RNA–Protein interactions for RNA: ENST00000539303.5

SNHG1-210, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 240 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-210ENST00000539303 ASIC4Q96FT7 647 aa4.29□□□□□ -1.72
SNHG1-210ENST00000539303 CEP89Q96ST8 783 aa4.29□□□□□ -1.72
SNHG1-210ENST00000539303 YIPF4Q9BSR8 244 aa4.29□□□□□ -1.72
SNHG1-210ENST00000539303 EPB41L1Q9H4G0 881 aa4.29□□□□□ -1.72
SNHG1-210ENST00000539303 MBNL3Q9NUK0 354 aaKnown RBP4.29□□□□□ -1.72
SNHG1-210ENST00000539303 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.29□□□□□ -1.72
SNHG1-210ENST00000539303 ACSL6Q9UKU0 697 aa4.29□□□□□ -1.72
SNHG1-210ENST00000539303 COA3Q9Y2R0 106 aaPredicted RBP4.29□□□□□ -1.72
SNHG1-210ENST00000539303 HCFC2Q9Y5Z7 792 aa4.29□□□□□ -1.72
SNHG1-210ENST00000539303 EID1Q9Y6B2 187 aa4.29□□□□□ -1.72
SNHG1-210ENST00000539303 TNKSO95271 1327 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 A0A1W2PQ27 194 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 A0A1W2PQ64 194 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 A0A1W2PQC6 194 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 A0A1W2PQD8 194 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 SLC12A8A0AV02 714 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 KIAA1324LA8MWY0 1029 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-210ENST00000539303 GSTA4O15217 222 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 ZEB2O60315 1214 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 DGKIO75912 1065 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 APPP05067 770 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 PTX3P26022 381 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-210ENST00000539303 IARSP41252 1262 aaKnown RBP4.28□□□□□ -1.72
SNHG1-210ENST00000539303 MCL1Q07820 350 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 SPIRE1Q08AE8 756 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 PLCL1Q15111 1095 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 ABCB5Q2M3G0 1257 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 BROXQ5VW32 411 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 IQSEC1Q6DN90 963 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 GALNT18Q6P9A2 607 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 HHIPL2Q6UWX4 724 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 NLRX1Q86UT6 975 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 CBARPQ8N350 705 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-210ENST00000539303 PDZD8Q8NEN9 1154 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 SHISA4Q96DD7 197 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 ELF4Q99607 663 aaPredicted RBP4.28□□□□□ -1.72
SNHG1-210ENST00000539303 BOCQ9BWV1 1114 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 CHMP4AQ9BY43 222 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 PDLIM7Q9NR12 457 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 ADGRE2Q9UHX3 823 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 GPR160Q9UJ42 338 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 SRPK3Q9UPE1 567 aa4.28□□□□□ -1.72
SNHG1-210ENST00000539303 SHTN1A0MZ66 631 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 FAM90A27PA6NNH2 459 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 SGSM2O43147 1006 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 MT-CO1P00395 513 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 HPXP02790 462 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 GLI4P10075 376 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 NEK2P51955 445 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 KIF11P52732 1056 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 CORO7P57737 925 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 ERVK-21P61565 698 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 CYP4F8P98187 520 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 GRIN1Q05586 938 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 MROH9Q5TGP6 573 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 STEAP3Q658P3 488 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 BICRALQ6AI39 1079 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 ESRP1Q6NXG1 681 aaKnown RBP4.27□□□□□ -1.73
SNHG1-210ENST00000539303 SLC23A3Q6PIS1 610 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 RIOX2Q8IUF8 465 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 TP53INP2Q8IXH6 220 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 KIAA1958Q8N8K9 716 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 UHMK1Q8TAS1 419 aaKnown RBP4.27□□□□□ -1.73
SNHG1-210ENST00000539303 SLC5A5Q92911 643 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 BCAS3Q9H6U6 928 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 SLC6A20Q9NP91 592 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 DSEQ9UL01 958 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 PLA2G2DQ9UNK4 145 aa4.27□□□□□ -1.73
SNHG1-210ENST00000539303 ANGEL1Q9UNK9 670 aaKnown RBP4.27□□□□□ -1.73
SNHG1-210ENST00000539303 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-210ENST00000539303 ZC3H12DA2A288 527 aaKnown RBP4.26□□□□□ -1.73
SNHG1-210ENST00000539303 FITM1A5D6W6 292 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 RASSF10A6NK89 507 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 H7C1D1 291 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 DBHP09172 617 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 TMEM253P0C7T8 217 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 RAB27AP51159 221 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 CHRNEQ04844 493 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 TMEM132BQ14DG7 1078 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 DDB1Q16531 1140 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 ARHGAP44Q17R89 818 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 ZNF792Q3KQV3 632 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 EMC4Q5J8M3 183 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 SYDE2Q5VT97 1194 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 KCTD1Q719H9 257 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 OXR1Q8N573 874 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 EFHBQ8N7U6 833 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 ARRDC4Q8NCT1 418 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 CLEC4DQ8WXI8 215 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 RNF32Q9H0A6 362 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 PUS7LQ9H0K6 701 aaKnown RBP4.26□□□□□ -1.73
SNHG1-210ENST00000539303 TNFRSF12AQ9NP84 129 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 TOPORSQ9NS56 1045 aaPredicted RBP4.26□□□□□ -1.73
SNHG1-210ENST00000539303 TOMM22Q9NS69 142 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 C14orf119Q9NWQ9 140 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 PALD1Q9ULE6 856 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 CTNND2Q9UQB3 1225 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 B3GALT1Q9Y5Z6 326 aa4.26□□□□□ -1.73
SNHG1-210ENST00000539303 FZD9O00144 591 aa4.25□□□□□ -1.73
SNHG1-210ENST00000539303 ACOT7O00154 380 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms