RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 CDHR1Q96JP9 859 aa19.29■□□□□ 0.68
CD9-209ENST00000540891 GPR20Q99678 358 aa19.29■□□□□ 0.68
CD9-209ENST00000540891 UBE2OQ9C0C9 1292 aaKnown RBP19.29■□□□□ 0.68
CD9-209ENST00000540891 GTF3C3Q9Y5Q9 886 aa19.29■□□□□ 0.68
CD9-209ENST00000540891 A0A1W2PPC1 479 aa19.28■□□□□ 0.68
CD9-209ENST00000540891 FAM86B1E9PN63 330 aa19.28■□□□□ 0.68
CD9-209ENST00000540891 M0R2N6 131 aa19.28■□□□□ 0.68
CD9-209ENST00000540891 MEIS1O00470 390 aa19.28■□□□□ 0.68
CD9-209ENST00000540891 MAFGO15525 162 aa19.28■□□□□ 0.68
CD9-209ENST00000540891 TIMP1P01033 207 aa19.28■□□□□ 0.68
CD9-209ENST00000540891 CYP3A4P08684 503 aa19.28■□□□□ 0.68
CD9-209ENST00000540891 FAM86B2P0C5J1 330 aa19.28■□□□□ 0.68
CD9-209ENST00000540891 ARP10275 920 aa19.28■□□□□ 0.68
CD9-209ENST00000540891 FDPSP14324 419 aaKnown RBP19.28■□□□□ 0.68
CD9-209ENST00000540891 RAG1P15918 1043 aa19.28■□□□□ 0.68
CD9-209ENST00000540891 PSEN2P49810 448 aa19.28■□□□□ 0.68
CD9-209ENST00000540891 PTPN11Q06124 597 aaPredicted RBP19.28■□□□□ 0.68
CD9-209ENST00000540891 MCTP2Q6DN12 878 aa19.28■□□□□ 0.68
CD9-209ENST00000540891 SESTD1Q86VW0 696 aa19.28■□□□□ 0.68
CD9-209ENST00000540891 BICD2Q8TD16 824 aa19.28■□□□□ 0.68
CD9-209ENST00000540891 KCNH7Q9NS40 1196 aa19.28■□□□□ 0.68
CD9-209ENST00000540891 GJB4Q9NTQ9 266 aa19.28■□□□□ 0.68
CD9-209ENST00000540891 PKD2L1Q9P0L9 805 aa19.28■□□□□ 0.68
CD9-209ENST00000540891 PCDHA4Q9UN74 947 aa19.28■□□□□ 0.68
CD9-209ENST00000540891 UMODL1Q5DID0 1318 aa19.27■□□□□ 0.68
CD9-209ENST00000540891 IGLV3-22A0A075B6J6 115 aa19.27■□□□□ 0.68
CD9-209ENST00000540891 EPHB4P54760 987 aa19.27■□□□□ 0.68
CD9-209ENST00000540891 MFSD10Q14728 455 aa19.27■□□□□ 0.68
CD9-209ENST00000540891 FAM47CQ5HY64 1035 aa19.27■□□□□ 0.68
CD9-209ENST00000540891 FAM177A1Q8N128 213 aaPredicted RBP19.27■□□□□ 0.68
CD9-209ENST00000540891 DAGLBQ8NCG7 672 aa19.27■□□□□ 0.68
CD9-209ENST00000540891 NSUN7Q8NE18 718 aaKnown RBP19.27■□□□□ 0.68
CD9-209ENST00000540891 CTAGE1Q96RT6 745 aa19.27■□□□□ 0.68
CD9-209ENST00000540891 PPP1R12CQ9BZL4 782 aa19.27■□□□□ 0.68
CD9-209ENST00000540891 NOP56O00567 594 aaKnown RBP19.26■□□□□ 0.67
CD9-209ENST00000540891 LGALS2P05162 132 aa19.26■□□□□ 0.67
CD9-209ENST00000540891 CHMP4BP1P59074 171 aa19.26■□□□□ 0.67
CD9-209ENST00000540891 SP4Q02446 784 aa19.26■□□□□ 0.67
CD9-209ENST00000540891 KIAA0753Q2KHM9 967 aa19.26■□□□□ 0.67
CD9-209ENST00000540891 TDHQ8IZJ6 230 aa19.26■□□□□ 0.67
CD9-209ENST00000540891 GIMAP8Q8ND71 665 aaPredicted RBP19.26■□□□□ 0.67
CD9-209ENST00000540891 ALG1Q9BT22 464 aa19.26■□□□□ 0.67
CD9-209ENST00000540891 PHF20Q9BVI0 1012 aa19.26■□□□□ 0.67
CD9-209ENST00000540891 NOC4LQ9BVI4 516 aaKnown RBP19.26■□□□□ 0.67
CD9-209ENST00000540891 KATNAL1Q9BW62 490 aa19.26■□□□□ 0.67
CD9-209ENST00000540891 AGO4Q9HCK5 861 aaKnown RBP19.26■□□□□ 0.67
CD9-209ENST00000540891 ORC3Q9UBD5 711 aaPredicted RBP19.26■□□□□ 0.67
CD9-209ENST00000540891 HDAC6Q9UBN7 1215 aa19.26■□□□□ 0.67
CD9-209ENST00000540891 KCNJ14Q9UNX9 436 aa19.26■□□□□ 0.67
CD9-209ENST00000540891 LIMCH1Q9UPQ0 1083 aa19.26■□□□□ 0.67
CD9-209ENST00000540891 TRIOBPQ9H2D6 2365 aa19.25■□□□□ 0.67
CD9-209ENST00000540891 GSTTP1A0A1W2PQM5 241 aa19.25■□□□□ 0.67
CD9-209ENST00000540891 JAK2O60674 1132 aa19.25■□□□□ 0.67
CD9-209ENST00000540891 CYP2C9P11712 490 aa19.25■□□□□ 0.67
CD9-209ENST00000540891 CIITAP33076 1130 aa19.25■□□□□ 0.67
CD9-209ENST00000540891 ITGB3BPQ13352 177 aaPredicted RBP19.25■□□□□ 0.67
CD9-209ENST00000540891 HIC1Q14526 733 aa19.25■□□□□ 0.67
CD9-209ENST00000540891 GDF6Q6KF10 455 aaPredicted RBP19.25■□□□□ 0.67
CD9-209ENST00000540891 MFSD5Q6N075 450 aa19.25■□□□□ 0.67
CD9-209ENST00000540891 NIPA1Q7RTP0 329 aa19.25■□□□□ 0.67
CD9-209ENST00000540891 TRIM50Q86XT4 487 aa19.25■□□□□ 0.67
CD9-209ENST00000540891 BLIDQ8IZY5 108 aa19.25■□□□□ 0.67
CD9-209ENST00000540891 HIPK3Q9H422 1215 aa19.25■□□□□ 0.67
CD9-209ENST00000540891 GTF2IRD1Q9UHL9 959 aa19.25■□□□□ 0.67
CD9-209ENST00000540891 H3BRB1 525 aa19.24■□□□□ 0.67
CD9-209ENST00000540891 SUPT20HL2P0C7V6 817 aa19.24■□□□□ 0.67
CD9-209ENST00000540891 CYP2C18P33260 490 aa19.24■□□□□ 0.67
CD9-209ENST00000540891 ZNF76P36508 570 aa19.24■□□□□ 0.67
CD9-209ENST00000540891 FXR1P51114 621 aaKnown RBP eCLIP19.24■□□□□ 0.67
CD9-209ENST00000540891 GALNT17Q6IS24 598 aa19.24■□□□□ 0.67
CD9-209ENST00000540891 PLA2G4DQ86XP0 818 aa19.24■□□□□ 0.67
CD9-209ENST00000540891 LENG9Q96B70 501 aa19.24■□□□□ 0.67
CD9-209ENST00000540891 WNT8AQ9H1J5 351 aa19.24■□□□□ 0.67
CD9-209ENST00000540891 TUT1Q9H6E5 874 aaKnown RBP19.24■□□□□ 0.67
CD9-209ENST00000540891 NFASCO94856 1347 aa19.24■□□□□ 0.67
CD9-209ENST00000540891 TCF7P36402 384 aaPredicted RBP19.23■□□□□ 0.67
CD9-209ENST00000540891 FPGSQ05932 587 aa19.23■□□□□ 0.67
CD9-209ENST00000540891 RABEP1Q15276 862 aa19.23■□□□□ 0.67
CD9-209ENST00000540891 PTGISQ16647 500 aa19.23■□□□□ 0.67
CD9-209ENST00000540891 C9orf50Q5SZB4 431 aa19.23■□□□□ 0.67
CD9-209ENST00000540891 C7orf31Q8N865 590 aa19.23■□□□□ 0.67
CD9-209ENST00000540891 TBC1D32Q96NH3 1257 aa19.23■□□□□ 0.67
CD9-209ENST00000540891 JPH1Q9HDC5 661 aaPredicted RBP19.23■□□□□ 0.67
CD9-209ENST00000540891 LAMA3Q16787 3333 aa19.22■□□□□ 0.67
CD9-209ENST00000540891 DHX15O43143 795 aaKnown RBP19.22■□□□□ 0.67
CD9-209ENST00000540891 CSF2RAP15509 400 aa19.22■□□□□ 0.67
CD9-209ENST00000540891 SHHQ15465 462 aa19.22■□□□□ 0.67
CD9-209ENST00000540891 UTP14CQ5TAP6 766 aaKnown RBP19.22■□□□□ 0.67
CD9-209ENST00000540891 CCDC83Q8IWF9 413 aa19.22■□□□□ 0.67
CD9-209ENST00000540891 TBCKQ8TEA7 893 aa19.22■□□□□ 0.67
CD9-209ENST00000540891 SEPT1Q8WYJ6 367 aa19.22■□□□□ 0.67
CD9-209ENST00000540891 UPF2Q9HAU5 1272 aaKnown RBP19.22■□□□□ 0.67
CD9-209ENST00000540891 SOX1O00570 391 aaPredicted RBP19.21■□□□□ 0.67
CD9-209ENST00000540891 HOXC8P31273 242 aa19.21■□□□□ 0.67
CD9-209ENST00000540891 USP11P51784 963 aa19.21■□□□□ 0.67
CD9-209ENST00000540891 CCL23P55773 120 aa19.21■□□□□ 0.67
CD9-209ENST00000540891 ZNF200P98182 395 aaPredicted RBP19.21■□□□□ 0.67
CD9-209ENST00000540891 C16orf59Q7L2K0 433 aa19.21■□□□□ 0.67
CD9-209ENST00000540891 OXER1Q8TDS5 423 aa19.21■□□□□ 0.67
CD9-209ENST00000540891 WASF1Q92558 559 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms