RNA–Protein interactions for RNA: ENST00000540491.1

SOD2-212, Transcript of superoxide dismutase 2, humanhuman

TSL 3

Gene SOD2, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-212ENST00000540491 RRP36Q96EU6 259 aaKnown RBP22.22■■□□□ 1.15
SOD2-212ENST00000540491 ZNF215Q9UL58 517 aaPredicted RBP22.22■■□□□ 1.15
SOD2-212ENST00000540491 LPXNO60711 386 aa22.21■■□□□ 1.15
SOD2-212ENST00000540491 MRPS9P82933 396 aaKnown RBP22.21■■□□□ 1.15
SOD2-212ENST00000540491 ZNF200P98182 395 aaPredicted RBP22.21■■□□□ 1.15
SOD2-212ENST00000540491 TFF2Q03403 129 aa22.21■■□□□ 1.15
SOD2-212ENST00000540491 PLEKHG4Q58EX7 1191 aa22.21■■□□□ 1.15
SOD2-212ENST00000540491 PCNX4Q63HM2 1172 aa22.21■■□□□ 1.15
SOD2-212ENST00000540491 CASC1Q6TDU7 716 aa22.21■■□□□ 1.15
SOD2-212ENST00000540491 CDHR1Q96JP9 859 aa22.21■■□□□ 1.15
SOD2-212ENST00000540491 SAMD11Q96NU1 681 aa22.21■■□□□ 1.15
SOD2-212ENST00000540491 C1QTNF1Q9BXJ1 281 aa22.21■■□□□ 1.15
SOD2-212ENST00000540491 SEC63Q9UGP8 760 aaKnown RBP22.21■■□□□ 1.15
SOD2-212ENST00000540491 XIRP2A4UGR9 3374 aa22.21■■□□□ 1.15
SOD2-212ENST00000540491 TRANK1O15050 2925 aa22.21■■□□□ 1.15
SOD2-212ENST00000540491 LCHNA4D1U4 455 aa22.2■■□□□ 1.14
SOD2-212ENST00000540491 SMIM10L2AP0DMW4 78 aa22.2■■□□□ 1.14
SOD2-212ENST00000540491 SMIM10L2BP0DMW5 78 aa22.2■■□□□ 1.14
SOD2-212ENST00000540491 MBTPS1Q14703 1052 aa22.2■■□□□ 1.14
SOD2-212ENST00000540491 NLRX1Q86UT6 975 aa22.2■■□□□ 1.14
SOD2-212ENST00000540491 MB21D2Q8IYB1 491 aaPredicted RBP22.2■■□□□ 1.14
SOD2-212ENST00000540491 DBF4BQ8NFT6 615 aa22.2■■□□□ 1.14
SOD2-212ENST00000540491 SMARCC2Q8TAQ2 1214 aa22.2■■□□□ 1.14
SOD2-212ENST00000540491 SEPT8Q92599 483 aa22.2■■□□□ 1.14
SOD2-212ENST00000540491 WNT8BQ93098 351 aa22.2■■□□□ 1.14
SOD2-212ENST00000540491 RNPEPQ9H4A4 650 aa22.2■■□□□ 1.14
SOD2-212ENST00000540491 LINC01553A4QN01 128 aa22.19■■□□□ 1.14
SOD2-212ENST00000540491 CALM1P0DP23 149 aa22.19■■□□□ 1.14
SOD2-212ENST00000540491 CALM2P0DP24 149 aa22.19■■□□□ 1.14
SOD2-212ENST00000540491 CALM3P0DP25 149 aa22.19■■□□□ 1.14
SOD2-212ENST00000540491 MKRN4PQ13434 485 aaPredicted RBP22.19■■□□□ 1.14
SOD2-212ENST00000540491 APBB2Q92870 758 aa22.19■■□□□ 1.14
SOD2-212ENST00000540491 TMEM87BQ96K49 555 aa22.19■■□□□ 1.14
SOD2-212ENST00000540491 GPR20Q99678 358 aa22.19■■□□□ 1.14
SOD2-212ENST00000540491 SUGCTQ9HAC7 445 aa22.19■■□□□ 1.14
SOD2-212ENST00000540491 SENP2Q9HC62 589 aa22.19■■□□□ 1.14
SOD2-212ENST00000540491 MYH7BA7E2Y1 1941 aa22.19■■□□□ 1.14
SOD2-212ENST00000540491 COL9A1P20849 921 aa22.18■■□□□ 1.14
SOD2-212ENST00000540491 HTRA4P83105 476 aaPredicted RBP22.18■■□□□ 1.14
SOD2-212ENST00000540491 HIC1Q14526 733 aa22.18■■□□□ 1.14
SOD2-212ENST00000540491 CYFIP1Q7L576 1253 aa22.18■■□□□ 1.14
SOD2-212ENST00000540491 TEX2Q8IWB9 1127 aa22.18■■□□□ 1.14
SOD2-212ENST00000540491 ZNF654Q8IZM8 581 aa22.18■■□□□ 1.14
SOD2-212ENST00000540491 GPKOWQ92917 476 aaPredicted RBP eCLIP22.18■■□□□ 1.14
SOD2-212ENST00000540491 BAZ2BQ9UIF8 2168 aaKnown RBP22.18■■□□□ 1.14
SOD2-212ENST00000540491 NRCAMQ92823 1304 aa22.17■■□□□ 1.14
SOD2-212ENST00000540491 TREHO43280 583 aa22.17■■□□□ 1.14
SOD2-212ENST00000540491 MCM5P33992 734 aa22.17■■□□□ 1.14
SOD2-212ENST00000540491 KCNQ1P51787 676 aa22.17■■□□□ 1.14
SOD2-212ENST00000540491 ANTXR2P58335 489 aa22.17■■□□□ 1.14
SOD2-212ENST00000540491 TCTN1Q2MV58 587 aa22.17■■□□□ 1.14
SOD2-212ENST00000540491 KRT40Q6A162 431 aa22.17■■□□□ 1.14
SOD2-212ENST00000540491 RPAINQ86UA6 219 aa22.17■■□□□ 1.14
SOD2-212ENST00000540491 SP7Q8TDD2 431 aaPredicted RBP22.17■■□□□ 1.14
SOD2-212ENST00000540491 GPRASP2Q96D09 838 aa22.17■■□□□ 1.14
SOD2-212ENST00000540491 LY9Q9HBG7 655 aa22.17■■□□□ 1.14
SOD2-212ENST00000540491 SUPT16HQ9Y5B9 1047 aaKnown RBP22.17■■□□□ 1.14
SOD2-212ENST00000540491 RBM8AQ9Y5S9 174 aaKnown RBP22.17■■□□□ 1.14
SOD2-212ENST00000540491 MAFGO15525 162 aa22.16■■□□□ 1.14
SOD2-212ENST00000540491 SORBS3O60504 671 aa22.16■■□□□ 1.14
SOD2-212ENST00000540491 RPLP2P05387 115 aaKnown RBP22.16■■□□□ 1.14
SOD2-212ENST00000540491 LIFRP42702 1097 aa22.16■■□□□ 1.14
SOD2-212ENST00000540491 TMCO2Q7Z6W1 182 aaPredicted RBP22.16■■□□□ 1.14
SOD2-212ENST00000540491 MYOCDQ8IZQ8 938 aa22.16■■□□□ 1.14
SOD2-212ENST00000540491 TOP1MTQ969P6 601 aa22.16■■□□□ 1.14
SOD2-212ENST00000540491 RTEL1Q9NZ71 1219 aa22.16■■□□□ 1.14
SOD2-212ENST00000540491 MEIS2O14770 477 aa22.15■■□□□ 1.14
SOD2-212ENST00000540491 ADAM17P78536 824 aa22.15■■□□□ 1.14
SOD2-212ENST00000540491 SEMA3FQ13275 785 aa22.15■■□□□ 1.14
SOD2-212ENST00000540491 PTPROQ16827 1216 aa22.15■■□□□ 1.14
SOD2-212ENST00000540491 FAM26DQ5JW98 314 aa22.15■■□□□ 1.14
SOD2-212ENST00000540491 TAF2Q6P1X5 1199 aa22.15■■□□□ 1.14
SOD2-212ENST00000540491 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.15■■□□□ 1.145e-7■□□□□ 9.5
SOD2-212ENST00000540491 GDPD5Q8WTR4 605 aa22.15■■□□□ 1.14
SOD2-212ENST00000540491 ZFP91Q96JP5 570 aaPredicted RBP22.15■■□□□ 1.14
SOD2-212ENST00000540491 PSTPIP2Q9H939 334 aa22.15■■□□□ 1.14
SOD2-212ENST00000540491 BDP1A6H8Y1 2624 aa22.15■■□□□ 1.14
SOD2-212ENST00000540491 CCDC69A6NI79 296 aa22.14■■□□□ 1.13
SOD2-212ENST00000540491 USP17L6PQ6QN14 398 aa22.14■■□□□ 1.13
SOD2-212ENST00000540491 NFXL1Q6ZNB6 911 aa22.14■■□□□ 1.13
SOD2-212ENST00000540491 FBXO22Q8NEZ5 403 aa22.14■■□□□ 1.13
SOD2-212ENST00000540491 SETD4Q9NVD3 440 aa22.14■■□□□ 1.13
SOD2-212ENST00000540491 TAF6LQ9Y6J9 622 aa22.14■■□□□ 1.13
SOD2-212ENST00000540491 PRC1O43663 620 aa22.13■■□□□ 1.13
SOD2-212ENST00000540491 FAM117BQ6P1L5 589 aa22.13■■□□□ 1.13
SOD2-212ENST00000540491 SPRED2Q7Z698 418 aa22.13■■□□□ 1.13
SOD2-212ENST00000540491 RSPH3Q86UC2 560 aa22.13■■□□□ 1.13
SOD2-212ENST00000540491 PIBF1Q8WXW3 757 aa22.13■■□□□ 1.13
SOD2-212ENST00000540491 SEPT1Q8WYJ6 367 aa22.13■■□□□ 1.13
SOD2-212ENST00000540491 TNPO1Q92973 898 aaKnown RBP22.13■■□□□ 1.13
SOD2-212ENST00000540491 NECAB3Q96P71 396 aaPredicted RBP22.13■■□□□ 1.13
SOD2-212ENST00000540491 YME1L1Q96TA2 773 aa22.13■■□□□ 1.13
SOD2-212ENST00000540491 BCAS3Q9H6U6 928 aa22.13■■□□□ 1.13
SOD2-212ENST00000540491 MTUS1Q9ULD2 1270 aa22.13■■□□□ 1.13
SOD2-212ENST00000540491 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.12■■□□□ 1.13
SOD2-212ENST00000540491 MRPL38Q96DV4 380 aaKnown RBP22.12■■□□□ 1.13
SOD2-212ENST00000540491 EHMT1Q9H9B1 1298 aa22.12■■□□□ 1.13
SOD2-212ENST00000540491 PTPRSQ13332 1948 aa22.12■■□□□ 1.13
SOD2-212ENST00000540491 SH2B2O14492 632 aaPredicted RBP22.11■■□□□ 1.13
SOD2-212ENST00000540491 ARHGAP4P98171 946 aa22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms