RNA–Protein interactions for RNA: ENST00000541562.5

VARS2-211, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,566 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-211ENST00000541562 SH3GLB2Q9NR46 395 aa16.6■□□□□ 0.25
VARS2-211ENST00000541562 TACC1O75410 805 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 PALMO75781 387 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 HLTFQ14527 1009 aaKnown RBP eCLIP16.59■□□□□ 0.25
VARS2-211ENST00000541562 COG2Q14746 738 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 AOC3Q16853 763 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 TRAPPC11Q7Z392 1133 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 SFR1Q86XK3 245 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 CPXCR1Q8N123 301 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 RBM12Q9NTZ6 932 aaKnown RBP16.59■□□□□ 0.25
VARS2-211ENST00000541562 SAMM50Q9Y512 469 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 ANKRD36CQ5JPF3 1778 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 TMEM150BA6NC51 233 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 TUBB4AP04350 444 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 HLA-DOAP06340 250 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 CYP2J2P51589 502 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 KCNMA1Q12791 1236 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 BRD3Q15059 726 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 ARHGAP44Q17R89 818 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 GJD4Q96KN9 370 aaPredicted RBP16.59■□□□□ 0.25
VARS2-211ENST00000541562 SNED1Q8TER0 1413 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 ABCA3Q99758 1704 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 TMEM110-MUSTN1A8MSY1 372 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 KLRC1P26715 233 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 PPP4CP60510 307 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 VPS72Q15906 364 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 WHAMMP3Q1A5X7 153 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 LEKR1Q6ZMV7 388 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 KRT12Q99456 494 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 SELENOOQ9BVL4 669 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 DNAJC18Q9H819 358 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 FAM53CQ9NYF3 392 aa16.59■□□□□ 0.25
VARS2-211ENST00000541562 A0A087X0T9 212 aa16.58■□□□□ 0.25
VARS2-211ENST00000541562 FAM228BP0C875 321 aa16.58■□□□□ 0.25
VARS2-211ENST00000541562 CRKP46108 304 aa16.58■□□□□ 0.25
VARS2-211ENST00000541562 MRPL12P52815 198 aaKnown RBP16.58■□□□□ 0.25
VARS2-211ENST00000541562 GUCY2DQ02846 1103 aa16.58■□□□□ 0.25
VARS2-211ENST00000541562 KLHL30Q0D2K2 578 aa16.58■□□□□ 0.25
VARS2-211ENST00000541562 KCNB1Q14721 858 aa16.58■□□□□ 0.25
VARS2-211ENST00000541562 FAM83BQ5T0W9 1011 aa16.58■□□□□ 0.25
VARS2-211ENST00000541562 UHMK1Q8TAS1 419 aaKnown RBP16.58■□□□□ 0.25
VARS2-211ENST00000541562 C7orf25Q9BPX7 421 aa16.58■□□□□ 0.25
VARS2-211ENST00000541562 PCIF1Q9H4Z3 704 aa16.58■□□□□ 0.25
VARS2-211ENST00000541562 QTRT2Q9H974 415 aaKnown RBP16.58■□□□□ 0.25
VARS2-211ENST00000541562 EMILIN3Q9NT22 766 aa16.58■□□□□ 0.25
VARS2-211ENST00000541562 NFU1Q9UMS0 254 aa16.58■□□□□ 0.25
VARS2-211ENST00000541562 ITIH6Q6UXX5 1313 aa16.58■□□□□ 0.25
VARS2-211ENST00000541562 TISP43B9A030 160 aa16.58■□□□□ 0.24
VARS2-211ENST00000541562 NMT1P30419 496 aaKnown RBP16.58■□□□□ 0.24
VARS2-211ENST00000541562 ICA1Q05084 483 aa16.58■□□□□ 0.24
VARS2-211ENST00000541562 UNC13DQ70J99 1090 aa16.58■□□□□ 0.24
VARS2-211ENST00000541562 TEKT1Q969V4 418 aa16.58■□□□□ 0.24
VARS2-211ENST00000541562 RAB34Q9BZG1 259 aa16.58■□□□□ 0.24
VARS2-211ENST00000541562 FBXO28Q9NVF7 368 aa16.58■□□□□ 0.24
VARS2-211ENST00000541562 KRT14P02533 472 aa16.58■□□□□ 0.24
VARS2-211ENST00000541562 USP14P54578 494 aa16.58■□□□□ 0.24
VARS2-211ENST00000541562 TRIM14Q14142 442 aa16.58■□□□□ 0.24
VARS2-211ENST00000541562 FAM114A1Q8IWE2 563 aa16.58■□□□□ 0.24
VARS2-211ENST00000541562 MTMR9Q96QG7 549 aa16.58■□□□□ 0.24
VARS2-211ENST00000541562 ANO3Q9BYT9 981 aa16.58■□□□□ 0.24
VARS2-211ENST00000541562 FZD1Q9UP38 647 aa16.58■□□□□ 0.24
VARS2-211ENST00000541562 PNMA6FA0A0J9YX94 578 aa16.57■□□□□ 0.24
VARS2-211ENST00000541562 SMIM23A6NLE4 172 aa16.57■□□□□ 0.24
VARS2-211ENST00000541562 EIF3JO75822 258 aaKnown RBP16.57■□□□□ 0.24
VARS2-211ENST00000541562 VAV2P52735 878 aa16.57■□□□□ 0.24
VARS2-211ENST00000541562 PYM1Q9BRP8 204 aaKnown RBP16.57■□□□□ 0.24
VARS2-211ENST00000541562 SMCHD1A6NHR9 2005 aa16.57■□□□□ 0.24
VARS2-211ENST00000541562 TRIM49P0CI25 452 aa16.57■□□□□ 0.24
VARS2-211ENST00000541562 TRIM49CP0CI26 452 aa16.57■□□□□ 0.24
VARS2-211ENST00000541562 IRX5P78411 483 aaPredicted RBP16.57■□□□□ 0.24
VARS2-211ENST00000541562 OR2W6PQ8NHA6 318 aa16.57■□□□□ 0.24
VARS2-211ENST00000541562 ACER1Q8TDN7 264 aa16.57■□□□□ 0.24
VARS2-211ENST00000541562 F5H6K3 240 aa16.57■□□□□ 0.24
VARS2-211ENST00000541562 FAM153BP0C7A2 387 aa16.57■□□□□ 0.24
VARS2-211ENST00000541562 HPDP32754 393 aaPredicted RBP16.57■□□□□ 0.24
VARS2-211ENST00000541562 KLRC3Q07444 240 aa16.57■□□□□ 0.24
VARS2-211ENST00000541562 MAN2A1Q16706 1144 aa16.57■□□□□ 0.24
VARS2-211ENST00000541562 FAM153CQ494X1 144 aa16.57■□□□□ 0.24
VARS2-211ENST00000541562 OSBPL9Q96SU4 736 aa16.57■□□□□ 0.24
VARS2-211ENST00000541562 EPB41L5Q9HCM4 733 aa16.57■□□□□ 0.24
VARS2-211ENST00000541562 FAM153AQ9UHL3 310 aa16.57■□□□□ 0.24
VARS2-211ENST00000541562 SPDYE3A6NKU9 549 aa16.56■□□□□ 0.24
VARS2-211ENST00000541562 FAM86B1E9PN63 330 aa16.56■□□□□ 0.24
VARS2-211ENST00000541562 KCNK3O14649 394 aa16.56■□□□□ 0.24
VARS2-211ENST00000541562 ZBTB5O15062 677 aa16.56■□□□□ 0.24
VARS2-211ENST00000541562 FAM86B2P0C5J1 330 aa16.56■□□□□ 0.24
VARS2-211ENST00000541562 PLCG2P16885 1265 aa16.56■□□□□ 0.24
VARS2-211ENST00000541562 PDGFDQ9GZP0 370 aaPredicted RBP16.56■□□□□ 0.24
VARS2-211ENST00000541562 USP20Q9Y2K6 914 aa16.56■□□□□ 0.24
VARS2-211ENST00000541562 TLR2O60603 784 aa16.56■□□□□ 0.24
VARS2-211ENST00000541562 CALCAP01258 141 aa16.56■□□□□ 0.24
VARS2-211ENST00000541562 CARSP49589 748 aaKnown RBP16.56■□□□□ 0.24
VARS2-211ENST00000541562 KCNH2Q12809 1159 aa16.56■□□□□ 0.24
VARS2-211ENST00000541562 SFMBT2Q5VUG0 894 aa16.56■□□□□ 0.24
VARS2-211ENST00000541562 CENPPQ6IPU0 288 aa16.56■□□□□ 0.24
VARS2-211ENST00000541562 APOBEC3HQ6NTF7 200 aaKnown RBP16.56■□□□□ 0.24
VARS2-211ENST00000541562 CATSPER3Q86XQ3 398 aa16.56■□□□□ 0.24
VARS2-211ENST00000541562 RIOX1Q9H6W3 641 aa16.56■□□□□ 0.24
VARS2-211ENST00000541562 COL4A3BPQ9Y5P4 624 aa16.56■□□□□ 0.24
VARS2-211ENST00000541562 SPATA4Q8NEY3 305 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms