RNA–Protein interactions for RNA: ENST00000539382.5

CTCFL-212, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,262 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-212ENST00000539382 KCNB1Q14721 858 aa12.44□□□□□ -0.42
CTCFL-212ENST00000539382 TKFCQ3LXA3 575 aa12.44□□□□□ -0.42
CTCFL-212ENST00000539382 GPAT2Q6NUI2 795 aa12.44□□□□□ -0.42
CTCFL-212ENST00000539382 B3GNT9Q6UX72 402 aa12.44□□□□□ -0.42
CTCFL-212ENST00000539382 PROCA1Q8NCQ7 364 aaPredicted RBP12.44□□□□□ -0.42
CTCFL-212ENST00000539382 ZNF577Q9BSK1 485 aa12.44□□□□□ -0.42
CTCFL-212ENST00000539382 EHMT1Q9H9B1 1298 aa12.44□□□□□ -0.42
CTCFL-212ENST00000539382 CYP39A1Q9NYL5 469 aa12.44□□□□□ -0.42
CTCFL-212ENST00000539382 RBBP6Q7Z6E9 1792 aaKnown RBP12.43□□□□□ -0.42
CTCFL-212ENST00000539382 ASTN1O14525 1302 aa12.43□□□□□ -0.42
CTCFL-212ENST00000539382 DHX15O43143 795 aaKnown RBP12.43□□□□□ -0.42
CTCFL-212ENST00000539382 MYCLP12524 364 aaPredicted RBP12.43□□□□□ -0.42
CTCFL-212ENST00000539382 ZNF18P17022 549 aa12.43□□□□□ -0.42
CTCFL-212ENST00000539382 RPA1P27694 616 aa12.43□□□□□ -0.42
CTCFL-212ENST00000539382 ERCC5P28715 1186 aaPredicted RBP12.43□□□□□ -0.42
CTCFL-212ENST00000539382 PMS1P54277 932 aaKnown RBP12.43□□□□□ -0.42
CTCFL-212ENST00000539382 ASIC1P78348 528 aa12.43□□□□□ -0.42
CTCFL-212ENST00000539382 STK4Q13043 487 aa12.43□□□□□ -0.42
CTCFL-212ENST00000539382 ITGB3BPQ13352 177 aaPredicted RBP12.43□□□□□ -0.42
CTCFL-212ENST00000539382 PPP2R5CQ13362 524 aa12.43□□□□□ -0.42
CTCFL-212ENST00000539382 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.43□□□□□ -0.42
CTCFL-212ENST00000539382 DDX12PQ92771 950 aa12.43□□□□□ -0.42
CTCFL-212ENST00000539382 HSD17B14Q9BPX1 270 aa12.43□□□□□ -0.42
CTCFL-212ENST00000539382 EIF2AK1Q9BQI3 630 aaKnown RBP12.43□□□□□ -0.42
CTCFL-212ENST00000539382 UNC45AQ9H3U1 944 aa12.43□□□□□ -0.42
CTCFL-212ENST00000539382 TXNRD2Q9NNW7 524 aa12.43□□□□□ -0.42
CTCFL-212ENST00000539382 IFNKQ9P0W0 207 aa12.43□□□□□ -0.42
CTCFL-212ENST00000539382 WRAP73Q9P2S5 460 aaPredicted RBP12.43□□□□□ -0.42
CTCFL-212ENST00000539382 CTNND2Q9UQB3 1225 aa12.43□□□□□ -0.42
CTCFL-212ENST00000539382 NPHP3-ACAD11A0A0J9YXS1 232 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 ZBTB39O15060 712 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 OFD1O75665 1012 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 CNMDO75829 334 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 FSTL1Q12841 308 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 PTPN21Q16825 1174 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 GIMAP8Q8ND71 665 aaPredicted RBP12.42□□□□□ -0.42
CTCFL-212ENST00000539382 DNAJC19Q96DA6 116 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 XPO4Q9C0E2 1151 aaKnown RBP12.42□□□□□ -0.42
CTCFL-212ENST00000539382 NMRK2Q9NPI5 230 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 JADE2Q9NQC1 790 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 DACH1Q9UI36 760 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 PNMA2Q9UL42 364 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 AGTPBP1Q9UPW5 1226 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 KDM3AQ9Y4C1 1321 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 DDX39AO00148 427 aaKnown RBP12.42□□□□□ -0.42
CTCFL-212ENST00000539382 GAS7O60861 476 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 ATP9AO75110 1047 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 SLITRK3O94933 977 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 PLA2G4BP0C869 781 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 SLC12A3P55017 1021 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 HERVK_113P62684 666 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 FANCCQ00597 558 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 PDE4DQ08499 809 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 CTTNQ14247 550 aaKnown RBP12.42□□□□□ -0.42
CTCFL-212ENST00000539382 CCDC144BQ3MJ40 725 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 ARSHQ5FYA8 562 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 ARHGEF16Q5VV41 709 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 ADSSL1Q8N142 457 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 SAMD3Q8N6K7 520 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 KIAA0895Q8NCT3 520 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 GLIS3Q8NEA6 775 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 SLC10A4Q96EP9 437 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 NT5C3AQ9H0P0 336 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 ACAD9Q9H845 621 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 RMND1Q9NWS8 449 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 STK24Q9Y6E0 443 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.42□□□□□ -0.429e-7■■□□□ 11.8
CTCFL-212ENST00000539382 A0A0G2JMZ2 1700 aa12.42□□□□□ -0.42
CTCFL-212ENST00000539382 TRIM49BA6NDI0 452 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 RGS20O76081 388 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 SSBP05455 408 aaKnown RBP eCLIP12.41□□□□□ -0.42
CTCFL-212ENST00000539382 BCRP11274 1271 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 SETQ01105 290 aaPredicted RBP12.41□□□□□ -0.42
CTCFL-212ENST00000539382 AMPD3Q01432 767 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 CNTN2Q02246 1040 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 CACNB1Q02641 598 aaPredicted RBP12.41□□□□□ -0.42
CTCFL-212ENST00000539382 RAD51AP2Q09MP3 1159 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 MKRN3Q13064 507 aaKnown RBP12.41□□□□□ -0.42
CTCFL-212ENST00000539382 Q3C1V9 767 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 ZNF526Q8TF50 670 aaPredicted RBP12.41□□□□□ -0.42
CTCFL-212ENST00000539382 MRFAP1L1Q96HT8 127 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 PAGR1Q9BTK6 254 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 BCAS3Q9H6U6 928 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 AGO4Q9HCK5 861 aaKnown RBP12.41□□□□□ -0.42
CTCFL-212ENST00000539382 INTS13Q9NVM9 706 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 LCTP09848 1927 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 SYNRGQ9UMZ2 1314 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 NR3C2P08235 984 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 CYP11B2P19099 503 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 IRX3P78415 501 aaPredicted RBP12.41□□□□□ -0.42
CTCFL-212ENST00000539382 EHHADHQ08426 723 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 SEMA3FQ13275 785 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 PABPC4Q13310 644 aaKnown RBP eCLIP12.41□□□□□ -0.42
CTCFL-212ENST00000539382 MTMR1Q13613 665 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 SPATA1Q5VX52 437 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 HAUS3Q68CZ6 603 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 VSIG10LQ86VR7 867 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 PIGOQ8TEQ8 1089 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 NELFBQ8WX92 580 aa12.41□□□□□ -0.42
CTCFL-212ENST00000539382 DYDC2Q96IM9 177 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms