RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 LONRF3Q496Y0 759 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 DYMQ7RTS9 669 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 TLK2Q86UE8 772 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 ANKS1AQ92625 1134 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 BICD1Q96G01 975 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 MAML3Q96JK9 1138 aa9.83□□□□□ -0.84
GGA3-202ENST00000538886 AKR1A1P14550 325 aa9.82□□□□□ -0.84
GGA3-202ENST00000538886 STAT6P42226 847 aa9.82□□□□□ -0.84
GGA3-202ENST00000538886 CACNB1Q02641 598 aaPredicted RBP9.82□□□□□ -0.84
GGA3-202ENST00000538886 NEDD9Q14511 834 aa9.82□□□□□ -0.84
GGA3-202ENST00000538886 USP28Q96RU2 1077 aa9.82□□□□□ -0.84
GGA3-202ENST00000538886 MCOLN1Q9GZU1 580 aa9.82□□□□□ -0.84
GGA3-202ENST00000538886 TSPYL1Q9H0U9 437 aa9.82□□□□□ -0.84
GGA3-202ENST00000538886 TBC1D7Q9P0N9 293 aa9.82□□□□□ -0.84
GGA3-202ENST00000538886 GABBR1Q9UBS5 961 aa9.82□□□□□ -0.84
GGA3-202ENST00000538886 RSPH14Q9UHP6 348 aa9.82□□□□□ -0.84
GGA3-202ENST00000538886 A0A1B0GVL5 298 aa9.82□□□□□ -0.84
GGA3-202ENST00000538886 ARHGEF35A5YM69 484 aa9.82□□□□□ -0.84
GGA3-202ENST00000538886 BIN1O00499 593 aa9.82□□□□□ -0.84
GGA3-202ENST00000538886 CCND3P30281 292 aaPredicted RBP9.82□□□□□ -0.84
GGA3-202ENST00000538886 HS1BP3Q53T59 392 aa9.82□□□□□ -0.84
GGA3-202ENST00000538886 COL13A1Q5TAT6 717 aaPredicted RBP9.82□□□□□ -0.84
GGA3-202ENST00000538886 FAM212AQ96EL1 285 aa9.82□□□□□ -0.84
GGA3-202ENST00000538886 INTS4Q96HW7 963 aaKnown RBP9.82□□□□□ -0.84
GGA3-202ENST00000538886 JPH1Q9HDC5 661 aaPredicted RBP9.82□□□□□ -0.84
GGA3-202ENST00000538886 CLIC4Q9Y696 253 aa9.82□□□□□ -0.84
GGA3-202ENST00000538886 USO1O60763 962 aaKnown RBP9.81□□□□□ -0.84
GGA3-202ENST00000538886 OR52Z1P0C646 297 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 AP3B2Q13367 1082 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 PGM5Q15124 567 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 NTRK3Q16288 839 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 PKN1Q16512 942 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 KLHL10Q6JEL2 608 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 EP400NLQ6ZTU2 488 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 ARRDC4Q8NCT1 418 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 TRIB2Q92519 343 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 CEP170P1Q96L14 293 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 RGL1Q9NZL6 768 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 COL20A1Q9P218 1284 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 ZNF215Q9UL58 517 aaPredicted RBP9.81□□□□□ -0.84
GGA3-202ENST00000538886 M0QZ92 97 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 GH1P01241 217 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 OAZ1P54368 228 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 NOLC1Q14978 699 aaKnown RBP eCLIP9.81□□□□□ -0.845e-6■□□□□ 9.2
GGA3-202ENST00000538886 RRAGBQ5VZM2 374 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 BRAPQ7Z569 592 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 DISC1Q9NRI5 854 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 KIAA1024Q9UPX6 916 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 MYO5AQ9Y4I1 1855 aaKnown RBP9.81□□□□□ -0.84
GGA3-202ENST00000538886 TRIOBPQ9H2D6 2365 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 KIF28PB7ZC32 967 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 hCG_1984214I3L0E3 225 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 GALNT17Q6IS24 598 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 ZNF713Q8N859 430 aaPredicted RBP9.81□□□□□ -0.84
GGA3-202ENST00000538886 SLC9A2Q9UBY0 812 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.81□□□□□ -0.842e-10■■■□□ 18.4
GGA3-202ENST00000538886 SSC5DA1L4H1 1573 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 AKAP11Q9UKA4 1901 aa9.81□□□□□ -0.84
GGA3-202ENST00000538886 PP2D1A8MPX8 630 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 TBCAO75347 108 aaKnown RBP9.8□□□□□ -0.84
GGA3-202ENST00000538886 SRGAP2CP0DJJ0 459 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 BCRP11274 1271 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 CCL5P13501 91 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 POLGP54098 1239 aaPredicted RBP9.8□□□□□ -0.84
GGA3-202ENST00000538886 CACNB2Q08289 660 aaPredicted RBP9.8□□□□□ -0.84
GGA3-202ENST00000538886 FAM102BQ5T8I3 360 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 CNNM3Q8NE01 707 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 NLRP4Q96MN2 994 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 SCAND2PQ9GZW5 306 aaPredicted RBP9.8□□□□□ -0.84
GGA3-202ENST00000538886 ZMYND12Q9H0C1 365 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 MTMR6Q9Y217 621 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 SOWAHBA6NEL2 793 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 SNHG28P0DPA3 235 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 HSPA8P11142 646 aaKnown RBP9.8□□□□□ -0.84
GGA3-202ENST00000538886 PSMC6P62333 389 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 TBC1D8BQ0IIM8 1120 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 ZSCAN23Q3MJ62 389 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 MIS18BP1Q6P0N0 1132 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 BTNL9Q6UXG8 535 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 SLAIN1Q8ND83 568 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 CENPFP49454 3210 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.8□□□□□ -0.84
GGA3-202ENST00000538886 SYN1P17600 705 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 TCF7P36402 384 aaPredicted RBP9.8□□□□□ -0.84
GGA3-202ENST00000538886 STAT5BP51692 787 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 FAM160B1Q5W0V3 765 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 TMEM87AQ8NBN3 555 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 ERCC4Q92889 916 aaPredicted RBP9.8□□□□□ -0.84
GGA3-202ENST00000538886 KCNB2Q92953 911 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 MAP3K14Q99558 947 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 OGFRQ9NZT2 677 aa9.8□□□□□ -0.84
GGA3-202ENST00000538886 MEIS2O14770 477 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 DNM2P50570 870 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 FSCN1Q16658 493 aaKnown RBP9.79□□□□□ -0.84
GGA3-202ENST00000538886 EARS2Q5JPH6 523 aaKnown RBP9.79□□□□□ -0.84
GGA3-202ENST00000538886 DRC7Q8IY82 874 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 SYCP3Q8IZU3 236 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 ZNF710Q8N1W2 664 aa9.79□□□□□ -0.84
GGA3-202ENST00000538886 PAWRQ96IZ0 340 aaKnown RBP9.79□□□□□ -0.84
GGA3-202ENST00000538886 LBHD1Q9BQE6 289 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms