RNA–Protein interactions for RNA: ENST00000540122.5

PUDP-206, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 2 BASIC

Gene PUDP, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-206ENST00000540122 TMEM105Q8N8V8 129 aa18.2■□□□□ 0.5
PUDP-206ENST00000540122 PLVAPQ9BX97 442 aa18.2■□□□□ 0.5
PUDP-206ENST00000540122 GPCPD1Q9NPB8 672 aa18.2■□□□□ 0.5
PUDP-206ENST00000540122 WDR19Q8NEZ3 1342 aa18.2■□□□□ 0.5
PUDP-206ENST00000540122 DNAH14Q0VDD8 3507 aa18.19■□□□□ 0.5
PUDP-206ENST00000540122 RAB11FIP3O75154 756 aa18.19■□□□□ 0.5
PUDP-206ENST00000540122 ATF7P17544 494 aaPredicted RBP18.19■□□□□ 0.5
PUDP-206ENST00000540122 NOVP48745 357 aa18.19■□□□□ 0.5
PUDP-206ENST00000540122 MCTP2Q6DN12 878 aa18.19■□□□□ 0.5
PUDP-206ENST00000540122 ATP6V0A1Q93050 837 aa18.19■□□□□ 0.5
PUDP-206ENST00000540122 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.19■□□□□ 0.5
PUDP-206ENST00000540122 C17orf102A2RUQ5 167 aa18.18■□□□□ 0.5
PUDP-206ENST00000540122 RNF113AO15541 343 aaKnown RBP18.18■□□□□ 0.5
PUDP-206ENST00000540122 CAND2O75155 1236 aa18.18■□□□□ 0.5
PUDP-206ENST00000540122 BTG3Q14201 252 aaPredicted RBP18.18■□□□□ 0.5
PUDP-206ENST00000540122 STXBP2Q15833 593 aa18.18■□□□□ 0.5
PUDP-206ENST00000540122 ZBTB33Q86T24 672 aa18.18■□□□□ 0.5
PUDP-206ENST00000540122 RBM23Q86U06 439 aaKnown RBP18.18■□□□□ 0.5
PUDP-206ENST00000540122 KBTBD3Q8NAB2 608 aa18.18■□□□□ 0.5
PUDP-206ENST00000540122 RGS22Q8NE09 1264 aa18.18■□□□□ 0.5
PUDP-206ENST00000540122 SUSD6Q92537 303 aa18.18■□□□□ 0.5
PUDP-206ENST00000540122 TAAR1Q96RJ0 339 aa18.18■□□□□ 0.5
PUDP-206ENST00000540122 NACAP1Q9BZK3 213 aa18.18■□□□□ 0.5
PUDP-206ENST00000540122 TREHO43280 583 aa18.17■□□□□ 0.5
PUDP-206ENST00000540122 PPFIA4O75335 1185 aa18.17■□□□□ 0.5
PUDP-206ENST00000540122 HOXC8P31273 242 aa18.17■□□□□ 0.5
PUDP-206ENST00000540122 NSUN6Q8TEA1 469 aaKnown RBP18.17■□□□□ 0.5
PUDP-206ENST00000540122 P2RX5Q93086 422 aa18.17■□□□□ 0.5
PUDP-206ENST00000540122 ZNF689Q96CS4 500 aaPredicted RBP18.17■□□□□ 0.5
PUDP-206ENST00000540122 RMDN1Q96DB5 314 aa18.17■□□□□ 0.5
PUDP-206ENST00000540122 NAPBQ9H115 298 aa18.17■□□□□ 0.5
PUDP-206ENST00000540122 COL20A1Q9P218 1284 aa18.17■□□□□ 0.5
PUDP-206ENST00000540122 MRVI1Q9Y6F6 885 aa18.17■□□□□ 0.5
PUDP-206ENST00000540122 ZFHX4Q86UP3 3567 aa18.17■□□□□ 0.5
PUDP-206ENST00000540122 ITGB1P05556 798 aa18.16■□□□□ 0.5
PUDP-206ENST00000540122 USH1GQ495M9 461 aa18.16■□□□□ 0.5
PUDP-206ENST00000540122 DGLUCYQ7Z3D6 616 aa18.16■□□□□ 0.5
PUDP-206ENST00000540122 SPPL3Q8TCT6 385 aa18.16■□□□□ 0.5
PUDP-206ENST00000540122 SYTL5Q8TDW5 730 aaPredicted RBP18.16■□□□□ 0.5
PUDP-206ENST00000540122 TBC1D5Q92609 795 aa18.16■□□□□ 0.5
PUDP-206ENST00000540122 IWS1Q96ST2 819 aa18.16■□□□□ 0.5
PUDP-206ENST00000540122 C16orf70Q9BSU1 422 aa18.16■□□□□ 0.5
PUDP-206ENST00000540122 DMXL1Q9Y485 3027 aa18.15■□□□□ 0.5
PUDP-206ENST00000540122 SMIM10L2AP0DMW4 78 aa18.15■□□□□ 0.5
PUDP-206ENST00000540122 SMIM10L2BP0DMW5 78 aa18.15■□□□□ 0.5
PUDP-206ENST00000540122 HSDL1Q3SXM5 330 aa18.15■□□□□ 0.5
PUDP-206ENST00000540122 SIRT2Q8IXJ6 389 aa18.15■□□□□ 0.5
PUDP-206ENST00000540122 PCDHGC5Q9Y5F6 944 aa18.15■□□□□ 0.5
PUDP-206ENST00000540122 MRPL42Q9Y6G3 142 aaKnown RBP18.15■□□□□ 0.5
PUDP-206ENST00000540122 KIAA1217Q5T5P2 1943 aa18.14■□□□□ 0.49
PUDP-206ENST00000540122 SORBS3O60504 671 aa18.14■□□□□ 0.49
PUDP-206ENST00000540122 HMMRO75330 724 aa18.14■□□□□ 0.49
PUDP-206ENST00000540122 EIF3JO75822 258 aaKnown RBP18.14■□□□□ 0.49
PUDP-206ENST00000540122 ZFYP08048 801 aaPredicted RBP18.14■□□□□ 0.49
PUDP-206ENST00000540122 RBM10P98175 930 aaKnown RBP18.14■□□□□ 0.49
PUDP-206ENST00000540122 CTDSPL2Q05D32 466 aa18.14■□□□□ 0.49
PUDP-206ENST00000540122 NAALADL2Q58DX5 795 aa18.14■□□□□ 0.49
PUDP-206ENST00000540122 MYSM1Q5VVJ2 828 aa18.14■□□□□ 0.49
PUDP-206ENST00000540122 KREMEN2Q8NCW0 462 aa18.14■□□□□ 0.49
PUDP-206ENST00000540122 POF1BQ8WVV4 589 aa18.14■□□□□ 0.49
PUDP-206ENST00000540122 SPATA33Q96N06 139 aa18.14■□□□□ 0.49
PUDP-206ENST00000540122 RMDN3Q96TC7 470 aa18.14■□□□□ 0.49
PUDP-206ENST00000540122 TMEM47Q9BQJ4 181 aa18.14■□□□□ 0.49
PUDP-206ENST00000540122 RANBP6O60518 1105 aaKnown RBP18.13■□□□□ 0.49
PUDP-206ENST00000540122 DGKIO75912 1065 aa18.13■□□□□ 0.49
PUDP-206ENST00000540122 PDHBP11177 359 aa18.13■□□□□ 0.49
PUDP-206ENST00000540122 TOP1P11387 765 aaKnown RBP18.13■□□□□ 0.49
PUDP-206ENST00000540122 FAM26DQ5JW98 314 aa18.13■□□□□ 0.49
PUDP-206ENST00000540122 KLHL23Q8NBE8 558 aa18.13■□□□□ 0.49
PUDP-206ENST00000540122 VN1R2Q8NFZ6 395 aa18.13■□□□□ 0.49
PUDP-206ENST00000540122 ATP8B4Q8TF62 1192 aa18.13■□□□□ 0.49
PUDP-206ENST00000540122 TLE6Q9H808 572 aa18.13■□□□□ 0.49
PUDP-206ENST00000540122 EPG5Q9HCE0 2579 aa18.12■□□□□ 0.49
PUDP-206ENST00000540122 EIF2AK2P19525 551 aaKnown RBP18.12■□□□□ 0.49
PUDP-206ENST00000540122 SP100P23497 879 aaPredicted RBP18.12■□□□□ 0.49
PUDP-206ENST00000540122 ZNF543Q08ER8 600 aa18.12■□□□□ 0.49
PUDP-206ENST00000540122 CELF3Q5SZQ8 465 aaKnown RBP18.12■□□□□ 0.49
PUDP-206ENST00000540122 ARHGEF16Q5VV41 709 aa18.12■□□□□ 0.49
PUDP-206ENST00000540122 ASTLQ6HA08 431 aaPredicted RBP18.12■□□□□ 0.49
PUDP-206ENST00000540122 UBALD2Q8IYN6 164 aa18.12■□□□□ 0.49
PUDP-206ENST00000540122 CNTNAP3BQ96NU0 1288 aa18.12■□□□□ 0.49
PUDP-206ENST00000540122 SEC62Q99442 399 aaKnown RBP18.12■□□□□ 0.49
PUDP-206ENST00000540122 CNTNAP3Q9BZ76 1288 aa18.12■□□□□ 0.49
PUDP-206ENST00000540122 MAF1Q9H063 256 aa18.12■□□□□ 0.49
PUDP-206ENST00000540122 RNPEPQ9H4A4 650 aa18.12■□□□□ 0.49
PUDP-206ENST00000540122 ECHDC1Q9NTX5 307 aa18.12■□□□□ 0.49
PUDP-206ENST00000540122 KMT2BQ9UMN6 2715 aaPredicted RBP18.11■□□□□ 0.49
PUDP-206ENST00000540122 H3BRB1 525 aa18.11■□□□□ 0.49
PUDP-206ENST00000540122 ENPP3O14638 875 aa18.11■□□□□ 0.49
PUDP-206ENST00000540122 PER2O15055 1255 aa18.11■□□□□ 0.49
PUDP-206ENST00000540122 BRD1O95696 1058 aa18.11■□□□□ 0.49
PUDP-206ENST00000540122 GHRP10912 638 aa18.11■□□□□ 0.49
PUDP-206ENST00000540122 MTMR3Q13615 1198 aa18.11■□□□□ 0.49
PUDP-206ENST00000540122 NEK1Q96PY6 1258 aa18.11■□□□□ 0.49
PUDP-206ENST00000540122 TUT1Q9H6E5 874 aaKnown RBP18.11■□□□□ 0.49
PUDP-206ENST00000540122 NCOR2Q9Y618 2525 aa18.1■□□□□ 0.49
PUDP-206ENST00000540122 GGPS1O95749 300 aa18.1■□□□□ 0.49
PUDP-206ENST00000540122 NR3C2P08235 984 aa18.1■□□□□ 0.49
PUDP-206ENST00000540122 CMTR2Q8IYT2 770 aaKnown RBP18.1■□□□□ 0.49
PUDP-206ENST00000540122 PANK1Q8TE04 598 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms