RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 CDKL5O76039 1030 aa15.67■□□□□ 0.1
CD9-208ENST00000538834 MYL3P08590 195 aa15.67■□□□□ 0.1
CD9-208ENST00000538834 FAM86B2P0C5J1 330 aa15.67■□□□□ 0.1
CD9-208ENST00000538834 ARHGAP4P98171 946 aa15.67■□□□□ 0.1
CD9-208ENST00000538834 AKAP17AQ02040 695 aaKnown RBP15.67■□□□□ 0.1
CD9-208ENST00000538834 CEP55Q53EZ4 464 aa15.67■□□□□ 0.1
CD9-208ENST00000538834 HABP4Q5JVS0 413 aaKnown RBP15.67■□□□□ 0.1
CD9-208ENST00000538834 GALNT17Q6IS24 598 aa15.67■□□□□ 0.1
CD9-208ENST00000538834 CPLX2Q6PUV4 134 aaKnown RBP15.67■□□□□ 0.1
CD9-208ENST00000538834 CHRDL2Q6WN34 429 aa15.67■□□□□ 0.1
CD9-208ENST00000538834 REXO1Q8N1G1 1221 aaKnown RBP15.67■□□□□ 0.1
CD9-208ENST00000538834 NECAB1Q8N987 351 aa15.67■□□□□ 0.1
CD9-208ENST00000538834 GIMAP8Q8ND71 665 aaPredicted RBP15.67■□□□□ 0.1
CD9-208ENST00000538834 TBC1D32Q96NH3 1257 aa15.67■□□□□ 0.1
CD9-208ENST00000538834 EHMT1Q9H9B1 1298 aa15.67■□□□□ 0.1
CD9-208ENST00000538834 KCNH7Q9NS40 1196 aa15.67■□□□□ 0.1
CD9-208ENST00000538834 PCDHA4Q9UN74 947 aa15.67■□□□□ 0.1
CD9-208ENST00000538834 LIMCH1Q9UPQ0 1083 aa15.67■□□□□ 0.1
CD9-208ENST00000538834 SZT2Q5T011 3432 aa15.67■□□□□ 0.1
CD9-208ENST00000538834 NFASCO94856 1347 aa15.67■□□□□ 0.1
CD9-208ENST00000538834 SIP14410 1827 aa15.66■□□□□ 0.1
CD9-208ENST00000538834 DHX15O43143 795 aaKnown RBP15.66■□□□□ 0.1
CD9-208ENST00000538834 B4GALT4O60513 344 aa15.66■□□□□ 0.1
CD9-208ENST00000538834 PQBP1O60828 265 aaKnown RBP15.66■□□□□ 0.1
CD9-208ENST00000538834 TIMP1P01033 207 aa15.66■□□□□ 0.1
CD9-208ENST00000538834 ARP10275 920 aa15.66■□□□□ 0.1
CD9-208ENST00000538834 JAKMIP3Q5VZ66 844 aa15.66■□□□□ 0.1
CD9-208ENST00000538834 BICD2Q8TD16 824 aa15.66■□□□□ 0.1
CD9-208ENST00000538834 LENG9Q96B70 501 aa15.66■□□□□ 0.1
CD9-208ENST00000538834 VWCEQ96DN2 955 aa15.66■□□□□ 0.1
CD9-208ENST00000538834 SPATA33Q96N06 139 aa15.66■□□□□ 0.1
CD9-208ENST00000538834 BACH2Q9BYV9 841 aa15.66■□□□□ 0.1
CD9-208ENST00000538834 GTF3C3Q9Y5Q9 886 aa15.66■□□□□ 0.1
CD9-208ENST00000538834 GBF1Q92538 1859 aa15.65■□□□□ 0.1
CD9-208ENST00000538834 PTPRSQ13332 1948 aa15.65■□□□□ 0.1
CD9-208ENST00000538834 GSTTP1A0A1W2PQM5 241 aa15.65■□□□□ 0.1
CD9-208ENST00000538834 ATG7O95352 703 aa15.65■□□□□ 0.1
CD9-208ENST00000538834 USP11P51784 963 aa15.65■□□□□ 0.1
CD9-208ENST00000538834 RBL2Q08999 1139 aa15.65■□□□□ 0.1
CD9-208ENST00000538834 MTMR1Q13613 665 aa15.65■□□□□ 0.1
CD9-208ENST00000538834 CYFIP1Q7L576 1253 aa15.65■□□□□ 0.1
CD9-208ENST00000538834 RASGRP4Q8TDF6 673 aa15.65■□□□□ 0.1
CD9-208ENST00000538834 MBOAT7Q96N66 472 aa15.65■□□□□ 0.1
CD9-208ENST00000538834 TRPV6Q9H1D0 765 aa15.65■□□□□ 0.1
CD9-208ENST00000538834 CYP3A7-CYP3A51PA0A087WV96 503 aa15.64■□□□□ 0.09
CD9-208ENST00000538834 CYP3A7P24462 503 aa15.64■□□□□ 0.09
CD9-208ENST00000538834 PSEN2P49810 448 aa15.64■□□□□ 0.09
CD9-208ENST00000538834 ADAM17P78536 824 aa15.64■□□□□ 0.09
CD9-208ENST00000538834 ITGB3BPQ13352 177 aaPredicted RBP15.64■□□□□ 0.09
CD9-208ENST00000538834 HIC1Q14526 733 aa15.64■□□□□ 0.09
CD9-208ENST00000538834 RABEP1Q15276 862 aa15.64■□□□□ 0.09
CD9-208ENST00000538834 BLIDQ8IZY5 108 aa15.64■□□□□ 0.09
CD9-208ENST00000538834 BADQ92934 168 aa15.64■□□□□ 0.09
CD9-208ENST00000538834 TNFRSF25Q93038 417 aa15.64■□□□□ 0.09
CD9-208ENST00000538834 VTI1AQ96AJ9 217 aa15.64■□□□□ 0.09
CD9-208ENST00000538834 NOC4LQ9BVI4 516 aaKnown RBP15.64■□□□□ 0.09
CD9-208ENST00000538834 MLXIPQ9HAP2 919 aa15.64■□□□□ 0.09
CD9-208ENST00000538834 AGO4Q9HCK5 861 aaKnown RBP15.64■□□□□ 0.09
CD9-208ENST00000538834 GJB4Q9NTQ9 266 aa15.64■□□□□ 0.09
CD9-208ENST00000538834 TMEM39AQ9NV64 488 aa15.64■□□□□ 0.09
CD9-208ENST00000538834 ORC3Q9UBD5 711 aaPredicted RBP15.64■□□□□ 0.09
CD9-208ENST00000538834 GTF2IRD1Q9UHL9 959 aa15.64■□□□□ 0.09
CD9-208ENST00000538834 IGKV6D-21A0A0A0MT36 114 aa15.63■□□□□ 0.09
CD9-208ENST00000538834 TLR3O15455 904 aaKnown RBP15.63■□□□□ 0.09
CD9-208ENST00000538834 DTNBO60941 627 aa15.63■□□□□ 0.09
CD9-208ENST00000538834 LGR5O75473 907 aa15.63■□□□□ 0.09
CD9-208ENST00000538834 LGALS2P05162 132 aa15.63■□□□□ 0.09
CD9-208ENST00000538834 NLRP5P59047 1200 aa15.63■□□□□ 0.09
CD9-208ENST00000538834 MDM2Q00987 491 aaPredicted RBP15.63■□□□□ 0.09
CD9-208ENST00000538834 MFSD5Q6N075 450 aa15.63■□□□□ 0.09
CD9-208ENST00000538834 MOXD1Q6UVY6 613 aa15.63■□□□□ 0.09
CD9-208ENST00000538834 ZSCAN31Q96LW9 406 aaPredicted RBP15.63■□□□□ 0.09
CD9-208ENST00000538834 PCYT2Q99447 389 aa15.63■□□□□ 0.09
CD9-208ENST00000538834 LLPHQ9BRT6 129 aaKnown RBP15.63■□□□□ 0.09
CD9-208ENST00000538834 H3BRB1 525 aa15.62■□□□□ 0.09
CD9-208ENST00000538834 JAK2O60674 1132 aa15.62■□□□□ 0.09
CD9-208ENST00000538834 SUPT20HL2P0C7V6 817 aa15.62■□□□□ 0.09
CD9-208ENST00000538834 ZNF286BP0CG31 522 aa15.62■□□□□ 0.09
CD9-208ENST00000538834 EPHB4P54760 987 aa15.62■□□□□ 0.09
CD9-208ENST00000538834 MFSD10Q14728 455 aa15.62■□□□□ 0.09
CD9-208ENST00000538834 KIAA0753Q2KHM9 967 aa15.62■□□□□ 0.09
CD9-208ENST00000538834 GDF6Q6KF10 455 aaPredicted RBP15.62■□□□□ 0.09
CD9-208ENST00000538834 C16orf59Q7L2K0 433 aa15.62■□□□□ 0.09
CD9-208ENST00000538834 SEPT1Q8WYJ6 367 aa15.62■□□□□ 0.09
CD9-208ENST00000538834 KATNAL1Q9BW62 490 aa15.62■□□□□ 0.09
CD9-208ENST00000538834 TUT1Q9H6E5 874 aaKnown RBP15.62■□□□□ 0.09
CD9-208ENST00000538834 SH2B1Q9NRF2 756 aaPredicted RBP15.62■□□□□ 0.09
CD9-208ENST00000538834 TRMT13Q9NUP7 481 aaKnown RBP15.62■□□□□ 0.09
CD9-208ENST00000538834 HDAC6Q9UBN7 1215 aa15.62■□□□□ 0.09
CD9-208ENST00000538834 KCNJ14Q9UNX9 436 aa15.62■□□□□ 0.09
CD9-208ENST00000538834 EMSYQ7Z589 1322 aa15.62■□□□□ 0.09
CD9-208ENST00000538834 MICAL3Q7RTP6 2002 aa15.61■□□□□ 0.09
CD9-208ENST00000538834 CD2BP2O95400 341 aaKnown RBP15.61■□□□□ 0.09
CD9-208ENST00000538834 FXR1P51114 621 aaKnown RBP eCLIP15.61■□□□□ 0.09
CD9-208ENST00000538834 TRIM71Q2Q1W2 868 aaKnown RBP15.61■□□□□ 0.09
CD9-208ENST00000538834 LRIT3Q3SXY7 679 aa15.61■□□□□ 0.09
CD9-208ENST00000538834 Q4G0T1 1027 aa15.61■□□□□ 0.09
CD9-208ENST00000538834 RASIP1Q5U651 963 aa15.61■□□□□ 0.09
CD9-208ENST00000538834 B3GNT9Q6UX72 402 aa15.61■□□□□ 0.09
CD9-208ENST00000538834 WASF1Q92558 559 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms