RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 CCT5P48643 541 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 GNGT1P63211 74 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 SKIDA1Q1XH10 827 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 TTMPQ5BVD1 217 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 PPP4R3AQ6IN85 833 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 FAM196AQ6ZSG2 479 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 C15orf52Q6ZUT6 534 aaKnown RBP13.56□□□□□ -0.24
NPC1-202ENST00000540608 ARL8AQ96BM9 186 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 COA7Q96BR5 231 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 CEP63Q96MT8 703 aa13.56□□□□□ -0.24
NPC1-202ENST00000540608 GNA14O95837 355 aa13.55□□□□□ -0.24
NPC1-202ENST00000540608 GLI1P08151 1106 aa13.55□□□□□ -0.24
NPC1-202ENST00000540608 PLCG2P16885 1265 aa13.55□□□□□ -0.24
NPC1-202ENST00000540608 COASYQ13057 564 aa13.55□□□□□ -0.24
NPC1-202ENST00000540608 ECM1Q16610 540 aa13.55□□□□□ -0.24
NPC1-202ENST00000540608 CCDC40Q4G0X9 1142 aa13.55□□□□□ -0.24
NPC1-202ENST00000540608 PRR5LQ6MZQ0 368 aa13.55□□□□□ -0.24
NPC1-202ENST00000540608 BCAS4Q8TDM0 211 aa13.55□□□□□ -0.24
NPC1-202ENST00000540608 ATP6V0A2Q9Y487 856 aa13.55□□□□□ -0.24
NPC1-202ENST00000540608 THSD7AQ9UPZ6 1657 aa13.55□□□□□ -0.24
NPC1-202ENST00000540608 GRID2IPA4D2P6 1211 aa13.55□□□□□ -0.24
NPC1-202ENST00000540608 PALMO75781 387 aa13.55□□□□□ -0.24
NPC1-202ENST00000540608 IQCKQ8N0W5 287 aa13.55□□□□□ -0.24
NPC1-202ENST00000540608 ZIM3Q96PE6 472 aa13.55□□□□□ -0.24
NPC1-202ENST00000540608 PANK4Q9NVE7 773 aa13.55□□□□□ -0.24
NPC1-202ENST00000540608 FRMPD2Q68DX3 1309 aaPredicted RBP13.55□□□□□ -0.24
NPC1-202ENST00000540608 RHBDL3P58872 404 aa13.54□□□□□ -0.24
NPC1-202ENST00000540608 APBA1Q02410 837 aa13.54□□□□□ -0.24
NPC1-202ENST00000540608 ASPRV1Q53RT3 343 aa13.54□□□□□ -0.24
NPC1-202ENST00000540608 RPGRQ92834 1020 aaKnown RBP13.54□□□□□ -0.24
NPC1-202ENST00000540608 LSM14BQ9BX40 385 aaKnown RBP13.54□□□□□ -0.24
NPC1-202ENST00000540608 EHD4Q9H223 541 aa13.54□□□□□ -0.24
NPC1-202ENST00000540608 BMP2KQ9NSY1 1161 aaPredicted RBP13.54□□□□□ -0.24
NPC1-202ENST00000540608 USP21Q9UK80 565 aa13.54□□□□□ -0.24
NPC1-202ENST00000540608 SHTN1A0MZ66 631 aa13.54□□□□□ -0.24
NPC1-202ENST00000540608 CARSP49589 748 aaKnown RBP13.54□□□□□ -0.24
NPC1-202ENST00000540608 MARSP56192 900 aaKnown RBP13.54□□□□□ -0.24
NPC1-202ENST00000540608 POLR2FP61218 127 aaKnown RBP13.54□□□□□ -0.24
NPC1-202ENST00000540608 PAK2Q13177 524 aa13.54□□□□□ -0.24
NPC1-202ENST00000540608 SLC18A3Q16572 532 aa13.54□□□□□ -0.24
NPC1-202ENST00000540608 FAM26FQ5R3K3 315 aa13.54□□□□□ -0.24
NPC1-202ENST00000540608 MEI1Q5TIA1 1274 aa13.54□□□□□ -0.24
NPC1-202ENST00000540608 TMC4Q7Z404 712 aa13.54□□□□□ -0.24
NPC1-202ENST00000540608 TADA2BQ86TJ2 420 aa13.54□□□□□ -0.24
NPC1-202ENST00000540608 EPB41L5Q9HCM4 733 aa13.54□□□□□ -0.24
NPC1-202ENST00000540608 PCDHGC5Q9Y5F6 944 aa13.54□□□□□ -0.24
NPC1-202ENST00000540608 IL1R1P14778 569 aa13.54□□□□□ -0.24
NPC1-202ENST00000540608 MEX3CQ5U5Q3 659 aaKnown RBP13.54□□□□□ -0.24
NPC1-202ENST00000540608 MREGQ8N565 214 aa13.54□□□□□ -0.24
NPC1-202ENST00000540608 TBC1D5Q92609 795 aa13.54□□□□□ -0.24
NPC1-202ENST00000540608 HAS1Q92839 578 aa13.54□□□□□ -0.24
NPC1-202ENST00000540608 FAM163AQ96GL9 167 aaPredicted RBP13.54□□□□□ -0.24
NPC1-202ENST00000540608 AIPL1Q9NZN9 384 aa13.54□□□□□ -0.24
NPC1-202ENST00000540608 NFU1Q9UMS0 254 aa13.54□□□□□ -0.24
NPC1-202ENST00000540608 LY75O60449 1722 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 HEXIM1O94992 359 aaKnown RBP13.53□□□□□ -0.24
NPC1-202ENST00000540608 SNHG28P0DPA3 235 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 KLRC1P26715 233 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 GUCY2DQ02846 1103 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 MFSD14BQ5SR56 506 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 HYIQ5T013 277 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 CFAP58Q5T655 872 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 PPP1R18Q6NYC8 613 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 TRIM59Q8IWR1 403 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 MTMR4Q9NYA4 1195 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 DDX25Q9UHL0 483 aaKnown RBP13.53□□□□□ -0.24
NPC1-202ENST00000540608 PCDHA2Q9Y5H9 948 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.53□□□□□ -0.24
NPC1-202ENST00000540608 FAM169AQ9Y6X4 670 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 EP400Q96L91 3159 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 FAM153BP0C7A2 387 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 TNNI2P48788 182 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 CLK2P49760 499 aaKnown RBP13.53□□□□□ -0.24
NPC1-202ENST00000540608 CDC37Q16543 378 aaPredicted RBP13.53□□□□□ -0.24
NPC1-202ENST00000540608 FAM153CQ494X1 144 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 EMC10Q5UCC4 262 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 CD302Q8IX05 232 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 IFT81Q8WYA0 676 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 CCDC43Q96MW1 224 aaKnown RBP13.53□□□□□ -0.24
NPC1-202ENST00000540608 LRRC4BQ9NT99 713 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 FAM153AQ9UHL3 310 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 GGA1Q9UJY5 639 aa13.53□□□□□ -0.24
NPC1-202ENST00000540608 PNMA6FA0A0J9YX94 578 aa13.52□□□□□ -0.24
NPC1-202ENST00000540608 FTCDO95954 541 aa13.52□□□□□ -0.24
NPC1-202ENST00000540608 CRY2Q49AN0 593 aa13.52□□□□□ -0.24
NPC1-202ENST00000540608 CCDC65Q8IXS2 484 aa13.52□□□□□ -0.24
NPC1-202ENST00000540608 INPP4AQ96PE3 977 aaPredicted RBP13.52□□□□□ -0.24
NPC1-202ENST00000540608 NT5C3AQ9H0P0 336 aa13.52□□□□□ -0.24
NPC1-202ENST00000540608 PCDHA12Q9UN75 941 aa13.52□□□□□ -0.24
NPC1-202ENST00000540608 PLIN4Q96Q06 1357 aa13.52□□□□□ -0.25
NPC1-202ENST00000540608 A0A087X0T9 212 aa13.52□□□□□ -0.25
NPC1-202ENST00000540608 FAM228BP0C875 321 aa13.52□□□□□ -0.25
NPC1-202ENST00000540608 ATP2B4P23634 1241 aa13.52□□□□□ -0.25
NPC1-202ENST00000540608 KIAA0753Q2KHM9 967 aa13.52□□□□□ -0.25
NPC1-202ENST00000540608 TTC19Q6DKK2 380 aaPredicted RBP13.52□□□□□ -0.25
NPC1-202ENST00000540608 SLF2Q8IX21 1173 aa13.52□□□□□ -0.25
NPC1-202ENST00000540608 ZC3H3Q8IXZ2 948 aaKnown RBP13.52□□□□□ -0.25
NPC1-202ENST00000540608 PIK3R5Q8WYR1 880 aa13.52□□□□□ -0.25
NPC1-202ENST00000540608 KRT12Q99456 494 aa13.52□□□□□ -0.25
NPC1-202ENST00000540608 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms