RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 C10orf67Q8IYJ2 551 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 SDR16C5Q8N3Y7 309 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.55□□□□□ -1.52
MDM2-226ENST00000540352 GOLGA5Q8TBA6 731 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 SNX21Q969T3 373 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 MRGPRX3Q96LB0 322 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 JMJD8Q96S16 334 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 DIRC2Q96SL1 478 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 TMX4Q9H1E5 349 aaPredicted RBP5.55□□□□□ -1.52
MDM2-226ENST00000540352 TOMM22Q9NS69 142 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 IMPACTQ9P2X3 320 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 BRD4O60885 1362 aaPredicted RBP5.55□□□□□ -1.52
MDM2-226ENST00000540352 DHX29Q7Z478 1369 aaKnown RBP5.55□□□□□ -1.52
MDM2-226ENST00000540352 CGNL1Q0VF96 1302 aa5.55□□□□□ -1.52
MDM2-226ENST00000540352 SOGA1O94964 1423 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 TRBV23OR9-2A0A075B6M9 112 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 NPHP3-ACAD11A0A0J9YXS1 232 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 ZNF503-AS2A6NEH8 195 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 PDPK1O15530 556 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 SGSM2O43147 1006 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 HTATSF1O43719 755 aaKnown RBP5.54□□□□□ -1.52
MDM2-226ENST00000540352 PRKCAP17252 672 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 PAMP19021 973 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 ECI1P42126 302 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 MAGEA8P43361 318 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 ICA1Q05084 483 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 IFRD2Q12894 506 aaPredicted RBP5.54□□□□□ -1.52
MDM2-226ENST00000540352 BMS1Q14692 1282 aaKnown RBP5.54□□□□□ -1.52
MDM2-226ENST00000540352 SNX17Q15036 470 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 PDCD2Q16342 344 aaPredicted RBP5.54□□□□□ -1.52
MDM2-226ENST00000540352 ADGRF1Q5T601 910 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 AP1ARQ63HQ0 302 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 GIMAP6Q6P9H5 292 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 TMEM52Q8NDY8 209 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 ST13P5Q8NFI4 369 aaPredicted RBP5.54□□□□□ -1.52
MDM2-226ENST00000540352 INTS4Q96HW7 963 aaKnown RBP5.54□□□□□ -1.52
MDM2-226ENST00000540352 SRPK1Q96SB4 655 aaKnown RBP5.54□□□□□ -1.52
MDM2-226ENST00000540352 NKX2-4Q9H2Z4 354 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 TMX1Q9H3N1 280 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 NSUN3Q9H649 340 aaKnown RBP5.54□□□□□ -1.52
MDM2-226ENST00000540352 SP110Q9HB58 689 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 GPRC5CQ9NQ84 441 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 A1CFQ9NQ94 594 aaKnown RBP5.54□□□□□ -1.52
MDM2-226ENST00000540352 ZNF446Q9NWS9 450 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 CLEC1BQ9P126 229 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 PFDN2Q9UHV9 154 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 YBX2Q9Y2T7 364 aaKnown RBP5.54□□□□□ -1.52
MDM2-226ENST00000540352 RRP15Q9Y3B9 282 aaKnown RBP5.54□□□□□ -1.52
MDM2-226ENST00000540352 RTEL1-TNFRSF6BF6WH68 1400 aa5.54□□□□□ -1.52
MDM2-226ENST00000540352 SMC2O95347 1197 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 THBDP07204 575 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 PLS3P13797 630 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 TNNT1P13805 278 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 L1CAMP32004 1257 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 RWDD2BP57060 319 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 PPP2R2AP63151 447 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 CYP4F8P98187 520 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 ZRSR1Q15695 479 aaKnown RBP5.53□□□□□ -1.52
MDM2-226ENST00000540352 ZSCAN23Q3MJ62 389 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 CCDC30Q5VVM6 783 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 WWC2Q6AWC2 1192 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 TTLL5Q6EMB2 1281 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 LRSAM1Q6UWE0 723 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 DDX46Q7L014 1031 aaKnown RBP5.53□□□□□ -1.52
MDM2-226ENST00000540352 NLRX1Q86UT6 975 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 CPNE8Q86YQ8 564 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 LRRC47Q8N1G4 583 aaKnown RBP5.53□□□□□ -1.52
MDM2-226ENST00000540352 CCDC191Q8NCU4 936 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 FBXO18Q8NFZ0 1043 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 DEPDC7Q96QD5 511 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 SH3GL3Q99963 347 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 EPB41L4BQ9H329 900 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 CYP26B1Q9NR63 512 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 PSD3Q9NYI0 1048 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.53□□□□□ -1.52
MDM2-226ENST00000540352 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.53□□□□□ -1.52
MDM2-226ENST00000540352 SHROOM2Q13796 1616 aa5.53□□□□□ -1.52
MDM2-226ENST00000540352 A0A1W2PQU0 124 aa5.52□□□□□ -1.53
MDM2-226ENST00000540352 NOTOA8MTQ0 251 aa5.52□□□□□ -1.53
MDM2-226ENST00000540352 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.52□□□□□ -1.53
MDM2-226ENST00000540352 PPFIA2O75334 1257 aa5.52□□□□□ -1.53
MDM2-226ENST00000540352 SCP2P22307 547 aa5.52□□□□□ -1.53
MDM2-226ENST00000540352 TACR1P25103 407 aa5.52□□□□□ -1.53
MDM2-226ENST00000540352 POLD1P28340 1107 aa5.52□□□□□ -1.53
MDM2-226ENST00000540352 HOXC12P31275 282 aa5.52□□□□□ -1.53
MDM2-226ENST00000540352 ABCD1P33897 745 aa5.52□□□□□ -1.53
MDM2-226ENST00000540352 GYS2P54840 703 aa5.52□□□□□ -1.53
MDM2-226ENST00000540352 SSRP1Q08945 709 aaKnown RBP5.52□□□□□ -1.53
MDM2-226ENST00000540352 RASGRF1Q13972 1273 aa5.52□□□□□ -1.53
MDM2-226ENST00000540352 KIR3DS1Q14943 382 aa5.52□□□□□ -1.53
MDM2-226ENST00000540352 PRSS53Q2L4Q9 553 aa5.52□□□□□ -1.53
MDM2-226ENST00000540352 SPTY2D1Q68D10 685 aaPredicted RBP5.52□□□□□ -1.53
MDM2-226ENST00000540352 KRBA2Q6ZNG9 492 aa5.52□□□□□ -1.53
MDM2-226ENST00000540352 PRR23BQ6ZRT6 265 aa5.52□□□□□ -1.53
MDM2-226ENST00000540352 NOP9Q86U38 636 aaKnown RBP5.52□□□□□ -1.53
MDM2-226ENST00000540352 EFCAB13Q8IY85 973 aa5.52□□□□□ -1.53
MDM2-226ENST00000540352 FAM177A1Q8N128 213 aaPredicted RBP5.52□□□□□ -1.53
MDM2-226ENST00000540352 AARSD1Q9BTE6 412 aaKnown RBP5.52□□□□□ -1.53
MDM2-226ENST00000540352 IER2Q9BTL4 223 aa5.52□□□□□ -1.53
MDM2-226ENST00000540352 FAM107BQ9H098 131 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms