1-220ENST00000542337 SMCO2A6NFE2 343 aa23.15■■□□□ 1.3
DDB1-220ENST00000542337 KCNA2P16389 499 aa23.15■■□□□ 1.3
DDB1-220ENST00000542337 FUT2Q10981 343 aa23.15■■□□□ 1.3
DDB1-220ENST00000542337 STXBP3O00186 592 aa23.14■■□□□ 1.29
DDB1-220ENST00000542337 TREHO43280 583 aa23.14■■□□□ 1.29
DDB1-220ENST00000542337 TLL1O43897 1013 aa23.14■■□□□ 1.29
DDB1-220ENST00000542337 ATP9AO75110 1047 aa23.14■■□□□ 1.29
DDB1-220ENST00000542337 CAND2O75155 1236 aa23.14■■□□□ 1.29
DDB1-220ENST00000542337 CA3P07451 260 aa23.14■■□□□ 1.29
DDB1-220ENST00000542337 TCF7P36402 384 aaPredicted RBP23.14■■□□□ 1.29
DDB1-220ENST00000542337 WDR5P61964 334 aaKnown RBP23.14■■□□□ 1.29
DDB1-220ENST00000542337 APOBRQ0VD83 1088 aa23.14■■□□□ 1.29
DDB1-220ENST00000542337 HIC1Q14526 733 aa23.14■■□□□ 1.29
DDB1-220ENST00000542337 GPNMBQ14956 572 aa23.14■■□□□ 1.29
DDB1-220ENST00000542337 BRF1Q92994 677 aa23.14■■□□□ 1.29
DDB1-220ENST00000542337 SETD4Q9NVD3 440 aa23.14■■□□□ 1.29
DDB1-220ENST00000542337 PKD2L1Q9P0L9 805 aa23.14■■□□□ 1.29
DDB1-220ENST00000542337 NRCAMQ92823 1304 aa23.13■■□□□ 1.29
DDB1-220ENST00000542337 LGR5O75473 907 aa23.13■■□□□ 1.29
DDB1-220ENST00000542337 CPA1P15085 419 aa23.13■■□□□ 1.29
DDB1-220ENST00000542337 CDC27P30260 824 aa23.13■■□□□ 1.29
DDB1-220ENST00000542337 HOXC8P31273 242 aa23.13■■□□□ 1.29
DDB1-220ENST00000542337 ADD1P35611 737 aaKnown RBP23.13■■□□□ 1.29
DDB1-220ENST00000542337 ARHGAP4P98171 946 aa23.13■■□□□ 1.29
DDB1-220ENST00000542337 AKAP17AQ02040 695 aaKnown RBP23.13■■□□□ 1.29
DDB1-220ENST00000542337 AP3B2Q13367 1082 aa23.13■■□□□ 1.29
DDB1-220ENST00000542337 TRIM50Q86XT4 487 aa23.13■■□□□ 1.29
DDB1-220ENST00000542337 CCDC12Q8WUD4 166 aaPredicted RBP23.13■■□□□ 1.29
DDB1-220ENST00000542337 PPM1EQ8WY54 764 aa23.13■■□□□ 1.29
DDB1-220ENST00000542337 GLG1Q92896 1179 aa23.13■■□□□ 1.29
DDB1-220ENST00000542337 WNT8BQ93098 351 aa23.13■■□□□ 1.29
DDB1-220ENST00000542337 MXRA8Q9BRK3 442 aa23.13■■□□□ 1.29
DDB1-220ENST00000542337 SDF4Q9BRK5 362 aa23.13■■□□□ 1.29
DDB1-220ENST00000542337 SMARCAD1Q9H4L7 1026 aa23.13■■□□□ 1.29
DDB1-220ENST00000542337 FAM217BQ9NTX9 383 aaPredicted RBP23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms