RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 A0A1W2PQ64 194 aa19.46■□□□□ 0.71
CLN6-202ENST00000538696 A0A1W2PQD8 194 aa19.46■□□□□ 0.71
CLN6-202ENST00000538696 ATP9AO75110 1047 aa19.46■□□□□ 0.71
CLN6-202ENST00000538696 KCNA2P16389 499 aa19.46■□□□□ 0.71
CLN6-202ENST00000538696 UBA1P22314 1058 aaKnown RBP19.46■□□□□ 0.71
CLN6-202ENST00000538696 PTGS1P23219 599 aa19.46■□□□□ 0.71
CLN6-202ENST00000538696 SP2Q02086 613 aa19.46■□□□□ 0.71
CLN6-202ENST00000538696 TTLL4Q14679 1199 aa19.46■□□□□ 0.71
CLN6-202ENST00000538696 CCDC183Q5T5S1 534 aa19.46■□□□□ 0.71
CLN6-202ENST00000538696 ADALQ6DHV7 355 aa19.46■□□□□ 0.71
CLN6-202ENST00000538696 GJA10Q969M2 543 aa19.46■□□□□ 0.71
CLN6-202ENST00000538696 SYAP1Q96A49 352 aaPredicted RBP19.46■□□□□ 0.71
CLN6-202ENST00000538696 CDHR1Q96JP9 859 aa19.46■□□□□ 0.71
CLN6-202ENST00000538696 KCNMB3Q9NPA1 279 aa19.46■□□□□ 0.71
CLN6-202ENST00000538696 DDX41Q9UJV9 622 aaKnown RBP19.46■□□□□ 0.71
CLN6-202ENST00000538696 FBXO2Q9UK22 296 aaPredicted RBP19.46■□□□□ 0.71
CLN6-202ENST00000538696 TXNP10599 105 aaKnown RBP19.45■□□□□ 0.7
CLN6-202ENST00000538696 AKR1A1P14550 325 aa19.45■□□□□ 0.7
CLN6-202ENST00000538696 SMPD1P17405 629 aa19.45■□□□□ 0.7
CLN6-202ENST00000538696 ITGB3BPQ13352 177 aaPredicted RBP19.45■□□□□ 0.7
CLN6-202ENST00000538696 CALCRLQ16602 461 aa19.45■□□□□ 0.7
CLN6-202ENST00000538696 LY6KQ17RY6 165 aa19.45■□□□□ 0.7
CLN6-202ENST00000538696 GJC2Q5T442 439 aaPredicted RBP19.45■□□□□ 0.7
CLN6-202ENST00000538696 IQSEC1Q6DN90 963 aa19.45■□□□□ 0.7
CLN6-202ENST00000538696 KCNV1Q6PIU1 500 aa19.45■□□□□ 0.7
CLN6-202ENST00000538696 C4orf32Q8N8J7 132 aa19.45■□□□□ 0.7
CLN6-202ENST00000538696 MRPS27Q92552 414 aaKnown RBP19.45■□□□□ 0.7
CLN6-202ENST00000538696 HAS1Q92839 578 aa19.45■□□□□ 0.7
CLN6-202ENST00000538696 COPS5Q92905 334 aa19.45■□□□□ 0.7
CLN6-202ENST00000538696 SLC5A5Q92911 643 aa19.45■□□□□ 0.7
CLN6-202ENST00000538696 LENG1Q96BZ8 264 aaPredicted RBP19.45■□□□□ 0.7
CLN6-202ENST00000538696 ZNF577Q9BSK1 485 aa19.45■□□□□ 0.7
CLN6-202ENST00000538696 FAM184BQ9ULE4 1060 aa19.45■□□□□ 0.7
CLN6-202ENST00000538696 MORC2Q9Y6X9 1032 aaPredicted RBP19.45■□□□□ 0.7
CLN6-202ENST00000538696 MAFGO15525 162 aa19.44■□□□□ 0.7
CLN6-202ENST00000538696 SEPT4O43236 478 aa19.44■□□□□ 0.7
CLN6-202ENST00000538696 CUTAO60888 179 aa19.44■□□□□ 0.7
CLN6-202ENST00000538696 BMP15O95972 392 aa19.44■□□□□ 0.7
CLN6-202ENST00000538696 OR52Z1P0C646 297 aa19.44■□□□□ 0.7
CLN6-202ENST00000538696 CNGA1P29973 690 aa19.44■□□□□ 0.7
CLN6-202ENST00000538696 GRIN1Q05586 938 aa19.44■□□□□ 0.7
CLN6-202ENST00000538696 DUSP28Q4G0W2 176 aa19.44■□□□□ 0.7
CLN6-202ENST00000538696 KRI1Q8N9T8 703 aaKnown RBP19.44■□□□□ 0.7
CLN6-202ENST00000538696 CLIC6Q96NY7 704 aa19.44■□□□□ 0.7
CLN6-202ENST00000538696 MTMR9Q96QG7 549 aa19.44■□□□□ 0.7
CLN6-202ENST00000538696 MCOLN1Q9GZU1 580 aa19.44■□□□□ 0.7
CLN6-202ENST00000538696 BCAS3Q9H6U6 928 aa19.44■□□□□ 0.7
CLN6-202ENST00000538696 IPO5O00410 1097 aaKnown RBP19.43■□□□□ 0.7
CLN6-202ENST00000538696 TBX3O15119 743 aa19.43■□□□□ 0.7
CLN6-202ENST00000538696 SORBS3O60504 671 aa19.43■□□□□ 0.7
CLN6-202ENST00000538696 NR1I2O75469 434 aa19.43■□□□□ 0.7
CLN6-202ENST00000538696 TGFB3P10600 412 aa19.43■□□□□ 0.7
CLN6-202ENST00000538696 ATP2C1P98194 919 aaPredicted RBP19.43■□□□□ 0.7
CLN6-202ENST00000538696 TNFAIP2Q03169 654 aa19.43■□□□□ 0.7
CLN6-202ENST00000538696 PTGDRQ13258 359 aa19.43■□□□□ 0.7
CLN6-202ENST00000538696 GSE1Q14687 1217 aa19.43■□□□□ 0.7
CLN6-202ENST00000538696 SHC4Q6S5L8 630 aa19.43■□□□□ 0.7
CLN6-202ENST00000538696 CCDC73Q6ZRK6 1079 aa19.43■□□□□ 0.7
CLN6-202ENST00000538696 ARMC5Q96C12 935 aa19.43■□□□□ 0.7
CLN6-202ENST00000538696 SENP7Q9BQF6 1050 aa19.43■□□□□ 0.7
CLN6-202ENST00000538696 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.43■□□□□ 0.74e-8■■■■□ 25.2
CLN6-202ENST00000538696 UNC93B1Q9H1C4 597 aa19.43■□□□□ 0.7
CLN6-202ENST00000538696 DACT1Q9NYF0 836 aa19.43■□□□□ 0.7
CLN6-202ENST00000538696 GNEQ9Y223 722 aaKnown RBP19.43■□□□□ 0.7
CLN6-202ENST00000538696 NFASCO94856 1347 aa19.43■□□□□ 0.7
CLN6-202ENST00000538696 DHX15O43143 795 aaKnown RBP19.42■□□□□ 0.7
CLN6-202ENST00000538696 FARP2O94887 1054 aaPredicted RBP19.42■□□□□ 0.7
CLN6-202ENST00000538696 GGPS1O95749 300 aa19.42■□□□□ 0.7
CLN6-202ENST00000538696 ARHGAP1Q07960 439 aa19.42■□□□□ 0.7
CLN6-202ENST00000538696 MTFR1Q15390 333 aa19.42■□□□□ 0.7
CLN6-202ENST00000538696 ZNF333Q96JL9 665 aa19.42■□□□□ 0.7
CLN6-202ENST00000538696 FAM20AQ96MK3 541 aa19.42■□□□□ 0.7
CLN6-202ENST00000538696 HMX1Q9NP08 348 aaPredicted RBP19.42■□□□□ 0.7
CLN6-202ENST00000538696 A0A1B0GVL5 298 aa19.41■□□□□ 0.7
CLN6-202ENST00000538696 DDX39AO00148 427 aaKnown RBP19.41■□□□□ 0.7
CLN6-202ENST00000538696 NKRFO15226 690 aaKnown RBP eCLIP19.41■□□□□ 0.7
CLN6-202ENST00000538696 PSMD10O75832 226 aa19.41■□□□□ 0.7
CLN6-202ENST00000538696 CMA1P23946 247 aa19.41■□□□□ 0.7
CLN6-202ENST00000538696 ZNF445P59923 1031 aa19.41■□□□□ 0.7
CLN6-202ENST00000538696 FAM160A1Q05DH4 1040 aa19.41■□□□□ 0.7
CLN6-202ENST00000538696 NEDD9Q14511 834 aa19.41■□□□□ 0.7
CLN6-202ENST00000538696 CELF3Q5SZQ8 465 aaKnown RBP19.41■□□□□ 0.7
CLN6-202ENST00000538696 RESP18Q5W5W9 173 aa19.41■□□□□ 0.7
CLN6-202ENST00000538696 ENGASEQ8NFI3 743 aa19.41■□□□□ 0.7
CLN6-202ENST00000538696 RIT2Q99578 217 aa19.41■□□□□ 0.7
CLN6-202ENST00000538696 TEKT3Q9BXF9 490 aa19.41■□□□□ 0.7
CLN6-202ENST00000538696 DDX19AQ9NUU7 478 aaKnown RBP19.41■□□□□ 0.7
CLN6-202ENST00000538696 DDX20Q9UHI6 824 aaKnown RBP19.41■□□□□ 0.7
CLN6-202ENST00000538696 VAV3Q9UKW4 847 aa19.41■□□□□ 0.7
CLN6-202ENST00000538696 TELO2Q9Y4R8 837 aa19.41■□□□□ 0.7
CLN6-202ENST00000538696 SRPRBQ9Y5M8 271 aaKnown RBP19.41■□□□□ 0.7
CLN6-202ENST00000538696 SYCE3A1L190 88 aa19.4■□□□□ 0.7
CLN6-202ENST00000538696 POTEFA5A3E0 1075 aa19.4■□□□□ 0.7
CLN6-202ENST00000538696 LAD1O00515 517 aa19.4■□□□□ 0.7
CLN6-202ENST00000538696 MARCH6O60337 910 aa19.4■□□□□ 0.7
CLN6-202ENST00000538696 GAS7O60861 476 aa19.4■□□□□ 0.7
CLN6-202ENST00000538696 MYCP01106 439 aaPredicted RBP19.4■□□□□ 0.7
CLN6-202ENST00000538696 GH1P01241 217 aa19.4■□□□□ 0.7
CLN6-202ENST00000538696 CCL5P13501 91 aa19.4■□□□□ 0.7
CLN6-202ENST00000538696 PFKFB1P16118 471 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms