RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 SAMD15Q9P1V8 674 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 ZNRF3Q9ULT6 936 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 ANKRD31Q8N7Z5 1873 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 RPN1P04843 607 aaKnown RBP10.99□□□□□ -0.65
TRAF1-202ENST00000540010 CALCOCO2Q13137 446 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 CCDC6Q16204 474 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 SHROOM1Q2M3G4 852 aaPredicted RBP10.99□□□□□ -0.65
TRAF1-202ENST00000540010 WDR78Q5VTH9 848 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 MIGA2Q7L4E1 593 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 NYAP2Q9P242 653 aa10.99□□□□□ -0.65
TRAF1-202ENST00000540010 MTRF1LQ9UGC7 380 aaKnown RBP10.99□□□□□ -0.65
TRAF1-202ENST00000540010 CCDC151A5D8V7 595 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 B4DLN1 442 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 H7C1D1 291 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 GTPBP6O43824 516 aaPredicted RBP10.98□□□□□ -0.65
TRAF1-202ENST00000540010 NAA25Q14CX7 972 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 RPS6KA1Q15418 735 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 NCAPH2Q6IBW4 605 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 ADAT2Q7Z6V5 191 aaKnown RBP10.98□□□□□ -0.65
TRAF1-202ENST00000540010 RDH13Q8NBN7 331 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 DCAF4Q8WV16 495 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 DISC1Q9NRI5 854 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 GJA3Q9Y6H8 435 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 PAK2Q13177 524 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 CDC37Q16543 378 aaPredicted RBP10.98□□□□□ -0.65
TRAF1-202ENST00000540010 CEP85LQ5SZL2 805 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 ELOA2Q8IYF1 753 aaPredicted RBP10.98□□□□□ -0.65
TRAF1-202ENST00000540010 HOMER2Q9NSB8 354 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 ZNF70Q9UC06 446 aaPredicted RBP10.98□□□□□ -0.65
TRAF1-202ENST00000540010 SPDYE2BA6NHP3 402 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 SPDYE6P0CI01 402 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 RPL13P26373 211 aaKnown RBP10.98□□□□□ -0.65
TRAF1-202ENST00000540010 MDM2Q00987 491 aaPredicted RBP10.98□□□□□ -0.65
TRAF1-202ENST00000540010 SP4Q02446 784 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 ASIC2Q16515 512 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 QRICH1Q2TAL8 776 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 TRIM58Q8NG06 486 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 CCDC77Q9BR77 488 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 IKBKGQ9Y6K9 419 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 CAPN7Q9Y6W3 813 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 PHLPP2Q6ZVD8 1323 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 MYH1P12882 1939 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 SPOPO43791 374 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 BMP3P12645 472 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 ERCC5P28715 1186 aaPredicted RBP10.98□□□□□ -0.65
TRAF1-202ENST00000540010 PRPHP41219 470 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 ZBTB16Q05516 673 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 CUL4BQ13620 913 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 CIAPIN1Q6FI81 312 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 GOLGA5Q8TBA6 731 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 PLIN4Q96Q06 1357 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 PSMD1Q99460 953 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 TUBGCP2Q9BSJ2 902 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 DNAJC18Q9H819 358 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 PCDHB13Q9Y5F0 798 aa10.98□□□□□ -0.65
TRAF1-202ENST00000540010 IGKV6D-41A0A0C4DH26 115 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 KCNK3O14649 394 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 ABCB4P21439 1286 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 PPP1R2P41236 205 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 SH3BP5LQ7L8J4 393 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 PEX26Q7Z412 305 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 POTEDQ86YR6 584 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 KSR1Q8IVT5 923 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 UHMK1Q8TAS1 419 aaKnown RBP10.97□□□□□ -0.65
TRAF1-202ENST00000540010 ENOX1Q8TC92 643 aaKnown RBP10.97□□□□□ -0.65
TRAF1-202ENST00000540010 IRX2Q9BZI1 471 aaPredicted RBP10.97□□□□□ -0.65
TRAF1-202ENST00000540010 GLT8D2Q9H1C3 349 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 ESYT2A0FGR8 921 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 TNFAIP3P21580 790 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 ACTN2P35609 894 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 SFMBT2Q5VUG0 894 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 FBXO11Q86XK2 927 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 TCHPQ9BT92 498 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 ABCB6Q9NP58 842 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 ADAM21Q9UKJ8 722 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 RRP15Q9Y3B9 282 aaKnown RBP10.97□□□□□ -0.65
TRAF1-202ENST00000540010 USP17L15C9J2P7 530 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 USP17L13C9JLJ4 530 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 USP17L11C9JVI0 530 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 USP17L18D6R9N7 530 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 USP17L22D6RA61 530 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 USP17L17D6RBQ6 530 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 USP17L19D6RCP7 530 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 USP17L20D6RJB6 530 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 USP17L24Q0WX57 530 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 NCAPHQ15003 741 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 IL17AQ16552 155 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 USP17L6PQ6QN14 398 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 TOGARAM2Q6ZUX3 1019 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 AK8Q96MA6 479 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 AMNQ9BXJ7 453 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 CAPS2Q9BXY5 557 aa10.97□□□□□ -0.65
TRAF1-202ENST00000540010 HERC5Q9UII4 1024 aaKnown RBP10.97□□□□□ -0.65
TRAF1-202ENST00000540010 TDP2O95551 362 aa10.96□□□□□ -0.65
TRAF1-202ENST00000540010 NDUFB10O96000 172 aa10.96□□□□□ -0.65
TRAF1-202ENST00000540010 GUCY2DQ02846 1103 aa10.96□□□□□ -0.65
TRAF1-202ENST00000540010 FMR1Q06787 632 aaKnown RBP eCLIP10.96□□□□□ -0.65
TRAF1-202ENST00000540010 EHHADHQ08426 723 aa10.96□□□□□ -0.65
TRAF1-202ENST00000540010 PPP1R18Q6NYC8 613 aa10.96□□□□□ -0.65
TRAF1-202ENST00000540010 LRRC45Q96CN5 670 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms