RNA–Protein interactions for RNA: ENST00000541817.5

CHFR-220, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-220ENST00000541817 EDNRBP24530 442 aa11.53□□□□□ -0.56
CHFR-220ENST00000541817 RPS6P62753 249 aaKnown RBP11.53□□□□□ -0.56
CHFR-220ENST00000541817 MTMR3Q13615 1198 aa11.53□□□□□ -0.56
CHFR-220ENST00000541817 RCSD1Q6JBY9 416 aa11.53□□□□□ -0.56
CHFR-220ENST00000541817 RNF207Q6ZRF8 634 aa11.53□□□□□ -0.56
CHFR-220ENST00000541817 MICAL1Q8TDZ2 1067 aa11.53□□□□□ -0.56
CHFR-220ENST00000541817 RIN2Q8WYP3 895 aaPredicted RBP11.53□□□□□ -0.56
CHFR-220ENST00000541817 COL26A1Q96A83 441 aa11.53□□□□□ -0.56
CHFR-220ENST00000541817 BOLA2Q9H3K6 86 aa11.53□□□□□ -0.56
CHFR-220ENST00000541817 EP300Q09472 2414 aaPredicted RBP11.52□□□□□ -0.56
CHFR-220ENST00000541817 GSG1L2A8MUP6 293 aa11.52□□□□□ -0.57
CHFR-220ENST00000541817 C2CD4DB7Z1M9 353 aa11.52□□□□□ -0.57
CHFR-220ENST00000541817 TREHO43280 583 aa11.52□□□□□ -0.57
CHFR-220ENST00000541817 CLCN5P51795 746 aa11.52□□□□□ -0.57
CHFR-220ENST00000541817 LLGL2Q6P1M3 1020 aa11.52□□□□□ -0.57
CHFR-220ENST00000541817 SERINC5Q86VE9 423 aa11.52□□□□□ -0.57
CHFR-220ENST00000541817 UBALD2Q8IYN6 164 aa11.52□□□□□ -0.57
CHFR-220ENST00000541817 ATP6V0A1Q93050 837 aa11.52□□□□□ -0.57
CHFR-220ENST00000541817 GMCL1Q96IK5 515 aa11.52□□□□□ -0.57
CHFR-220ENST00000541817 S1PR5Q9H228 398 aa11.52□□□□□ -0.57
CHFR-220ENST00000541817 RC3H2Q9HBD1 1191 aaKnown RBP11.52□□□□□ -0.57
CHFR-220ENST00000541817 PAG1Q9NWQ8 432 aa11.52□□□□□ -0.57
CHFR-220ENST00000541817 RWDD3Q9Y3V2 267 aa11.52□□□□□ -0.57
CHFR-220ENST00000541817 MAP1BP46821 2468 aaKnown RBP11.51□□□□□ -0.57
CHFR-220ENST00000541817 F2P00734 622 aa11.51□□□□□ -0.57
CHFR-220ENST00000541817 TSPY3P0CV98 308 aa11.51□□□□□ -0.57
CHFR-220ENST00000541817 TSPY8P0CW00 308 aa11.51□□□□□ -0.57
CHFR-220ENST00000541817 TRIM27P14373 513 aa11.51□□□□□ -0.57
CHFR-220ENST00000541817 NPR3P17342 541 aa11.51□□□□□ -0.57
CHFR-220ENST00000541817 TECP42680 631 aa11.51□□□□□ -0.57
CHFR-220ENST00000541817 GATMP50440 423 aa11.51□□□□□ -0.57
CHFR-220ENST00000541817 RARSP54136 660 aaKnown RBP11.51□□□□□ -0.57
CHFR-220ENST00000541817 ATXN1P54253 815 aaKnown RBP11.51□□□□□ -0.57
CHFR-220ENST00000541817 TFAP4Q01664 338 aa11.51□□□□□ -0.57
CHFR-220ENST00000541817 CCDC96Q2M329 555 aa11.51□□□□□ -0.57
CHFR-220ENST00000541817 SBK1Q52WX2 424 aa11.51□□□□□ -0.57
CHFR-220ENST00000541817 SYCE2Q6PIF2 218 aa11.51□□□□□ -0.57
CHFR-220ENST00000541817 DTWD2Q8NBA8 298 aa11.51□□□□□ -0.57
CHFR-220ENST00000541817 EXOC6Q8TAG9 804 aa11.51□□□□□ -0.57
CHFR-220ENST00000541817 ATP8B4Q8TF62 1192 aa11.51□□□□□ -0.57
CHFR-220ENST00000541817 TBC1D5Q92609 795 aa11.51□□□□□ -0.57
CHFR-220ENST00000541817 FRAT1Q92837 279 aaPredicted RBP11.51□□□□□ -0.57
CHFR-220ENST00000541817 ZNF689Q96CS4 500 aaPredicted RBP11.51□□□□□ -0.57
CHFR-220ENST00000541817 NEK1Q96PY6 1258 aa11.51□□□□□ -0.57
CHFR-220ENST00000541817 KATNAL1Q9BW62 490 aa11.51□□□□□ -0.57
CHFR-220ENST00000541817 RANBP17Q9H2T7 1088 aaKnown RBP11.51□□□□□ -0.57
CHFR-220ENST00000541817 KIAA1217Q5T5P2 1943 aa11.5□□□□□ -0.57
CHFR-220ENST00000541817 LOC102724159A0A0B4J2E5 919 aa11.5□□□□□ -0.57
CHFR-220ENST00000541817 DCDC2BA2VCK2 349 aa11.5□□□□□ -0.57
CHFR-220ENST00000541817 ENPP3O14638 875 aa11.5□□□□□ -0.57
CHFR-220ENST00000541817 NMT2O60551 498 aa11.5□□□□□ -0.57
CHFR-220ENST00000541817 IBSPP21815 317 aaPredicted RBP11.5□□□□□ -0.57
CHFR-220ENST00000541817 PWP2Q15269 919 aaKnown RBP11.5□□□□□ -0.57
CHFR-220ENST00000541817 CCDC105Q8IYK2 499 aa11.5□□□□□ -0.57
CHFR-220ENST00000541817 TMEM57Q8N5G2 664 aa11.5□□□□□ -0.57
CHFR-220ENST00000541817 NEDD1Q8NHV4 660 aa11.5□□□□□ -0.57
CHFR-220ENST00000541817 P2RX5Q93086 422 aa11.5□□□□□ -0.57
CHFR-220ENST00000541817 TAAR1Q96RJ0 339 aa11.5□□□□□ -0.57
CHFR-220ENST00000541817 STRBPQ96SI9 672 aaKnown RBP11.5□□□□□ -0.57
CHFR-220ENST00000541817 HAUS7Q99871 368 aa11.5□□□□□ -0.57
CHFR-220ENST00000541817 PLVAPQ9BX97 442 aa11.5□□□□□ -0.57
CHFR-220ENST00000541817 EPB41L4AQ9HCS5 686 aaPredicted RBP11.5□□□□□ -0.57
CHFR-220ENST00000541817 GPCPD1Q9NPB8 672 aa11.5□□□□□ -0.57
CHFR-220ENST00000541817 LIMD1Q9UGP4 676 aa11.5□□□□□ -0.57
CHFR-220ENST00000541817 FRMPD2Q68DX3 1309 aaPredicted RBP11.5□□□□□ -0.57
CHFR-220ENST00000541817 MYH7P12883 1935 aa11.5□□□□□ -0.57
CHFR-220ENST00000541817 ACACBO00763 2458 aa11.49□□□□□ -0.57
CHFR-220ENST00000541817 C17orf102A2RUQ5 167 aa11.49□□□□□ -0.57
CHFR-220ENST00000541817 PLA2G6O60733 806 aa11.49□□□□□ -0.57
CHFR-220ENST00000541817 WEE2P0C1S8 567 aa11.49□□□□□ -0.57
CHFR-220ENST00000541817 GHRP10912 638 aa11.49□□□□□ -0.57
CHFR-220ENST00000541817 COL9A3Q14050 684 aaPredicted RBP11.49□□□□□ -0.57
CHFR-220ENST00000541817 DUSP6Q16828 381 aa11.49□□□□□ -0.57
CHFR-220ENST00000541817 ANKRD54Q6NXT1 300 aa11.49□□□□□ -0.57
CHFR-220ENST00000541817 DNERQ8NFT8 737 aa11.49□□□□□ -0.57
CHFR-220ENST00000541817 ARHGAP45Q92619 1136 aa11.49□□□□□ -0.57
CHFR-220ENST00000541817 MPHOSPH6Q99547 160 aaKnown RBP11.49□□□□□ -0.57
CHFR-220ENST00000541817 POMKQ9H5K3 350 aa11.49□□□□□ -0.57
CHFR-220ENST00000541817 DDX41Q9UJV9 622 aaKnown RBP11.49□□□□□ -0.57
CHFR-220ENST00000541817 STX8Q9UNK0 236 aa11.49□□□□□ -0.57
CHFR-220ENST00000541817 CHD6Q8TD26 2715 aa11.49□□□□□ -0.57
CHFR-220ENST00000541817 DGKIO75912 1065 aa11.48□□□□□ -0.57
CHFR-220ENST00000541817 SMIM10L2AP0DMW4 78 aa11.48□□□□□ -0.57
CHFR-220ENST00000541817 SMIM10L2BP0DMW5 78 aa11.48□□□□□ -0.57
CHFR-220ENST00000541817 AOC1P19801 751 aa11.48□□□□□ -0.57
CHFR-220ENST00000541817 ERVFC1P60507 584 aa11.48□□□□□ -0.57
CHFR-220ENST00000541817 UBE3CQ15386 1083 aa11.48□□□□□ -0.57
CHFR-220ENST00000541817 SYDE2Q5VT97 1194 aa11.48□□□□□ -0.57
CHFR-220ENST00000541817 RUBCNQ92622 972 aa11.48□□□□□ -0.57
CHFR-220ENST00000541817 APBB2Q92870 758 aa11.48□□□□□ -0.57
CHFR-220ENST00000541817 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHFR-220ENST00000541817 RNPEPQ9H4A4 650 aa11.48□□□□□ -0.57
CHFR-220ENST00000541817 SYNPO2Q9UMS6 1093 aa11.48□□□□□ -0.57
CHFR-220ENST00000541817 NR2E1Q9Y466 385 aa11.48□□□□□ -0.57
CHFR-220ENST00000541817 STK25O00506 426 aa11.47□□□□□ -0.57
CHFR-220ENST00000541817 CHRNA1P02708 482 aa11.47□□□□□ -0.57
CHFR-220ENST00000541817 TDO2P48775 406 aa11.47□□□□□ -0.57
CHFR-220ENST00000541817 APOBRQ0VD83 1088 aa11.47□□□□□ -0.57
CHFR-220ENST00000541817 HSDL1Q3SXM5 330 aa11.47□□□□□ -0.57
CHFR-220ENST00000541817 USH1GQ495M9 461 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms