RNA–Protein interactions for RNA: ENST00000539061.5

C2CD3-213, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2 BASIC

Gene C2CD3, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-213ENST00000539061 CNOT8Q9UFF9 292 aaKnown RBP18.91■□□□□ 0.62
C2CD3-213ENST00000539061 NOVA2Q9UNW9 492 aaKnown RBP18.91■□□□□ 0.62
C2CD3-213ENST00000539061 RREB1Q92766 1687 aa18.91■□□□□ 0.62
C2CD3-213ENST00000539061 CCNT1O60563 726 aaKnown RBP18.91■□□□□ 0.62
C2CD3-213ENST00000539061 DNAJC8O75937 253 aaPredicted RBP18.91■□□□□ 0.62
C2CD3-213ENST00000539061 CYP19A1P11511 503 aaPredicted RBP18.91■□□□□ 0.62
C2CD3-213ENST00000539061 ERCC3P19447 782 aa18.91■□□□□ 0.62
C2CD3-213ENST00000539061 TECP42680 631 aa18.91■□□□□ 0.62
C2CD3-213ENST00000539061 CCDC152Q4G0S7 254 aa18.91■□□□□ 0.62
C2CD3-213ENST00000539061 ANKS1AQ92625 1134 aa18.91■□□□□ 0.62
C2CD3-213ENST00000539061 HVCN1Q96D96 273 aa18.91■□□□□ 0.62
C2CD3-213ENST00000539061 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.91■□□□□ 0.62
C2CD3-213ENST00000539061 BARHL2Q9NY43 387 aa18.91■□□□□ 0.62
C2CD3-213ENST00000539061 SWAP70Q9UH65 585 aa18.91■□□□□ 0.62
C2CD3-213ENST00000539061 ZBTB1Q9Y2K1 713 aa18.91■□□□□ 0.62
C2CD3-213ENST00000539061 ZNF804BA4D1E1 1349 aa18.91■□□□□ 0.62
C2CD3-213ENST00000539061 ANKRD36CQ5JPF3 1778 aa18.91■□□□□ 0.62
C2CD3-213ENST00000539061 A0A1B0GUA9 196 aa18.9■□□□□ 0.62
C2CD3-213ENST00000539061 MGRN1O60291 552 aa18.9■□□□□ 0.62
C2CD3-213ENST00000539061 LETM2Q2VYF4 491 aa18.9■□□□□ 0.62
C2CD3-213ENST00000539061 TMED8Q6PL24 325 aaPredicted RBP18.9■□□□□ 0.62
C2CD3-213ENST00000539061 TEX11Q8IYF3 940 aa18.9■□□□□ 0.62
C2CD3-213ENST00000539061 CCT6BQ92526 530 aa18.9■□□□□ 0.62
C2CD3-213ENST00000539061 FAM212AQ96EL1 285 aa18.9■□□□□ 0.62
C2CD3-213ENST00000539061 MMTAG2Q9BU76 263 aaKnown RBP18.9■□□□□ 0.62
C2CD3-213ENST00000539061 PRDM11Q9NQV5 511 aa18.9■□□□□ 0.62
C2CD3-213ENST00000539061 FBXL5Q9UKA1 691 aa18.9■□□□□ 0.62
C2CD3-213ENST00000539061 E2F5Q15329 346 aa18.9■□□□□ 0.62
C2CD3-213ENST00000539061 DDX42Q86XP3 938 aaKnown RBP eCLIP18.9■□□□□ 0.62
C2CD3-213ENST00000539061 PNMA1Q8ND90 353 aa18.9■□□□□ 0.62
C2CD3-213ENST00000539061 CALR3Q96L12 384 aaKnown RBP18.9■□□□□ 0.62
C2CD3-213ENST00000539061 RIC8AQ9NPQ8 531 aa18.9■□□□□ 0.62
C2CD3-213ENST00000539061 MYMKA6NI61 221 aa18.89■□□□□ 0.62
C2CD3-213ENST00000539061 STXBP3O00186 592 aa18.89■□□□□ 0.62
C2CD3-213ENST00000539061 ATP2C2O75185 946 aa18.89■□□□□ 0.62
C2CD3-213ENST00000539061 NOL4O94818 638 aa18.89■□□□□ 0.62
C2CD3-213ENST00000539061 HOXA7P31268 230 aaPredicted RBP18.89■□□□□ 0.62
C2CD3-213ENST00000539061 GYG1P46976 350 aa18.89■□□□□ 0.62
C2CD3-213ENST00000539061 POLR2FP61218 127 aaKnown RBP18.89■□□□□ 0.62
C2CD3-213ENST00000539061 EP400NLQ6ZTU2 488 aa18.89■□□□□ 0.62
C2CD3-213ENST00000539061 KRT25Q7Z3Z0 450 aa18.89■□□□□ 0.62
C2CD3-213ENST00000539061 ACTRT1Q8TDG2 376 aa18.89■□□□□ 0.62
C2CD3-213ENST00000539061 DCP1AQ9NPI6 582 aaPredicted RBP18.89■□□□□ 0.62
C2CD3-213ENST00000539061 A0A087X0T9 212 aa18.89■□□□□ 0.61
C2CD3-213ENST00000539061 BHMG1C9JSJ3 638 aaPredicted RBP18.89■□□□□ 0.61
C2CD3-213ENST00000539061 CEP104O60308 925 aa18.89■□□□□ 0.61
C2CD3-213ENST00000539061 FAM228BP0C875 321 aa18.89■□□□□ 0.61
C2CD3-213ENST00000539061 CLNS1AP54105 237 aaKnown RBP18.89■□□□□ 0.61
C2CD3-213ENST00000539061 MAGOHP61326 146 aaKnown RBP18.89■□□□□ 0.61
C2CD3-213ENST00000539061 GRM4Q14833 912 aa18.89■□□□□ 0.61
C2CD3-213ENST00000539061 SUSD4Q5VX71 490 aa18.89■□□□□ 0.61
C2CD3-213ENST00000539061 MSL1Q68DK7 614 aa18.89■□□□□ 0.61
C2CD3-213ENST00000539061 DGKHQ86XP1 1220 aa18.89■□□□□ 0.61
C2CD3-213ENST00000539061 PROM2Q8N271 834 aa18.89■□□□□ 0.61
C2CD3-213ENST00000539061 MAGOHBQ96A72 148 aaKnown RBP18.89■□□□□ 0.61
C2CD3-213ENST00000539061 CARD10Q9BWT7 1032 aa18.89■□□□□ 0.61
C2CD3-213ENST00000539061 LSM14BQ9BX40 385 aaKnown RBP18.89■□□□□ 0.61
C2CD3-213ENST00000539061 STK17AQ9UEE5 414 aa18.89■□□□□ 0.61
C2CD3-213ENST00000539061 ADAMTS1Q9UHI8 967 aa18.89■□□□□ 0.61
C2CD3-213ENST00000539061 CICQ96RK0 1608 aaPredicted RBP18.88■□□□□ 0.61
C2CD3-213ENST00000539061 BACH1O14867 736 aa18.88■□□□□ 0.61
C2CD3-213ENST00000539061 SART1O43290 800 aaKnown RBP18.88■□□□□ 0.61
C2CD3-213ENST00000539061 KIF4AO95239 1232 aa18.88■□□□□ 0.61
C2CD3-213ENST00000539061 USP11P51784 963 aa18.88■□□□□ 0.61
C2CD3-213ENST00000539061 KLHL30Q0D2K2 578 aa18.88■□□□□ 0.61
C2CD3-213ENST00000539061 NONOQ15233 471 aaKnown RBP eCLIP18.88■□□□□ 0.61
C2CD3-213ENST00000539061 FOXR2Q6PJQ5 311 aa18.88■□□□□ 0.61
C2CD3-213ENST00000539061 DYMQ7RTS9 669 aa18.88■□□□□ 0.61
C2CD3-213ENST00000539061 PACSIN1Q9BY11 444 aa18.88■□□□□ 0.61
C2CD3-213ENST00000539061 CRNKL1Q9BZJ0 848 aaKnown RBP18.88■□□□□ 0.61
C2CD3-213ENST00000539061 NEUROG2Q9H2A3 272 aa18.88■□□□□ 0.61
C2CD3-213ENST00000539061 CNOT10Q9H9A5 744 aaKnown RBP18.88■□□□□ 0.61
C2CD3-213ENST00000539061 BTNL10A8MVZ5 291 aa18.88■□□□□ 0.61
C2CD3-213ENST00000539061 PHF20L1A8MW92 1017 aa18.88■□□□□ 0.61
C2CD3-213ENST00000539061 DRD4P21917 467 aa18.88■□□□□ 0.61
C2CD3-213ENST00000539061 TLDC1Q6P9B6 456 aa18.88■□□□□ 0.61
C2CD3-213ENST00000539061 BLOC1S4Q9NUP1 217 aa18.88■□□□□ 0.61
C2CD3-213ENST00000539061 COL4A3BPQ9Y5P4 624 aa18.88■□□□□ 0.61
C2CD3-213ENST00000539061 CCDC189A1A4V9 331 aa18.87■□□□□ 0.61
C2CD3-213ENST00000539061 MYCNP04198 464 aaPredicted RBP18.87■□□□□ 0.61
C2CD3-213ENST00000539061 RAPGEF1Q13905 1077 aa18.87■□□□□ 0.61
C2CD3-213ENST00000539061 KRT71Q3SY84 523 aa18.87■□□□□ 0.61
C2CD3-213ENST00000539061 ZNF384Q8TF68 577 aa18.87■□□□□ 0.61
C2CD3-213ENST00000539061 LARP4BQ92615 738 aaKnown RBP18.87■□□□□ 0.61
C2CD3-213ENST00000539061 ATP8A2Q9NTI2 1148 aa18.87■□□□□ 0.61
C2CD3-213ENST00000539061 MAD2L2Q9UI95 211 aa18.87■□□□□ 0.61
C2CD3-213ENST00000539061 CYP2D6P10635 497 aa18.87■□□□□ 0.61
C2CD3-213ENST00000539061 FKBP3Q00688 224 aaKnown RBP18.87■□□□□ 0.61
C2CD3-213ENST00000539061 PSMD2Q13200 908 aa18.87■□□□□ 0.61
C2CD3-213ENST00000539061 GRB10Q13322 594 aa18.87■□□□□ 0.61
C2CD3-213ENST00000539061 IFI16Q16666 785 aaKnown RBP18.87■□□□□ 0.61
C2CD3-213ENST00000539061 NEK8Q86SG6 692 aa18.87■□□□□ 0.61
C2CD3-213ENST00000539061 CHMP6Q96FZ7 201 aa18.87■□□□□ 0.61
C2CD3-213ENST00000539061 ARPP21Q9UBL0 812 aaPredicted RBP18.87■□□□□ 0.61
C2CD3-213ENST00000539061 CACNA1SQ13698 1873 aa18.87■□□□□ 0.61
C2CD3-213ENST00000539061 A0A0G2JS52 829 aa18.87■□□□□ 0.61
C2CD3-213ENST00000539061 CCDC188H7C350 402 aa18.87■□□□□ 0.61
C2CD3-213ENST00000539061 PGRMC1O00264 195 aaKnown RBP18.87■□□□□ 0.61
C2CD3-213ENST00000539061 OPLAHO14841 1288 aa18.87■□□□□ 0.61
C2CD3-213ENST00000539061 ELF3P78545 371 aaPredicted RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms