RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 MTMR1Q13613 665 aa17.22■□□□□ 0.35
UBE3B-212ENST00000540230 MFSD10Q14728 455 aa17.22■□□□□ 0.35
UBE3B-212ENST00000540230 ME3Q16798 604 aa17.22■□□□□ 0.35
UBE3B-212ENST00000540230 KIAA0753Q2KHM9 967 aa17.22■□□□□ 0.35
UBE3B-212ENST00000540230 GDF6Q6KF10 455 aaPredicted RBP17.22■□□□□ 0.35
UBE3B-212ENST00000540230 MFSD5Q6N075 450 aa17.22■□□□□ 0.35
UBE3B-212ENST00000540230 TRIM50Q86XT4 487 aa17.22■□□□□ 0.35
UBE3B-212ENST00000540230 TEX2Q8IWB9 1127 aa17.22■□□□□ 0.35
UBE3B-212ENST00000540230 NECAB1Q8N987 351 aa17.22■□□□□ 0.35
UBE3B-212ENST00000540230 CRYGNQ8WXF5 182 aa17.22■□□□□ 0.35
UBE3B-212ENST00000540230 GPR20Q99678 358 aa17.22■□□□□ 0.35
UBE3B-212ENST00000540230 SENP7Q9BQF6 1050 aa17.22■□□□□ 0.35
UBE3B-212ENST00000540230 MXRA8Q9BRK3 442 aa17.22■□□□□ 0.35
UBE3B-212ENST00000540230 GLT8D2Q9H1C3 349 aa17.22■□□□□ 0.35
UBE3B-212ENST00000540230 WNT8AQ9H1J5 351 aa17.22■□□□□ 0.35
UBE3B-212ENST00000540230 C6orf50Q9HD87 102 aa17.22■□□□□ 0.35
UBE3B-212ENST00000540230 EIF5BO60841 1220 aaKnown RBP17.21■□□□□ 0.35
UBE3B-212ENST00000540230 DEXIO95424 95 aa17.21■□□□□ 0.35
UBE3B-212ENST00000540230 LGALS2P05162 132 aa17.21■□□□□ 0.35
UBE3B-212ENST00000540230 ARP10275 920 aa17.21■□□□□ 0.35
UBE3B-212ENST00000540230 CCL23P55773 120 aa17.21■□□□□ 0.35
UBE3B-212ENST00000540230 ARHGAP4P98171 946 aa17.21■□□□□ 0.35
UBE3B-212ENST00000540230 HIC1Q14526 733 aa17.21■□□□□ 0.35
UBE3B-212ENST00000540230 TRIM22Q8IYM9 498 aa17.21■□□□□ 0.35
UBE3B-212ENST00000540230 REXO1Q8N1G1 1221 aaKnown RBP17.21■□□□□ 0.35
UBE3B-212ENST00000540230 CCDC12Q8WUD4 166 aaPredicted RBP17.21■□□□□ 0.35
UBE3B-212ENST00000540230 KIF2CQ99661 725 aa17.21■□□□□ 0.35
UBE3B-212ENST00000540230 HDAC6Q9UBN7 1215 aa17.21■□□□□ 0.35
UBE3B-212ENST00000540230 TRIP12Q14669 1992 aaPredicted RBP17.21■□□□□ 0.35
UBE3B-212ENST00000540230 SCN5AQ14524 2016 aa17.21■□□□□ 0.35
UBE3B-212ENST00000540230 NOP56O00567 594 aaKnown RBP17.21■□□□□ 0.34
UBE3B-212ENST00000540230 EDIL3O43854 480 aa17.21■□□□□ 0.34
UBE3B-212ENST00000540230 PTPN11Q06124 597 aaPredicted RBP17.21■□□□□ 0.34
UBE3B-212ENST00000540230 ANKRD1Q15327 319 aa17.21■□□□□ 0.34
UBE3B-212ENST00000540230 LRIT3Q3SXY7 679 aa17.21■□□□□ 0.34
UBE3B-212ENST00000540230 C16orf59Q7L2K0 433 aa17.21■□□□□ 0.34
UBE3B-212ENST00000540230 SESTD1Q86VW0 696 aa17.21■□□□□ 0.34
UBE3B-212ENST00000540230 CCDC148Q8NFR7 591 aa17.21■□□□□ 0.34
UBE3B-212ENST00000540230 KCNH7Q9NS40 1196 aa17.21■□□□□ 0.34
UBE3B-212ENST00000540230 GTF2IRD1Q9UHL9 959 aa17.21■□□□□ 0.34
UBE3B-212ENST00000540230 FAM86B1E9PN63 330 aa17.2■□□□□ 0.34
UBE3B-212ENST00000540230 FAM86B2P0C5J1 330 aa17.2■□□□□ 0.34
UBE3B-212ENST00000540230 ACRP10323 421 aa17.2■□□□□ 0.34
UBE3B-212ENST00000540230 GNA11P29992 359 aa17.2■□□□□ 0.34
UBE3B-212ENST00000540230 ZNF200P98182 395 aaPredicted RBP17.2■□□□□ 0.34
UBE3B-212ENST00000540230 ST3GAL1Q11201 340 aa17.2■□□□□ 0.34
UBE3B-212ENST00000540230 NPY5RQ15761 445 aa17.2■□□□□ 0.34
UBE3B-212ENST00000540230 CEP55Q53EZ4 464 aa17.2■□□□□ 0.34
UBE3B-212ENST00000540230 CPLX2Q6PUV4 134 aaKnown RBP17.2■□□□□ 0.34
UBE3B-212ENST00000540230 VWCEQ96DN2 955 aa17.2■□□□□ 0.34
UBE3B-212ENST00000540230 SCLYQ96I15 445 aa17.2■□□□□ 0.34
UBE3B-212ENST00000540230 CDHR1Q96JP9 859 aa17.2■□□□□ 0.34
UBE3B-212ENST00000540230 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.2■□□□□ 0.343e-6■■■■■ 30.2
UBE3B-212ENST00000540230 KATNAL1Q9BW62 490 aa17.2■□□□□ 0.34
UBE3B-212ENST00000540230 TANC1Q9C0D5 1861 aa17.2■□□□□ 0.34
UBE3B-212ENST00000540230 SH3GLB2Q9NR46 395 aa17.2■□□□□ 0.34
UBE3B-212ENST00000540230 GJB4Q9NTQ9 266 aa17.2■□□□□ 0.34
UBE3B-212ENST00000540230 CDH23Q9H251 3354 aa17.19■□□□□ 0.34
UBE3B-212ENST00000540230 IGLV3-22A0A075B6J6 115 aa17.19■□□□□ 0.34
UBE3B-212ENST00000540230 SUPT20HL2P0C7V6 817 aa17.19■□□□□ 0.34
UBE3B-212ENST00000540230 NLRP5P59047 1200 aa17.19■□□□□ 0.34
UBE3B-212ENST00000540230 ITGB3BPQ13352 177 aaPredicted RBP17.19■□□□□ 0.34
UBE3B-212ENST00000540230 PTGISQ16647 500 aa17.19■□□□□ 0.34
UBE3B-212ENST00000540230 UTP14CQ5TAP6 766 aaKnown RBP17.19■□□□□ 0.34
UBE3B-212ENST00000540230 DHX38Q92620 1227 aaKnown RBP17.19■□□□□ 0.34
UBE3B-212ENST00000540230 UIMC1Q96RL1 719 aa17.19■□□□□ 0.34
UBE3B-212ENST00000540230 STK36Q9NRP7 1315 aa17.18■□□□□ 0.34
UBE3B-212ENST00000540230 GSTTP1A0A1W2PQM5 241 aa17.18■□□□□ 0.34
UBE3B-212ENST00000540230 H3BRB1 525 aa17.18■□□□□ 0.34
UBE3B-212ENST00000540230 MEIS1O00470 390 aa17.18■□□□□ 0.34
UBE3B-212ENST00000540230 SLC34A2O95436 690 aa17.18■□□□□ 0.34
UBE3B-212ENST00000540230 TMEM199Q8N511 208 aa17.18■□□□□ 0.34
UBE3B-212ENST00000540230 C7orf31Q8N865 590 aa17.18■□□□□ 0.34
UBE3B-212ENST00000540230 WNT8BQ93098 351 aa17.18■□□□□ 0.34
UBE3B-212ENST00000540230 GTF3C6Q969F1 213 aa17.18■□□□□ 0.34
UBE3B-212ENST00000540230 TUT1Q9H6E5 874 aaKnown RBP17.18■□□□□ 0.34
UBE3B-212ENST00000540230 AGO4Q9HCK5 861 aaKnown RBP17.18■□□□□ 0.34
UBE3B-212ENST00000540230 KCNJ14Q9UNX9 436 aa17.18■□□□□ 0.34
UBE3B-212ENST00000540230 M0R2N6 131 aa17.17■□□□□ 0.34
UBE3B-212ENST00000540230 MAFGO15525 162 aa17.17■□□□□ 0.34
UBE3B-212ENST00000540230 CYP3A4P08684 503 aa17.17■□□□□ 0.34
UBE3B-212ENST00000540230 FDPSP14324 419 aaKnown RBP17.17■□□□□ 0.34
UBE3B-212ENST00000540230 TCF7P36402 384 aaPredicted RBP17.17■□□□□ 0.34
UBE3B-212ENST00000540230 ZNF76P36508 570 aa17.17■□□□□ 0.34
UBE3B-212ENST00000540230 PPIGQ13427 754 aaKnown RBP eCLIP17.17■□□□□ 0.345e-6■■■■□ 20.2
UBE3B-212ENST00000540230 TMEM240Q5SV17 173 aa17.17■□□□□ 0.34
UBE3B-212ENST00000540230 GIMAP8Q8ND71 665 aaPredicted RBP17.17■□□□□ 0.34
UBE3B-212ENST00000540230 BICD2Q8TD16 824 aa17.17■□□□□ 0.34
UBE3B-212ENST00000540230 C22orf23Q9BZE7 217 aa17.17■□□□□ 0.34
UBE3B-212ENST00000540230 PCDHA4Q9UN74 947 aa17.17■□□□□ 0.34
UBE3B-212ENST00000540230 NOD1Q9Y239 953 aa17.17■□□□□ 0.34
UBE3B-212ENST00000540230 CDKL5O76039 1030 aa17.16■□□□□ 0.34
UBE3B-212ENST00000540230 PLA2G4DQ86XP0 818 aa17.16■□□□□ 0.34
UBE3B-212ENST00000540230 JPH1Q9HDC5 661 aaPredicted RBP17.16■□□□□ 0.34
UBE3B-212ENST00000540230 JAK2O60674 1132 aa17.16■□□□□ 0.34
UBE3B-212ENST00000540230 SMIM10L2AP0DMW4 78 aa17.16■□□□□ 0.34
UBE3B-212ENST00000540230 SMIM10L2BP0DMW5 78 aa17.16■□□□□ 0.34
UBE3B-212ENST00000540230 HOXC8P31273 242 aa17.16■□□□□ 0.34
UBE3B-212ENST00000540230 RBM25P49756 843 aaKnown RBP17.16■□□□□ 0.34
UBE3B-212ENST00000540230 MCTP2Q6DN12 878 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms