RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 PKD2L1Q9P0L9 805 aa11.13□□□□□ -0.63
YBX3-212ENST00000542002 IGLV3-22A0A075B6J6 115 aa11.12□□□□□ -0.63
YBX3-212ENST00000542002 HAS3O00219 553 aa11.12□□□□□ -0.63
YBX3-212ENST00000542002 CD2BP2O95400 341 aaKnown RBP11.12□□□□□ -0.63
YBX3-212ENST00000542002 CYP3A4P08684 503 aa11.12□□□□□ -0.63
YBX3-212ENST00000542002 GNA11P29992 359 aa11.12□□□□□ -0.63
YBX3-212ENST00000542002 BMP8BP34820 402 aa11.12□□□□□ -0.63
YBX3-212ENST00000542002 FXR2P51116 673 aaKnown RBP eCLIP11.12□□□□□ -0.63
YBX3-212ENST00000542002 NLRP5P59047 1200 aa11.12□□□□□ -0.63
YBX3-212ENST00000542002 CHMP4BP1P59074 171 aa11.12□□□□□ -0.63
YBX3-212ENST00000542002 ITGB3BPQ13352 177 aaPredicted RBP11.12□□□□□ -0.63
YBX3-212ENST00000542002 AP3B2Q13367 1082 aa11.12□□□□□ -0.63
YBX3-212ENST00000542002 MTMR1Q13613 665 aa11.12□□□□□ -0.63
YBX3-212ENST00000542002 NEDD9Q14511 834 aa11.12□□□□□ -0.63
YBX3-212ENST00000542002 CEP55Q53EZ4 464 aa11.12□□□□□ -0.63
YBX3-212ENST00000542002 BRDTQ58F21 947 aaPredicted RBP11.12□□□□□ -0.63
YBX3-212ENST00000542002 METTL7BQ6UX53 244 aa11.12□□□□□ -0.63
YBX3-212ENST00000542002 REXO1Q8N1G1 1221 aaKnown RBP11.12□□□□□ -0.63
YBX3-212ENST00000542002 NSUN7Q8NE18 718 aaKnown RBP11.12□□□□□ -0.63
YBX3-212ENST00000542002 OXER1Q8TDS5 423 aa11.12□□□□□ -0.63
YBX3-212ENST00000542002 GLT8D2Q9H1C3 349 aa11.12□□□□□ -0.63
YBX3-212ENST00000542002 FOXD4L1Q9NU39 408 aa11.12□□□□□ -0.63
YBX3-212ENST00000542002 PCDHA4Q9UN74 947 aa11.12□□□□□ -0.63
YBX3-212ENST00000542002 LIMCH1Q9UPQ0 1083 aa11.12□□□□□ -0.63
YBX3-212ENST00000542002 LAMA3Q16787 3333 aa11.12□□□□□ -0.63
YBX3-212ENST00000542002 UMODL1Q5DID0 1318 aa11.11□□□□□ -0.63
YBX3-212ENST00000542002 GSTTP1A0A1W2PQM5 241 aa11.11□□□□□ -0.63
YBX3-212ENST00000542002 TIMP1P01033 207 aa11.11□□□□□ -0.63
YBX3-212ENST00000542002 CYP2C9P11712 490 aa11.11□□□□□ -0.63
YBX3-212ENST00000542002 CYP2C18P33260 490 aa11.11□□□□□ -0.63
YBX3-212ENST00000542002 PSEN2P49810 448 aa11.11□□□□□ -0.63
YBX3-212ENST00000542002 ZNF200P98182 395 aaPredicted RBP11.11□□□□□ -0.63
YBX3-212ENST00000542002 SP4Q02446 784 aa11.11□□□□□ -0.63
YBX3-212ENST00000542002 NFRKBQ6P4R8 1299 aa11.11□□□□□ -0.63
YBX3-212ENST00000542002 CPLX2Q6PUV4 134 aaKnown RBP11.11□□□□□ -0.63
YBX3-212ENST00000542002 C16orf59Q7L2K0 433 aa11.11□□□□□ -0.63
YBX3-212ENST00000542002 CCDC12Q8WUD4 166 aaPredicted RBP11.11□□□□□ -0.63
YBX3-212ENST00000542002 VWCEQ96DN2 955 aa11.11□□□□□ -0.63
YBX3-212ENST00000542002 PHF20Q9BVI0 1012 aa11.11□□□□□ -0.63
YBX3-212ENST00000542002 BACH2Q9BYV9 841 aa11.11□□□□□ -0.63
YBX3-212ENST00000542002 AGO4Q9HCK5 861 aaKnown RBP11.11□□□□□ -0.63
YBX3-212ENST00000542002 ORC3Q9UBD5 711 aaPredicted RBP11.11□□□□□ -0.63
YBX3-212ENST00000542002 MROH7Q68CQ1 1323 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 STK36Q9NRP7 1315 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 SZT2Q5T011 3432 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 MAFGO15525 162 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 DHX15O43143 795 aaKnown RBP11.1□□□□□ -0.63
YBX3-212ENST00000542002 CDKL5O76039 1030 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 F2P00734 622 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 LGALS2P05162 132 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 RAG1P15918 1043 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 MFSD10Q14728 455 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 KIAA0753Q2KHM9 967 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 EARS2Q5JPH6 523 aaKnown RBP11.1□□□□□ -0.63
YBX3-212ENST00000542002 GDF6Q6KF10 455 aaPredicted RBP11.1□□□□□ -0.63
YBX3-212ENST00000542002 TRIM50Q86XT4 487 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 CCDC83Q8IWF9 413 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 BLIDQ8IZY5 108 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 DAGLBQ8NCG7 672 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 CCDC148Q8NFR7 591 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 LENG9Q96B70 501 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 TBC1D32Q96NH3 1257 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 PCYT2Q99447 389 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 ALG1Q9BT22 464 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 NOC4LQ9BVI4 516 aaKnown RBP11.1□□□□□ -0.63
YBX3-212ENST00000542002 PPP1R12CQ9BZL4 782 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 UBE2OQ9C0C9 1292 aaKnown RBP11.1□□□□□ -0.63
YBX3-212ENST00000542002 EHMT1Q9H9B1 1298 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 HDAC6Q9UBN7 1215 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 PRKAG2Q9UGJ0 569 aa11.1□□□□□ -0.63
YBX3-212ENST00000542002 KIAA1217Q5T5P2 1943 aa11.09□□□□□ -0.63
YBX3-212ENST00000542002 H3BRB1 525 aa11.09□□□□□ -0.63
YBX3-212ENST00000542002 SOX1O00570 391 aaPredicted RBP11.09□□□□□ -0.63
YBX3-212ENST00000542002 CCNE2O96020 404 aa11.09□□□□□ -0.63
YBX3-212ENST00000542002 CIITAP33076 1130 aa11.09□□□□□ -0.63
YBX3-212ENST00000542002 ZNF76P36508 570 aa11.09□□□□□ -0.63
YBX3-212ENST00000542002 SHHQ15465 462 aa11.09□□□□□ -0.63
YBX3-212ENST00000542002 FAM47CQ5HY64 1035 aa11.09□□□□□ -0.63
YBX3-212ENST00000542002 C9orf50Q5SZB4 431 aa11.09□□□□□ -0.63
YBX3-212ENST00000542002 UTP14CQ5TAP6 766 aaKnown RBP11.09□□□□□ -0.63
YBX3-212ENST00000542002 MFSD5Q6N075 450 aa11.09□□□□□ -0.63
YBX3-212ENST00000542002 NIPA1Q7RTP0 329 aa11.09□□□□□ -0.63
YBX3-212ENST00000542002 SESTD1Q86VW0 696 aa11.09□□□□□ -0.63
YBX3-212ENST00000542002 PLA2G4DQ86XP0 818 aa11.09□□□□□ -0.63
YBX3-212ENST00000542002 BICD2Q8TD16 824 aa11.09□□□□□ -0.63
YBX3-212ENST00000542002 TBCKQ8TEA7 893 aa11.09□□□□□ -0.63
YBX3-212ENST00000542002 WNT8BQ93098 351 aa11.09□□□□□ -0.63
YBX3-212ENST00000542002 GJA10Q969M2 543 aa11.09□□□□□ -0.63
YBX3-212ENST00000542002 CDHR1Q96JP9 859 aa11.09□□□□□ -0.63
YBX3-212ENST00000542002 LBHD1Q9BQE6 289 aaPredicted RBP11.09□□□□□ -0.63
YBX3-212ENST00000542002 SEZ6LQ9BYH1 1024 aa11.09□□□□□ -0.63
YBX3-212ENST00000542002 RNPEPQ9H4A4 650 aa11.09□□□□□ -0.63
YBX3-212ENST00000542002 TUT1Q9H6E5 874 aaKnown RBP11.09□□□□□ -0.63
YBX3-212ENST00000542002 GTF2IRD1Q9UHL9 959 aa11.09□□□□□ -0.63
YBX3-212ENST00000542002 LAMA2P24043 3122 aaKnown RBP11.08□□□□□ -0.64
YBX3-212ENST00000542002 CEP290O15078 2479 aa11.08□□□□□ -0.64
YBX3-212ENST00000542002 FAM205CA6NFA0 338 aa11.08□□□□□ -0.64
YBX3-212ENST00000542002 NOP56O00567 594 aaKnown RBP11.08□□□□□ -0.64
YBX3-212ENST00000542002 TLR3O15455 904 aaKnown RBP11.08□□□□□ -0.64
YBX3-212ENST00000542002 CSF2RAP15509 400 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms