RNA–Protein interactions for RNA: ENST00000540537.5

CHFR-217, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-217ENST00000540537 MAFAQ8NHW3 353 aaPredicted RBP24.07■■□□□ 1.44
CHFR-217ENST00000540537 CDHR1Q96JP9 859 aa24.07■■□□□ 1.44
CHFR-217ENST00000540537 GPR20Q99678 358 aa24.07■■□□□ 1.44
CHFR-217ENST00000540537 USP26Q9BXU7 913 aa24.07■■□□□ 1.44
CHFR-217ENST00000540537 FTOQ9C0B1 505 aaKnown RBP eCLIP24.07■■□□□ 1.44
CHFR-217ENST00000540537 TUT1Q9H6E5 874 aaKnown RBP24.07■■□□□ 1.44
CHFR-217ENST00000540537 EYSQ5T1H1 3165 aa24.06■■□□□ 1.44
CHFR-217ENST00000540537 NEFLP07196 543 aa24.06■■□□□ 1.44
CHFR-217ENST00000540537 CKBP12277 381 aa24.06■■□□□ 1.44
CHFR-217ENST00000540537 FGD1P98174 961 aa24.06■■□□□ 1.44
CHFR-217ENST00000540537 JAKMIP1Q96N16 626 aaKnown RBP24.06■■□□□ 1.44
CHFR-217ENST00000540537 EHMT1Q9H9B1 1298 aa24.06■■□□□ 1.44
CHFR-217ENST00000540537 FAM217BQ9NTX9 383 aaPredicted RBP24.06■■□□□ 1.44
CHFR-217ENST00000540537 PCDHA6Q9UN73 950 aa24.06■■□□□ 1.44
CHFR-217ENST00000540537 YBX2Q9Y2T7 364 aaKnown RBP24.06■■□□□ 1.44
CHFR-217ENST00000540537 PCDHA8Q9Y5H6 950 aa24.06■■□□□ 1.44
CHFR-217ENST00000540537 PCDHA11Q9Y5I1 949 aa24.06■■□□□ 1.44
CHFR-217ENST00000540537 SNX14Q9Y5W7 946 aa24.06■■□□□ 1.44
CHFR-217ENST00000540537 BAIAP3O94812 1187 aa24.05■■□□□ 1.44
CHFR-217ENST00000540537 HOXC8P31273 242 aa24.05■■□□□ 1.44
CHFR-217ENST00000540537 NAPAP54920 295 aa24.05■■□□□ 1.44
CHFR-217ENST00000540537 ZNF200P98182 395 aaPredicted RBP24.05■■□□□ 1.44
CHFR-217ENST00000540537 TRIM71Q2Q1W2 868 aaKnown RBP24.05■■□□□ 1.44
CHFR-217ENST00000540537 SLC9A7Q96T83 725 aa24.05■■□□□ 1.44
CHFR-217ENST00000540537 NKX2-4Q9H2Z4 354 aa24.05■■□□□ 1.44
CHFR-217ENST00000540537 V9GY48 417 aaPredicted RBP24.05■■□□□ 1.44
CHFR-217ENST00000540537 C17orf102A2RUQ5 167 aa24.04■■□□□ 1.44
CHFR-217ENST00000540537 CPA1P15085 419 aa24.04■■□□□ 1.44
CHFR-217ENST00000540537 ITGB5P18084 799 aa24.04■■□□□ 1.44
CHFR-217ENST00000540537 CDC27P30260 824 aa24.04■■□□□ 1.44
CHFR-217ENST00000540537 RABGGTBP53611 331 aa24.04■■□□□ 1.44
CHFR-217ENST00000540537 HIC1Q14526 733 aa24.04■■□□□ 1.44
CHFR-217ENST00000540537 GPNMBQ14956 572 aa24.04■■□□□ 1.44
CHFR-217ENST00000540537 TYW1BQ6NUM6 668 aa24.04■■□□□ 1.44
CHFR-217ENST00000540537 BLOC1S2Q6QNY1 142 aa24.04■■□□□ 1.44
CHFR-217ENST00000540537 FBXL16Q8N461 479 aa24.04■■□□□ 1.44
CHFR-217ENST00000540537 PHOSPHO2Q8TCD6 241 aa24.04■■□□□ 1.44
CHFR-217ENST00000540537 SLC28A3Q9HAS3 691 aa24.04■■□□□ 1.44
CHFR-217ENST00000540537 RIC8AQ9NPQ8 531 aa24.04■■□□□ 1.44
CHFR-217ENST00000540537 UBIAD1Q9Y5Z9 338 aa24.04■■□□□ 1.44
CHFR-217ENST00000540537 UNC80Q8N2C7 3258 aa24.04■■□□□ 1.44
CHFR-217ENST00000540537 CCDC196A0A1B0GTZ2 297 aa24.03■■□□□ 1.44
CHFR-217ENST00000540537 CXCL10P02778 98 aa24.03■■□□□ 1.44
CHFR-217ENST00000540537 SMIM10L2AP0DMW4 78 aa24.03■■□□□ 1.44
CHFR-217ENST00000540537 SMIM10L2BP0DMW5 78 aa24.03■■□□□ 1.44
CHFR-217ENST00000540537 KCNA2P16389 499 aa24.03■■□□□ 1.44
CHFR-217ENST00000540537 METAP2P50579 478 aaKnown RBP eCLIP24.03■■□□□ 1.44
CHFR-217ENST00000540537 Q6ZUG5 572 aa24.03■■□□□ 1.44
CHFR-217ENST00000540537 SERINC5Q86VE9 423 aa24.03■■□□□ 1.44
CHFR-217ENST00000540537 WNT8BQ93098 351 aa24.03■■□□□ 1.44
CHFR-217ENST00000540537 BARHL2Q9NY43 387 aa24.03■■□□□ 1.44
CHFR-217ENST00000540537 ZNF215Q9UL58 517 aaPredicted RBP24.03■■□□□ 1.44
CHFR-217ENST00000540537 PRUNE2Q8WUY3 3088 aa24.03■■□□□ 1.44
CHFR-217ENST00000540537 CHD7Q9P2D1 2997 aa24.02■■□□□ 1.44
CHFR-217ENST00000540537 STXBP3O00186 592 aa24.02■■□□□ 1.44
CHFR-217ENST00000540537 MAFGO15525 162 aa24.02■■□□□ 1.44
CHFR-217ENST00000540537 EPB41L2O43491 1005 aaKnown RBP24.02■■□□□ 1.44
CHFR-217ENST00000540537 ADCY7P51828 1080 aa24.02■■□□□ 1.44
CHFR-217ENST00000540537 APOBRQ0VD83 1088 aa24.02■■□□□ 1.44
CHFR-217ENST00000540537 MTMR1Q13613 665 aa24.02■■□□□ 1.44
CHFR-217ENST00000540537 TRAF7Q6Q0C0 670 aa24.02■■□□□ 1.44
CHFR-217ENST00000540537 BRF1Q92994 677 aa24.02■■□□□ 1.44
CHFR-217ENST00000540537 GLT8D2Q9H1C3 349 aa24.02■■□□□ 1.44
CHFR-217ENST00000540537 JADE2Q9NQC1 790 aa24.02■■□□□ 1.44
CHFR-217ENST00000540537 NAP1L2Q9ULW6 460 aaPredicted RBP24.02■■□□□ 1.44
CHFR-217ENST00000540537 NID2Q14112 1375 aa24.02■■□□□ 1.44
CHFR-217ENST00000540537 NBNO60934 754 aa24.01■■□□□ 1.43
CHFR-217ENST00000540537 ATP9AO75110 1047 aa24.01■■□□□ 1.43
CHFR-217ENST00000540537 FOSP01100 380 aaPredicted RBP24.01■■□□□ 1.43
CHFR-217ENST00000540537 RPS6KB1P23443 525 aa24.01■■□□□ 1.43
CHFR-217ENST00000540537 PSMA5P28066 241 aa24.01■■□□□ 1.43
CHFR-217ENST00000540537 SP4Q02446 784 aa24.01■■□□□ 1.43
CHFR-217ENST00000540537 ZNF618Q5T7W0 954 aa24.01■■□□□ 1.43
CHFR-217ENST00000540537 CNKSR3Q6P9H4 555 aa24.01■■□□□ 1.43
CHFR-217ENST00000540537 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.01■■□□□ 1.43
CHFR-217ENST00000540537 ATP6V0A1Q93050 837 aa24.01■■□□□ 1.43
CHFR-217ENST00000540537 GAS2L1Q99501 681 aaPredicted RBP24.01■■□□□ 1.43
CHFR-217ENST00000540537 AGXT2Q9BYV1 514 aa24.01■■□□□ 1.43
CHFR-217ENST00000540537 TELO2Q9Y4R8 837 aa24.01■■□□□ 1.43
CHFR-217ENST00000540537 KAT6AQ92794 2004 aa24■■□□□ 1.43
CHFR-217ENST00000540537 ADD1P35611 737 aaKnown RBP24■■□□□ 1.43
CHFR-217ENST00000540537 UTP14CQ5TAP6 766 aaKnown RBP24■■□□□ 1.43
CHFR-217ENST00000540537 TRIM50Q86XT4 487 aa24■■□□□ 1.43
CHFR-217ENST00000540537 RNPEPQ9H4A4 650 aa24■■□□□ 1.43
CHFR-217ENST00000540537 PRDM12Q9H4Q4 367 aa24■■□□□ 1.43
CHFR-217ENST00000540537 SMCO2A6NFE2 343 aa23.99■■□□□ 1.43
CHFR-217ENST00000540537 GNAT1P11488 350 aa23.99■■□□□ 1.43
CHFR-217ENST00000540537 MYOGP15173 224 aa23.99■■□□□ 1.43
CHFR-217ENST00000540537 KCNJ6P48051 423 aa23.99■■□□□ 1.43
CHFR-217ENST00000540537 AP3B2Q13367 1082 aa23.99■■□□□ 1.43
CHFR-217ENST00000540537 PPP2R2DQ66LE6 453 aa23.99■■□□□ 1.43
CHFR-217ENST00000540537 HERC6Q8IVU3 1022 aa23.99■■□□□ 1.43
CHFR-217ENST00000540537 ANO3Q9BYT9 981 aa23.99■■□□□ 1.43
CHFR-217ENST00000540537 TREHO43280 583 aa23.98■■□□□ 1.43
CHFR-217ENST00000540537 CAND2O75155 1236 aa23.98■■□□□ 1.43
CHFR-217ENST00000540537 TCF7P36402 384 aaPredicted RBP23.98■■□□□ 1.43
CHFR-217ENST00000540537 THPOP40225 353 aa23.98■■□□□ 1.43
CHFR-217ENST00000540537 CLK2P49760 499 aaKnown RBP23.98■■□□□ 1.43
CHFR-217ENST00000540537 PFKFB3Q16875 520 aaPredicted RBP23.98■■□□□ 1.43
CHFR-217ENST00000540537 SEPT1Q8WYJ6 367 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms