RNA–Protein interactions for RNA: ENST00000542113.1

NKRF-204, Transcript of NFKB repressing factor, humanhuman

TSL 3 BASIC

Gene NKRF, Length 3,351 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKRF-204ENST00000542113 ZBTB5O15062 677 aa7.47□□□□□ -1.21
NKRF-204ENST00000542113 ZMYND10O75800 440 aa7.47□□□□□ -1.21
NKRF-204ENST00000542113 HMGB2P26583 209 aaKnown RBP7.47□□□□□ -1.21
NKRF-204ENST00000542113 USP11P51784 963 aa7.47□□□□□ -1.21
NKRF-204ENST00000542113 SKOR1P84550 965 aa7.47□□□□□ -1.21
NKRF-204ENST00000542113 KLHL30Q0D2K2 578 aa7.47□□□□□ -1.21
NKRF-204ENST00000542113 AP3B2Q13367 1082 aa7.47□□□□□ -1.21
NKRF-204ENST00000542113 HGSNATQ68CP4 663 aa7.47□□□□□ -1.21
NKRF-204ENST00000542113 B4GALNT4Q76KP1 1039 aa7.47□□□□□ -1.21
NKRF-204ENST00000542113 TEX2Q8IWB9 1127 aa7.47□□□□□ -1.21
NKRF-204ENST00000542113 ZC3H3Q8IXZ2 948 aaKnown RBP7.47□□□□□ -1.21
NKRF-204ENST00000542113 LMBR1Q8WVP7 490 aa7.47□□□□□ -1.21
NKRF-204ENST00000542113 ARHGEF1Q92888 912 aaKnown RBP7.47□□□□□ -1.21
NKRF-204ENST00000542113 DNAJC19Q96DA6 116 aa7.47□□□□□ -1.21
NKRF-204ENST00000542113 PBKQ96KB5 322 aa7.47□□□□□ -1.21
NKRF-204ENST00000542113 CCDC17Q96LX7 622 aa7.47□□□□□ -1.21
NKRF-204ENST00000542113 TLR10Q9BXR5 811 aa7.47□□□□□ -1.21
NKRF-204ENST00000542113 UBA5Q9GZZ9 404 aa7.47□□□□□ -1.21
NKRF-204ENST00000542113 CPVLQ9H3G5 476 aa7.47□□□□□ -1.21
NKRF-204ENST00000542113 AIPL1Q9NZN9 384 aa7.47□□□□□ -1.21
NKRF-204ENST00000542113 A0A087WUV0 522 aaPredicted RBP7.46□□□□□ -1.21
NKRF-204ENST00000542113 IGKV6D-41A0A0C4DH26 115 aa7.46□□□□□ -1.21
NKRF-204ENST00000542113 GOLGA6L10A6NI86 522 aa7.46□□□□□ -1.21
NKRF-204ENST00000542113 AGPSO00116 658 aa7.46□□□□□ -1.21
NKRF-204ENST00000542113 EPHB6O15197 1021 aa7.46□□□□□ -1.21
NKRF-204ENST00000542113 MYBL2P10244 700 aa7.46□□□□□ -1.21
NKRF-204ENST00000542113 SLC1A4P43007 532 aa7.46□□□□□ -1.21
NKRF-204ENST00000542113 CLK2P49760 499 aaKnown RBP7.46□□□□□ -1.21
NKRF-204ENST00000542113 GFPT1Q06210 699 aaPredicted RBP7.46□□□□□ -1.21
NKRF-204ENST00000542113 VPS72Q15906 364 aa7.46□□□□□ -1.21
NKRF-204ENST00000542113 TTC31Q49AM3 519 aaPredicted RBP7.46□□□□□ -1.21
NKRF-204ENST00000542113 KLHDC7AQ5VTJ3 777 aa7.46□□□□□ -1.21
NKRF-204ENST00000542113 MICALCLQ6ZW33 695 aa7.46□□□□□ -1.21
NKRF-204ENST00000542113 ARFGAP2Q8N6H7 521 aa7.46□□□□□ -1.21
NKRF-204ENST00000542113 SMCR8Q8TEV9 937 aaPredicted RBP7.46□□□□□ -1.21
NKRF-204ENST00000542113 HPS3Q969F9 1004 aa7.46□□□□□ -1.21
NKRF-204ENST00000542113 COA7Q96BR5 231 aa7.46□□□□□ -1.21
NKRF-204ENST00000542113 METTL14Q9HCE5 456 aaKnown RBP7.46□□□□□ -1.21
NKRF-204ENST00000542113 PLCB1Q9NQ66 1216 aa7.46□□□□□ -1.21
NKRF-204ENST00000542113 GDF3Q9NR23 364 aa7.46□□□□□ -1.21
NKRF-204ENST00000542113 DMGDHQ9UI17 866 aaKnown RBP7.46□□□□□ -1.21
NKRF-204ENST00000542113 ATXN2Q99700 1313 aaKnown RBP7.46□□□□□ -1.21
NKRF-204ENST00000542113 SRRM3A6NNA2 597 aaPredicted RBP7.46□□□□□ -1.22
NKRF-204ENST00000542113 TBX3O15119 743 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 EIF3HO15372 352 aaKnown RBP eCLIP7.46□□□□□ -1.22
NKRF-204ENST00000542113 FLOT1O75955 427 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 SSBP05455 408 aaKnown RBP eCLIP7.46□□□□□ -1.22
NKRF-204ENST00000542113 PLA2G4BP0C869 781 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 RPL13P26373 211 aaKnown RBP7.46□□□□□ -1.22
NKRF-204ENST00000542113 MATR3P43243 847 aaKnown RBP eCLIP7.46□□□□□ -1.22
NKRF-204ENST00000542113 POLR2FP61218 127 aaKnown RBP7.46□□□□□ -1.22
NKRF-204ENST00000542113 RAPGEF1Q13905 1077 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 FAM98CQ17RN3 349 aaKnown RBP7.46□□□□□ -1.22
NKRF-204ENST00000542113 HERC4Q5GLZ8 1057 aaPredicted RBP7.46□□□□□ -1.22
NKRF-204ENST00000542113 FRMD5Q7Z6J6 570 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 GPBP1Q86WP2 473 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 CD302Q8IX05 232 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 GSPT2Q8IYD1 628 aaKnown RBP7.46□□□□□ -1.22
NKRF-204ENST00000542113 TRIM34Q9BYJ4 488 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 PSTPIP2Q9H939 334 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 NLRC4Q9NPP4 1024 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 SERPINB13Q9UIV8 391 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 DAAM1Q9Y4D1 1078 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 FRMPD2Q68DX3 1309 aaPredicted RBP7.46□□□□□ -1.22
NKRF-204ENST00000542113 UTRNP46939 3433 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 CALUO43852 315 aaPredicted RBP7.46□□□□□ -1.22
NKRF-204ENST00000542113 GPSM2P81274 684 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 GABPAQ06546 454 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 KCNMA1Q12791 1236 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 CUL1Q13616 776 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 NFIXQ14938 502 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 SYCE1Q8N0S2 351 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 LRRC45Q96CN5 670 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 MTMR8Q96EF0 704 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 CALR3Q96L12 384 aaKnown RBP7.46□□□□□ -1.22
NKRF-204ENST00000542113 SPAG5Q96R06 1193 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 JMJD4Q9H9V9 463 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 EMILIN3Q9NT22 766 aa7.46□□□□□ -1.22
NKRF-204ENST00000542113 PPP1R12BO60237 982 aaPredicted RBP7.45□□□□□ -1.22
NKRF-204ENST00000542113 ZEB2O60315 1214 aa7.45□□□□□ -1.22
NKRF-204ENST00000542113 GFPT2O94808 682 aa7.45□□□□□ -1.22
NKRF-204ENST00000542113 HEXIM1O94992 359 aaKnown RBP7.45□□□□□ -1.22
NKRF-204ENST00000542113 USP8P40818 1118 aa7.45□□□□□ -1.22
NKRF-204ENST00000542113 IRAK1P51617 712 aa7.45□□□□□ -1.22
NKRF-204ENST00000542113 ADAM9Q13443 819 aa7.45□□□□□ -1.22
NKRF-204ENST00000542113 RPS6KA1Q15418 735 aa7.45□□□□□ -1.22
NKRF-204ENST00000542113 KIAA0753Q2KHM9 967 aa7.45□□□□□ -1.22
NKRF-204ENST00000542113 CRY2Q49AN0 593 aa7.45□□□□□ -1.22
NKRF-204ENST00000542113 MEI1Q5TIA1 1274 aa7.45□□□□□ -1.22
NKRF-204ENST00000542113 DPP8Q6V1X1 898 aaPredicted RBP7.45□□□□□ -1.22
NKRF-204ENST00000542113 ADGRF4Q8IZF3 695 aa7.45□□□□□ -1.22
NKRF-204ENST00000542113 LRRC47Q8N1G4 583 aaKnown RBP7.45□□□□□ -1.22
NKRF-204ENST00000542113 TBC1D5Q92609 795 aa7.45□□□□□ -1.22
NKRF-204ENST00000542113 GDAP1L1Q96MZ0 367 aa7.45□□□□□ -1.22
NKRF-204ENST00000542113 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.45□□□□□ -1.22
NKRF-204ENST00000542113 GPCPD1Q9NPB8 672 aa7.45□□□□□ -1.22
NKRF-204ENST00000542113 RBM12Q9NTZ6 932 aaKnown RBP7.45□□□□□ -1.22
NKRF-204ENST00000542113 ARMCX3Q9UH62 379 aaPredicted RBP7.45□□□□□ -1.22
NKRF-204ENST00000542113 FBXL5Q9UKA1 691 aa7.45□□□□□ -1.22
NKRF-204ENST00000542113 CYP3A7-CYP3A51PA0A087WV96 503 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms