RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 RETREG2Q8NC44 543 aa19.27■□□□□ 0.68
DDB1-215ENST00000539712 CAGE1Q8TC20 777 aa19.27■□□□□ 0.68
DDB1-215ENST00000539712 ZNF576Q9H609 170 aa19.27■□□□□ 0.68
DDB1-215ENST00000539712 PCDHA6Q9UN73 950 aa19.27■□□□□ 0.68
DDB1-215ENST00000539712 YBX2Q9Y2T7 364 aaKnown RBP19.27■□□□□ 0.68
DDB1-215ENST00000539712 PCDHA8Q9Y5H6 950 aa19.27■□□□□ 0.68
DDB1-215ENST00000539712 UBIAD1Q9Y5Z9 338 aa19.27■□□□□ 0.68
DDB1-215ENST00000539712 TANC1Q9C0D5 1861 aa19.26■□□□□ 0.67
DDB1-215ENST00000539712 GOLGA8AA7E2F4 631 aa19.26■□□□□ 0.67
DDB1-215ENST00000539712 GOLGA8BA8MQT2 603 aa19.26■□□□□ 0.67
DDB1-215ENST00000539712 H3BRB1 525 aa19.26■□□□□ 0.67
DDB1-215ENST00000539712 STXBP3O00186 592 aa19.26■□□□□ 0.67
DDB1-215ENST00000539712 CKBP12277 381 aa19.26■□□□□ 0.67
DDB1-215ENST00000539712 KCNA2P16389 499 aa19.26■□□□□ 0.67
DDB1-215ENST00000539712 RPS6KB1P23443 525 aa19.26■□□□□ 0.67
DDB1-215ENST00000539712 SLC17A8Q8NDX2 589 aa19.26■□□□□ 0.67
DDB1-215ENST00000539712 AFAP1L1Q8TED9 768 aa19.26■□□□□ 0.67
DDB1-215ENST00000539712 TUT1Q9H6E5 874 aaKnown RBP19.26■□□□□ 0.67
DDB1-215ENST00000539712 RIC8AQ9NPQ8 531 aa19.26■□□□□ 0.67
DDB1-215ENST00000539712 SLC4A7Q9Y6M7 1214 aa19.26■□□□□ 0.67
DDB1-215ENST00000539712 REC8O95072 547 aa19.25■□□□□ 0.67
DDB1-215ENST00000539712 SELPP16109 830 aa19.25■□□□□ 0.67
DDB1-215ENST00000539712 RABGGTBP53611 331 aa19.25■□□□□ 0.67
DDB1-215ENST00000539712 PTK7Q13308 1070 aa19.25■□□□□ 0.67
DDB1-215ENST00000539712 BLOC1S2Q6QNY1 142 aa19.25■□□□□ 0.67
DDB1-215ENST00000539712 BRF1Q92994 677 aa19.25■□□□□ 0.67
DDB1-215ENST00000539712 GPRASP2Q96D09 838 aa19.25■□□□□ 0.67
DDB1-215ENST00000539712 MTIF3Q9H2K0 278 aaKnown RBP19.25■□□□□ 0.67
DDB1-215ENST00000539712 BARHL2Q9NY43 387 aa19.25■□□□□ 0.67
DDB1-215ENST00000539712 CUL9Q8IWT3 2517 aa19.25■□□□□ 0.67
DDB1-215ENST00000539712 NID2Q14112 1375 aa19.24■□□□□ 0.67
DDB1-215ENST00000539712 ADAMTS3O15072 1205 aa19.24■□□□□ 0.67
DDB1-215ENST00000539712 NBNO60934 754 aa19.24■□□□□ 0.67
DDB1-215ENST00000539712 NAPAP54920 295 aa19.24■□□□□ 0.67
DDB1-215ENST00000539712 EVCP57679 992 aa19.24■□□□□ 0.67
DDB1-215ENST00000539712 MBTPS1Q14703 1052 aa19.24■□□□□ 0.67
DDB1-215ENST00000539712 TCTN1Q2MV58 587 aa19.24■□□□□ 0.67
DDB1-215ENST00000539712 PPP1R18Q6NYC8 613 aa19.24■□□□□ 0.67
DDB1-215ENST00000539712 LRRC8DQ7L1W4 858 aa19.24■□□□□ 0.67
DDB1-215ENST00000539712 NLRX1Q86UT6 975 aa19.24■□□□□ 0.67
DDB1-215ENST00000539712 SERINC5Q86VE9 423 aa19.24■□□□□ 0.67
DDB1-215ENST00000539712 TRIM50Q86XT4 487 aa19.24■□□□□ 0.67
DDB1-215ENST00000539712 CYP2W1Q8TAV3 490 aa19.24■□□□□ 0.67
DDB1-215ENST00000539712 USP26Q9BXU7 913 aa19.24■□□□□ 0.67
DDB1-215ENST00000539712 JADE2Q9NQC1 790 aa19.24■□□□□ 0.67
DDB1-215ENST00000539712 MYO9BQ13459 2157 aa19.24■□□□□ 0.67
DDB1-215ENST00000539712 GBF1Q92538 1859 aa19.24■□□□□ 0.67
DDB1-215ENST00000539712 SPDYE3A6NKU9 549 aa19.23■□□□□ 0.67
DDB1-215ENST00000539712 NOP56O00567 594 aaKnown RBP19.23■□□□□ 0.67
DDB1-215ENST00000539712 CXCL10P02778 98 aa19.23■□□□□ 0.67
DDB1-215ENST00000539712 SMIM10L2AP0DMW4 78 aa19.23■□□□□ 0.67
DDB1-215ENST00000539712 SMIM10L2BP0DMW5 78 aa19.23■□□□□ 0.67
DDB1-215ENST00000539712 MYOGP15173 224 aa19.23■□□□□ 0.67
DDB1-215ENST00000539712 CLK2P49760 499 aaKnown RBP19.23■□□□□ 0.67
DDB1-215ENST00000539712 RAB30Q15771 203 aa19.23■□□□□ 0.67
DDB1-215ENST00000539712 PKN1Q16512 942 aa19.23■□□□□ 0.67
DDB1-215ENST00000539712 TEX2Q8IWB9 1127 aa19.23■□□□□ 0.67
DDB1-215ENST00000539712 CCDC155Q8N6L0 562 aa19.23■□□□□ 0.67
DDB1-215ENST00000539712 NKX2-4Q9H2Z4 354 aa19.23■□□□□ 0.67
DDB1-215ENST00000539712 RNPEPQ9H4A4 650 aa19.23■□□□□ 0.67
DDB1-215ENST00000539712 GSTTP1A0A1W2PQM5 241 aa19.22■□□□□ 0.67
DDB1-215ENST00000539712 SMCO2A6NFE2 343 aa19.22■□□□□ 0.67
DDB1-215ENST00000539712 ZBBXA8MT70 800 aa19.22■□□□□ 0.67
DDB1-215ENST00000539712 EPB41L2O43491 1005 aaKnown RBP19.22■□□□□ 0.67
DDB1-215ENST00000539712 NEFLP07196 543 aa19.22■□□□□ 0.67
DDB1-215ENST00000539712 ATP2A2P16615 1042 aaKnown RBP19.22■□□□□ 0.67
DDB1-215ENST00000539712 METAP2P50579 478 aaKnown RBP eCLIP19.22■□□□□ 0.673e-7■□□□□ 9.8
DDB1-215ENST00000539712 ADAM17P78536 824 aa19.22■□□□□ 0.67
DDB1-215ENST00000539712 NTRK3Q16288 839 aa19.22■□□□□ 0.67
DDB1-215ENST00000539712 PFKFB3Q16875 520 aaPredicted RBP19.22■□□□□ 0.67
DDB1-215ENST00000539712 ZNF618Q5T7W0 954 aa19.22■□□□□ 0.67
DDB1-215ENST00000539712 PGBD1Q96JS3 809 aa19.22■□□□□ 0.67
DDB1-215ENST00000539712 FTOQ9C0B1 505 aaKnown RBP eCLIP19.22■□□□□ 0.67
DDB1-215ENST00000539712 ZSWIM6Q9HCJ5 1215 aa19.22■□□□□ 0.67
DDB1-215ENST00000539712 TMEM260Q9NX78 707 aa19.22■□□□□ 0.67
DDB1-215ENST00000539712 MSRAQ9UJ68 235 aa19.22■□□□□ 0.67
DDB1-215ENST00000539712 hCG_1984214I3L0E3 225 aa19.21■□□□□ 0.67
DDB1-215ENST00000539712 TREHO43280 583 aa19.21■□□□□ 0.67
DDB1-215ENST00000539712 ADCY7P51828 1080 aa19.21■□□□□ 0.67
DDB1-215ENST00000539712 FGD1P98174 961 aa19.21■□□□□ 0.67
DDB1-215ENST00000539712 SP4Q02446 784 aa19.21■□□□□ 0.67
DDB1-215ENST00000539712 MTMR1Q13613 665 aa19.21■□□□□ 0.67
DDB1-215ENST00000539712 ZNF713Q8N859 430 aaPredicted RBP19.21■□□□□ 0.67
DDB1-215ENST00000539712 GIMAP8Q8ND71 665 aaPredicted RBP19.21■□□□□ 0.67
DDB1-215ENST00000539712 MAFAQ8NHW3 353 aaPredicted RBP19.21■□□□□ 0.67
DDB1-215ENST00000539712 CDHR1Q96JP9 859 aa19.21■□□□□ 0.67
DDB1-215ENST00000539712 MXRA8Q9BRK3 442 aa19.21■□□□□ 0.67
DDB1-215ENST00000539712 NAP1L2Q9ULW6 460 aaPredicted RBP19.21■□□□□ 0.67
DDB1-215ENST00000539712 PCDHA11Q9Y5I1 949 aa19.21■□□□□ 0.67
DDB1-215ENST00000539712 SPTBN5Q9NRC6 3674 aaKnown RBP19.21■□□□□ 0.67
DDB1-215ENST00000539712 C17orf102A2RUQ5 167 aa19.2■□□□□ 0.66
DDB1-215ENST00000539712 MAFGO15525 162 aa19.2■□□□□ 0.66
DDB1-215ENST00000539712 FOSP01100 380 aaPredicted RBP19.2■□□□□ 0.66
DDB1-215ENST00000539712 ACTN1P12814 892 aa19.2■□□□□ 0.66
DDB1-215ENST00000539712 FOSL2P15408 326 aa19.2■□□□□ 0.66
DDB1-215ENST00000539712 PSMA5P28066 241 aa19.2■□□□□ 0.66
DDB1-215ENST00000539712 PDIA3P30101 505 aaKnown RBP19.2■□□□□ 0.66
DDB1-215ENST00000539712 TOB2Q14106 344 aaPredicted RBP19.2■□□□□ 0.66
DDB1-215ENST00000539712 UTP14CQ5TAP6 766 aaKnown RBP19.2■□□□□ 0.66
DDB1-215ENST00000539712 CRYGNQ8WXF5 182 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms