RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-208	ENST00000538266	DEK	P35659	375 aa	Known RBP	5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	RACK1	P63244	317 aa	Known RBP	5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	TNIP1	Q15025	636 aa		5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	RNF43	Q68DV7	783 aa		5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	CIAPIN1	Q6FI81	312 aa		5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	CYFIP1	Q7L576	1253 aa		5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	CHD1L	Q86WJ1	897 aa		5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	ZNF507	Q8TCN5	953 aa		5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	ISL2	Q96A47	359 aa		5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	EAF2	Q96CJ1	260 aa	Predicted RBP	5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	FAM84B	Q96KN1	310 aa	Predicted RBP	5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	DBNDD2	Q9BQY9	259 aa		5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	SPON2	Q9BUD6	331 aa		5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	LNPK	Q9C0E8	428 aa		5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	WNT10A	Q9GZT5	417 aa		5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	CCDC8	Q9H0W5	538 aa	Predicted RBP	5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	CD209	Q9NNX6	404 aa		5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	ADAMTS1	Q9UHI8	967 aa		5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	DBNL	Q9UJU6	430 aa	Known RBP	5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	DDX41	Q9UJV9	622 aa	Known RBP	5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	PCDHGB7	Q9Y5F8	929 aa		5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266	KDM2B	Q8NHM5	1336 aa		5.21	□□□□□ -1.58
SNHG1-208	ENST00000538266		K7ELQ4	463 aa	Predicted RBP	5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	FZD9	O00144	591 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	ERC2	O15083	957 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	TLR3	O15455	904 aa	Known RBP	5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	DYNC1LI2	O43237	492 aa	Predicted RBP	5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	IL1R1	P14778	569 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	MX1	P20591	662 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	PHKA1	P46020	1223 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	PRELP	P51888	382 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	ETF1	P62495	437 aa	Known RBP	5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	NUCB1	Q02818	461 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	CXCL9	Q07325	125 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	CHAF1A	Q13111	956 aa	Predicted RBP	5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	RASGRF1	Q13972	1273 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	MFSD14B	Q5SR56	506 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	ZBTB37	Q5TC79	503 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	STRIP1	Q5VSL9	837 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	TTLL5	Q6EMB2	1281 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	ZNF654	Q8IZM8	581 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	GPC2	Q8N158	579 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	FBXL6	Q8N531	539 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	ZGPAT	Q8N5A5	531 aa	Known RBP	5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	SPATA5	Q8NB90	893 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	TDRD7	Q8NHU6	1098 aa	Known RBP	5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	FBXO27	Q8NI29	283 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	WDR66	Q8TBY9	1149 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	TBC1D22A	Q8WUA7	517 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	KCNQ5	Q9NR82	932 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	ECHDC1	Q9NTX5	307 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	DENND2A	Q9ULE3	1009 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	COL4A5	P29400	1685 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	MYO3B	Q8WXR4	1341 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	ZNF541	Q9H0D2	1346 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	IRS2	Q9Y4H2	1338 aa		5.2	□□□□□ -1.58
SNHG1-208	ENST00000538266	PSME4	Q14997	1843 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	IQCA1L	A6NCM1	817 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	GLTPD2	A6NH11	291 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	YDJC	A8MPS7	323 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	PSMD14	O00487	310 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	GSC2	O15499	205 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	GLRX3	O76003	335 aa	Known RBP	5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	IGLV1-40	P01703	118 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	TCF3	P15923	654 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	FST	P19883	344 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	RPS12	P25398	132 aa	Known RBP	5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	GRK4	P32298	578 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	NFIA	Q12857	509 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	MPP2	Q14168	576 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	PRSS36	Q5K4E3	855 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	SPTY2D1	Q68D10	685 aa	Predicted RBP	5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	SEZ6L2	Q6UXD5	910 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	KIAA0825	Q8IV33	1275 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	KCT2	Q8NC54	265 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	AGBL3	Q8NEM8	1001 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	ZNF526	Q8TF50	670 aa	Predicted RBP	5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	ZNF512B	Q96KM6	892 aa	Predicted RBP	5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	MFSD14A	Q96MC6	490 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	TBC1D32	Q96NH3	1257 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	IPO9	Q96P70	1041 aa	Known RBP	5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	DNAJC2	Q99543	621 aa	Known RBP	5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	C1GALT1	Q9NS00	363 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	LRP2BP	Q9P2M1	347 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	ABCF2	Q9UG63	623 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	PRKAG2	Q9UGJ0	569 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	HDAC9	Q9UKV0	1011 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	JAG2	Q9Y219	1238 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	TACC3	Q9Y6A5	838 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	MAST3	O60307	1309 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	PDS5A	Q29RF7	1337 aa	Known RBP	5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	TTC41P	Q6P2S7	1318 aa		5.19	□□□□□ -1.58
SNHG1-208	ENST00000538266	SCN9A	Q15858	1988 aa		5.18	□□□□□ -1.58
SNHG1-208	ENST00000538266		F8W031	263 aa	Predicted RBP	5.18	□□□□□ -1.58
SNHG1-208	ENST00000538266		H7C1D1	291 aa		5.18	□□□□□ -1.58
SNHG1-208	ENST00000538266	GOLIM4	O00461	696 aa		5.18	□□□□□ -1.58
SNHG1-208	ENST00000538266	IDH1	O75874	414 aa	Known RBP	5.18	□□□□□ -1.58
SNHG1-208	ENST00000538266	DDN	O94850	711 aa	Predicted RBP	5.18	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms