RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 ZSCAN10Q96SZ4 725 aaPredicted RBP17.32■□□□□ 0.36
USB1-203ENST00000539737 CNNM2Q9H8M5 875 aa17.32■□□□□ 0.36
USB1-203ENST00000539737 SENP2Q9HC62 589 aa17.32■□□□□ 0.36
USB1-203ENST00000539737 ANO2Q9NQ90 1003 aa17.32■□□□□ 0.36
USB1-203ENST00000539737 ZSWIM5Q9P217 1185 aa17.32■□□□□ 0.36
USB1-203ENST00000539737 TRIOO75962 3097 aa17.32■□□□□ 0.36
USB1-203ENST00000539737 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.31■□□□□ 0.36
USB1-203ENST00000539737 RSPH10B2B2RC85 870 aa17.31■□□□□ 0.36
USB1-203ENST00000539737 RSPH10BP0C881 870 aa17.31■□□□□ 0.36
USB1-203ENST00000539737 HSD17B4P51659 736 aa17.31■□□□□ 0.36
USB1-203ENST00000539737 LAMC2Q13753 1193 aa17.31■□□□□ 0.36
USB1-203ENST00000539737 CELF3Q5SZQ8 465 aaKnown RBP17.31■□□□□ 0.36
USB1-203ENST00000539737 CYB5R4Q7L1T6 521 aa17.31■□□□□ 0.36
USB1-203ENST00000539737 SERINC5Q86VE9 423 aa17.31■□□□□ 0.36
USB1-203ENST00000539737 FCHSD1Q86WN1 690 aa17.31■□□□□ 0.36
USB1-203ENST00000539737 DGKHQ86XP1 1220 aa17.31■□□□□ 0.36
USB1-203ENST00000539737 PIBF1Q8WXW3 757 aa17.31■□□□□ 0.36
USB1-203ENST00000539737 MAP4K1Q92918 833 aa17.31■□□□□ 0.36
USB1-203ENST00000539737 EMID1Q96A84 441 aaPredicted RBP17.31■□□□□ 0.36
USB1-203ENST00000539737 KRT23Q9C075 422 aa17.31■□□□□ 0.36
USB1-203ENST00000539737 LMCD1Q9NZU5 365 aa17.31■□□□□ 0.36
USB1-203ENST00000539737 MRPL11Q9Y3B7 192 aaKnown RBP17.31■□□□□ 0.36
USB1-203ENST00000539737 GRXCR2A6NFK2 248 aa17.3■□□□□ 0.36
USB1-203ENST00000539737 AMHP03971 560 aa17.3■□□□□ 0.36
USB1-203ENST00000539737 SMIM10L2AP0DMW4 78 aa17.3■□□□□ 0.36
USB1-203ENST00000539737 SMIM10L2BP0DMW5 78 aa17.3■□□□□ 0.36
USB1-203ENST00000539737 HTRA4P83105 476 aaPredicted RBP17.3■□□□□ 0.36
USB1-203ENST00000539737 SP4Q02446 784 aa17.3■□□□□ 0.36
USB1-203ENST00000539737 PGM5Q15124 567 aa17.3■□□□□ 0.36
USB1-203ENST00000539737 ASPRV1Q53RT3 343 aa17.3■□□□□ 0.36
USB1-203ENST00000539737 PLEKHG4Q58EX7 1191 aa17.3■□□□□ 0.36
USB1-203ENST00000539737 MCF2L2Q86YR7 1114 aa17.3■□□□□ 0.36
USB1-203ENST00000539737 ATP6V0A1Q93050 837 aa17.3■□□□□ 0.36
USB1-203ENST00000539737 KATNAL1Q9BW62 490 aa17.3■□□□□ 0.36
USB1-203ENST00000539737 LSG1Q9H089 658 aaKnown RBP17.3■□□□□ 0.36
USB1-203ENST00000539737 RBM8AQ9Y5S9 174 aaKnown RBP17.3■□□□□ 0.36
USB1-203ENST00000539737 LGALS2P05162 132 aa17.29■□□□□ 0.36
USB1-203ENST00000539737 HOXD8P13378 290 aaPredicted RBP17.29■□□□□ 0.36
USB1-203ENST00000539737 GTF2F1P35269 517 aaKnown RBP eCLIP17.29■□□□□ 0.36
USB1-203ENST00000539737 DLX2Q07687 328 aaPredicted RBP17.29■□□□□ 0.36
USB1-203ENST00000539737 TRDNQ13061 729 aa17.29■□□□□ 0.36
USB1-203ENST00000539737 GPM6BQ13491 265 aa17.29■□□□□ 0.36
USB1-203ENST00000539737 SP7Q8TDD2 431 aaPredicted RBP17.29■□□□□ 0.36
USB1-203ENST00000539737 ZBTB10Q96DT7 871 aa17.29■□□□□ 0.36
USB1-203ENST00000539737 MRPL38Q96DV4 380 aaKnown RBP17.29■□□□□ 0.36
USB1-203ENST00000539737 YME1L1Q96TA2 773 aa17.29■□□□□ 0.36
USB1-203ENST00000539737 UBAC1Q9BSL1 405 aa17.29■□□□□ 0.36
USB1-203ENST00000539737 SETD4Q9NVD3 440 aa17.29■□□□□ 0.36
USB1-203ENST00000539737 INSL6Q9Y581 213 aa17.29■□□□□ 0.36
USB1-203ENST00000539737 C17orf102A2RUQ5 167 aa17.28■□□□□ 0.36
USB1-203ENST00000539737 CYP21A2P08686 494 aa17.28■□□□□ 0.36
USB1-203ENST00000539737 SEMA3FQ13275 785 aa17.28■□□□□ 0.36
USB1-203ENST00000539737 UTP14CQ5TAP6 766 aaKnown RBP17.28■□□□□ 0.36
USB1-203ENST00000539737 BANK1Q8NDB2 785 aa17.28■□□□□ 0.36
USB1-203ENST00000539737 NEK9Q8TD19 979 aa17.28■□□□□ 0.36
USB1-203ENST00000539737 PIGSQ96S52 555 aa17.28■□□□□ 0.36
USB1-203ENST00000539737 RNPEPQ9H4A4 650 aa17.28■□□□□ 0.36
USB1-203ENST00000539737 RTEL1Q9NZ71 1219 aa17.28■□□□□ 0.36
USB1-203ENST00000539737 MAD2L2Q9UI95 211 aa17.28■□□□□ 0.36
USB1-203ENST00000539737 TAF6LQ9Y6J9 622 aa17.28■□□□□ 0.36
USB1-203ENST00000539737 KLRF2D3W0D1 207 aa17.27■□□□□ 0.36
USB1-203ENST00000539737 VSIG10LQ86VR7 867 aa17.27■□□□□ 0.36
USB1-203ENST00000539737 TMEM192Q8IY95 271 aa17.27■□□□□ 0.36
USB1-203ENST00000539737 AMNQ9BXJ7 453 aa17.27■□□□□ 0.36
USB1-203ENST00000539737 MLXIPQ9HAP2 919 aa17.27■□□□□ 0.36
USB1-203ENST00000539737 CLDND1Q9NY35 253 aa17.27■□□□□ 0.36
USB1-203ENST00000539737 PCDHA1Q9Y5I3 950 aa17.27■□□□□ 0.36
USB1-203ENST00000539737 PRR33A8MZF0 331 aa17.26■□□□□ 0.35
USB1-203ENST00000539737 H3BRB1 525 aa17.26■□□□□ 0.35
USB1-203ENST00000539737 GRM6O15303 877 aa17.26■□□□□ 0.35
USB1-203ENST00000539737 LINC01565O15544 149 aa17.26■□□□□ 0.35
USB1-203ENST00000539737 PPFIA4O75335 1185 aa17.26■□□□□ 0.35
USB1-203ENST00000539737 LTBRP36941 435 aa17.26■□□□□ 0.35
USB1-203ENST00000539737 MRPS9P82933 396 aaKnown RBP17.26■□□□□ 0.35
USB1-203ENST00000539737 RNF20Q5VTR2 975 aa17.26■□□□□ 0.35
USB1-203ENST00000539737 RUFY4Q6ZNE9 571 aa17.26■□□□□ 0.35
USB1-203ENST00000539737 STOX1Q6ZVD7 989 aa17.26■□□□□ 0.35
USB1-203ENST00000539737 RALYLQ86SE5 291 aaKnown RBP17.26■□□□□ 0.35
USB1-203ENST00000539737 IFIH1Q9BYX4 1025 aaKnown RBP17.26■□□□□ 0.35
USB1-203ENST00000539737 TUT1Q9H6E5 874 aaKnown RBP17.26■□□□□ 0.35
USB1-203ENST00000539737 ZNF318Q5VUA4 2279 aa17.25■□□□□ 0.35
USB1-203ENST00000539737 H3BNC9 293 aa17.25■□□□□ 0.35
USB1-203ENST00000539737 CYTH3O43739 400 aa17.25■□□□□ 0.35
USB1-203ENST00000539737 EFCAB14O75071 495 aa17.25■□□□□ 0.35
USB1-203ENST00000539737 REC8O95072 547 aa17.25■□□□□ 0.35
USB1-203ENST00000539737 PARNO95453 639 aaKnown RBP17.25■□□□□ 0.35
USB1-203ENST00000539737 LINC00271P0C7V0 271 aa17.25■□□□□ 0.35
USB1-203ENST00000539737 CTNNB1P35222 781 aa17.25■□□□□ 0.35
USB1-203ENST00000539737 ZP2Q05996 745 aa17.25■□□□□ 0.35
USB1-203ENST00000539737 SEC23AQ15436 765 aa17.25■□□□□ 0.35
USB1-203ENST00000539737 IFIT1BQ5T764 474 aaKnown RBP17.25■□□□□ 0.35
USB1-203ENST00000539737 CYFIP1Q7L576 1253 aa17.25■□□□□ 0.35
USB1-203ENST00000539737 RPAINQ86UA6 219 aa17.25■□□□□ 0.35
USB1-203ENST00000539737 NCOA7Q8NI08 942 aa17.25■□□□□ 0.35
USB1-203ENST00000539737 SEPT8Q92599 483 aa17.25■□□□□ 0.35
USB1-203ENST00000539737 TOP1MTQ969P6 601 aa17.25■□□□□ 0.35
USB1-203ENST00000539737 MTMR8Q96EF0 704 aa17.25■□□□□ 0.35
USB1-203ENST00000539737 PHOX2BQ99453 314 aa17.25■□□□□ 0.35
USB1-203ENST00000539737 COL4A6Q14031 1691 aa17.25■□□□□ 0.35
USB1-203ENST00000539737 EMSYQ7Z589 1322 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms