RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 ATP2C1P98194 919 aaPredicted RBP10.1□□□□□ -0.79
THBS3-211ENST00000541990 ACTN3Q08043 901 aaPredicted RBP10.1□□□□□ -0.79
THBS3-211ENST00000541990 NNTQ13423 1086 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 CCDC96Q2M329 555 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 NAA35Q5VZE5 725 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 POTEDQ86YR6 584 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 ADSSL1Q8N142 457 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 MMGT1Q8N4V1 131 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 RPGRIP1Q96KN7 1286 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 TRIM47Q96LD4 638 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 CCDC43Q96MW1 224 aaKnown RBP10.1□□□□□ -0.79
THBS3-211ENST00000541990 GMLQ99445 158 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 SYT17Q9BSW7 474 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 ECM2O94769 699 aaPredicted RBP10.1□□□□□ -0.79
THBS3-211ENST00000541990 CCDC172P0C7W6 258 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 PLCG2P16885 1265 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 SCP2P22307 547 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 LSP1P33241 339 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 EPS15P42566 896 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 CARSP49589 748 aaKnown RBP10.1□□□□□ -0.79
THBS3-211ENST00000541990 GUCY2FP51841 1108 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 KRT83P78385 493 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 SKOR1P84550 965 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 GABPAQ06546 454 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 OTUD6BQ8N6M0 293 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 ZKSCAN4Q969J2 545 aaPredicted RBP10.1□□□□□ -0.79
THBS3-211ENST00000541990 FERMT2Q96AC1 680 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 OSBPL9Q96SU4 736 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 SUFUQ9UMX1 484 aa10.1□□□□□ -0.79
THBS3-211ENST00000541990 LRRC37AA6NMS7 1700 aa10.09□□□□□ -0.79
THBS3-211ENST00000541990 MEFVO15553 781 aaPredicted RBP10.09□□□□□ -0.79
THBS3-211ENST00000541990 GLI1P08151 1106 aa10.09□□□□□ -0.79
THBS3-211ENST00000541990 NAALADL2Q58DX5 795 aa10.09□□□□□ -0.79
THBS3-211ENST00000541990 SUPT20HQ8NEM7 779 aa10.09□□□□□ -0.79
THBS3-211ENST00000541990 TRPM4Q8TD43 1214 aa10.09□□□□□ -0.79
THBS3-211ENST00000541990 CABS1Q96KC9 395 aa10.09□□□□□ -0.79
THBS3-211ENST00000541990 PCMTD1Q96MG8 357 aaPredicted RBP10.09□□□□□ -0.79
THBS3-211ENST00000541990 MAD2L2Q9UI95 211 aa10.09□□□□□ -0.79
THBS3-211ENST00000541990 NFU1Q9UMS0 254 aa10.09□□□□□ -0.79
THBS3-211ENST00000541990 ANO9A1A5B4 782 aa10.09□□□□□ -0.79
THBS3-211ENST00000541990 CYLC1P35663 651 aaPredicted RBP10.09□□□□□ -0.79
THBS3-211ENST00000541990 VAV2P52735 878 aa10.09□□□□□ -0.79
THBS3-211ENST00000541990 NAP1L1P55209 391 aaKnown RBP10.09□□□□□ -0.79
THBS3-211ENST00000541990 RNF187Q5TA31 235 aaPredicted RBP10.09□□□□□ -0.79
THBS3-211ENST00000541990 GBP6Q6ZN66 633 aa10.09□□□□□ -0.79
THBS3-211ENST00000541990 HEATR3Q7Z4Q2 680 aa10.09□□□□□ -0.79
THBS3-211ENST00000541990 ACER1Q8TDN7 264 aa10.09□□□□□ -0.79
THBS3-211ENST00000541990 PIK3R5Q8WYR1 880 aa10.09□□□□□ -0.79
THBS3-211ENST00000541990 HPS3Q969F9 1004 aa10.09□□□□□ -0.79
THBS3-211ENST00000541990 COA7Q96BR5 231 aa10.09□□□□□ -0.79
THBS3-211ENST00000541990 RNF26Q9BY78 433 aaPredicted RBP10.09□□□□□ -0.79
THBS3-211ENST00000541990 STIM2Q9P246 746 aa10.09□□□□□ -0.79
THBS3-211ENST00000541990 CNOT7Q9UIV1 285 aaKnown RBP10.09□□□□□ -0.79
THBS3-211ENST00000541990 A0A1W2PQC6 194 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 KLRF2D3W0D1 207 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 FSBPO95073 299 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 EEF2P13639 858 aaKnown RBP10.08□□□□□ -0.8
THBS3-211ENST00000541990 KIF5AQ12840 1032 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 TSR1Q2NL82 804 aaKnown RBP10.08□□□□□ -0.8
THBS3-211ENST00000541990 CERKLQ49MI3 558 aaPredicted RBP10.08□□□□□ -0.8
THBS3-211ENST00000541990 TMTC3Q6ZXV5 915 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 ZNF473Q8WTR7 871 aaKnown RBP10.08□□□□□ -0.8
THBS3-211ENST00000541990 RUFY1Q96T51 708 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 DUSP9Q99956 384 aaKnown RBP10.08□□□□□ -0.8
THBS3-211ENST00000541990 TUBGCP2Q9BSJ2 902 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 CENPHQ9H3R5 247 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 MYOZ2Q9NPC6 264 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 ARHGAP20Q9P2F6 1191 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 CCDC88AQ3V6T2 1871 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 A0A1W2PRG0 241 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 H7C1D1 291 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 BUB1O43683 1085 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 KLRC4O43908 158 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 HSF2BPO75031 334 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 HLA-DOAP06340 250 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 EPB41P11171 864 aaKnown RBP10.08□□□□□ -0.8
THBS3-211ENST00000541990 EPHB4P54760 987 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 RNASE9P60153 205 aaKnown RBP10.08□□□□□ -0.8
THBS3-211ENST00000541990 KIAA1755Q5JYT7 1200 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 CC2D2BQ6DHV5 1058 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 TTI2Q6NXR4 508 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 SIAH1Q8IUQ4 282 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 EHBP1Q8NDI1 1231 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 IFT81Q8WYA0 676 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 PIGSQ96S52 555 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 SH2D4AQ9H788 454 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 MTMR4Q9NYA4 1195 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 SERPINA10Q9UK55 444 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 CEP83Q9Y592 693 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 CNTNAP5Q8WYK1 1306 aa10.08□□□□□ -0.8
THBS3-211ENST00000541990 CCDC196A0A1B0GTZ2 297 aa10.07□□□□□ -0.8
THBS3-211ENST00000541990 KIAA0754O94854 1291 aa10.07□□□□□ -0.8
THBS3-211ENST00000541990 SSBP05455 408 aaKnown RBP eCLIP10.07□□□□□ -0.8
THBS3-211ENST00000541990 PDHBP11177 359 aa10.07□□□□□ -0.8
THBS3-211ENST00000541990 TBC1D8BQ0IIM8 1120 aa10.07□□□□□ -0.8
THBS3-211ENST00000541990 IFT88Q13099 833 aa10.07□□□□□ -0.8
THBS3-211ENST00000541990 RASA3Q14644 834 aa10.07□□□□□ -0.8
THBS3-211ENST00000541990 PROCA1Q8NCQ7 364 aaPredicted RBP10.07□□□□□ -0.8
THBS3-211ENST00000541990 NEDD1Q8NHV4 660 aa10.07□□□□□ -0.8
THBS3-211ENST00000541990 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms