RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 ZNF157P51786 506 aaPredicted RBP10.29□□□□□ -0.76
DDB1-211ENST00000538280 ZBED6P86452 979 aa10.29□□□□□ -0.76
DDB1-211ENST00000538280 AMPD2Q01433 879 aa10.29□□□□□ -0.76
DDB1-211ENST00000538280 LRRC63Q05C16 580 aa10.29□□□□□ -0.76
DDB1-211ENST00000538280 ECM1Q16610 540 aa10.29□□□□□ -0.76
DDB1-211ENST00000538280 CERKLQ49MI3 558 aaPredicted RBP10.29□□□□□ -0.76
DDB1-211ENST00000538280 ZCWPW2Q504Y3 356 aa10.29□□□□□ -0.76
DDB1-211ENST00000538280 SLFN13Q68D06 897 aa10.29□□□□□ -0.76
DDB1-211ENST00000538280 BTNL9Q6UXG8 535 aa10.29□□□□□ -0.76
DDB1-211ENST00000538280 LRRC55Q6ZSA7 311 aa10.29□□□□□ -0.76
DDB1-211ENST00000538280 KCTD1Q719H9 257 aa10.29□□□□□ -0.76
DDB1-211ENST00000538280 SRGAP1Q7Z6B7 1085 aa10.29□□□□□ -0.76
DDB1-211ENST00000538280 ZC3H3Q8IXZ2 948 aaKnown RBP10.29□□□□□ -0.76
DDB1-211ENST00000538280 CDCA5Q96FF9 252 aa10.29□□□□□ -0.76
DDB1-211ENST00000538280 CSRNP1Q96S65 589 aa10.29□□□□□ -0.76
DDB1-211ENST00000538280 ARID3AQ99856 593 aa10.29□□□□□ -0.76
DDB1-211ENST00000538280 ANO3Q9BYT9 981 aa10.29□□□□□ -0.76
DDB1-211ENST00000538280 HAUS4Q9H6D7 363 aa10.29□□□□□ -0.76
DDB1-211ENST00000538280 PSTPIP2Q9H939 334 aa10.29□□□□□ -0.76
DDB1-211ENST00000538280 LZTFL1Q9NQ48 299 aa10.29□□□□□ -0.76
DDB1-211ENST00000538280 ARGLU1Q9NWB6 273 aaPredicted RBP10.29□□□□□ -0.76
DDB1-211ENST00000538280 SIK3Q9Y2K2 1263 aa10.29□□□□□ -0.76
DDB1-211ENST00000538280 PCDHAC2Q9Y5I4 1007 aa10.29□□□□□ -0.76
DDB1-211ENST00000538280 MKI67P46013 3256 aaKnown RBP10.29□□□□□ -0.76
DDB1-211ENST00000538280 RBBP6Q7Z6E9 1792 aaKnown RBP10.29□□□□□ -0.76
DDB1-211ENST00000538280 FRMD3A2A2Y4 597 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 SPDYE4A6NLX3 237 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 EIF3CLB5ME19 914 aaKnown RBP10.28□□□□□ -0.76
DDB1-211ENST00000538280 G3V3G9 751 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 MPHOSPH10O00566 681 aaKnown RBP10.28□□□□□ -0.76
DDB1-211ENST00000538280 MEIS2O14770 477 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 TBX3O15119 743 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 FGFR1OPO95684 399 aaKnown RBP10.28□□□□□ -0.76
DDB1-211ENST00000538280 SLURP2P0DP57 97 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 ZSCAN20P17040 1043 aaPredicted RBP10.28□□□□□ -0.76
DDB1-211ENST00000538280 MTIF2P46199 727 aaKnown RBP10.28□□□□□ -0.76
DDB1-211ENST00000538280 TUBB4BP68371 445 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 GABPB1Q06547 395 aaPredicted RBP10.28□□□□□ -0.76
DDB1-211ENST00000538280 TBC1D8BQ0IIM8 1120 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 BMS1Q14692 1282 aaKnown RBP10.28□□□□□ -0.76
DDB1-211ENST00000538280 CDC37Q16543 378 aaPredicted RBP10.28□□□□□ -0.76
DDB1-211ENST00000538280 MAN2A1Q16706 1144 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 Q4G0T1 1027 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 VWA3BQ502W6 1294 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 ZNF569Q5MCW4 686 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 UTP14CQ5TAP6 766 aaKnown RBP10.28□□□□□ -0.76
DDB1-211ENST00000538280 DCAF8Q5TAQ9 597 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 CCDC170Q8IYT3 715 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 KRT222Q8N1A0 295 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 CEP112Q8N8E3 955 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 MSANTD4Q8NCY6 345 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 DDX12PQ92771 950 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 GOLGA1Q92805 767 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 HPS3Q969F9 1004 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 CDK5RAP3Q96JB5 506 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 PURBQ96QR8 312 aaKnown RBP10.28□□□□□ -0.76
DDB1-211ENST00000538280 EIF3CQ99613 913 aaKnown RBP10.28□□□□□ -0.76
DDB1-211ENST00000538280 SLF1Q9BQI6 1058 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 NT5C3AQ9H0P0 336 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 SLC39A2Q9NP94 309 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 SAGE1Q9NXZ1 904 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 PCDHA2Q9Y5H9 948 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 FHOD1Q9Y613 1164 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 BRCA2P51587 3418 aa10.28□□□□□ -0.76
DDB1-211ENST00000538280 CENPFP49454 3210 aa10.27□□□□□ -0.77
DDB1-211ENST00000538280 CTAGE9A4FU28 777 aa10.27□□□□□ -0.77
DDB1-211ENST00000538280 NKRFO15226 690 aaKnown RBP eCLIP10.27□□□□□ -0.77
DDB1-211ENST00000538280 ABL1P00519 1130 aa10.27□□□□□ -0.77
DDB1-211ENST00000538280 PRKCSHP14314 528 aaPredicted RBP10.27□□□□□ -0.77
DDB1-211ENST00000538280 CIITAP33076 1130 aa10.27□□□□□ -0.77
DDB1-211ENST00000538280 SLC1A4P43007 532 aa10.27□□□□□ -0.77
DDB1-211ENST00000538280 CACNB3P54284 484 aa10.27□□□□□ -0.77
DDB1-211ENST00000538280 MARSP56192 900 aaKnown RBP10.27□□□□□ -0.77
DDB1-211ENST00000538280 ICA1Q05084 483 aa10.27□□□□□ -0.77
DDB1-211ENST00000538280 SPIRE1Q08AE8 756 aa10.27□□□□□ -0.77
DDB1-211ENST00000538280 COASYQ13057 564 aa10.27□□□□□ -0.77
DDB1-211ENST00000538280 WHAMMP3Q1A5X7 153 aa10.27□□□□□ -0.77
DDB1-211ENST00000538280 SHROOM1Q2M3G4 852 aaPredicted RBP10.27□□□□□ -0.77
DDB1-211ENST00000538280 FKBP15Q5T1M5 1219 aa10.27□□□□□ -0.77
DDB1-211ENST00000538280 ANGEL2Q5VTE6 544 aaKnown RBP10.27□□□□□ -0.77
DDB1-211ENST00000538280 KIAA0825Q8IV33 1275 aa10.27□□□□□ -0.77
DDB1-211ENST00000538280 ETNPPLQ8TBG4 499 aa10.27□□□□□ -0.77
DDB1-211ENST00000538280 P2RX7Q99572 595 aaKnown RBP10.27□□□□□ -0.77
DDB1-211ENST00000538280 NAPGQ99747 312 aaPredicted RBP10.27□□□□□ -0.77
DDB1-211ENST00000538280 NOC4LQ9BVI4 516 aaKnown RBP10.27□□□□□ -0.77
DDB1-211ENST00000538280 EDEM3Q9BZQ6 932 aa10.27□□□□□ -0.77
DDB1-211ENST00000538280 PCDHA1Q9Y5I3 950 aa10.27□□□□□ -0.77
DDB1-211ENST00000538280 FAM196BA6NMK8 535 aa10.26□□□□□ -0.77
DDB1-211ENST00000538280 F5H6K3 240 aa10.26□□□□□ -0.77
DDB1-211ENST00000538280 LCA5LO95447 670 aa10.26□□□□□ -0.77
DDB1-211ENST00000538280 NDUFB10O96000 172 aa10.26□□□□□ -0.77
DDB1-211ENST00000538280 FOSP01100 380 aaPredicted RBP10.26□□□□□ -0.77
DDB1-211ENST00000538280 VIL1P09327 827 aaKnown RBP10.26□□□□□ -0.77
DDB1-211ENST00000538280 CYLC1P35663 651 aaPredicted RBP10.26□□□□□ -0.77
DDB1-211ENST00000538280 SREBF1P36956 1147 aa10.26□□□□□ -0.77
DDB1-211ENST00000538280 KLK7P49862 253 aa10.26□□□□□ -0.77
DDB1-211ENST00000538280 KRT83P78385 493 aa10.26□□□□□ -0.77
DDB1-211ENST00000538280 JAG1P78504 1218 aa10.26□□□□□ -0.77
DDB1-211ENST00000538280 KLRC3Q07444 240 aa10.26□□□□□ -0.77
DDB1-211ENST00000538280 DMTNQ08495 405 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms