RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 NACC1Q96RE7 527 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 TUBGCP2Q9BSJ2 902 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 MSTO1Q9BUK6 570 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 TUBB2BQ9BVA1 445 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 HACD3Q9P035 362 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 KDM5DQ9BY66 1539 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 NMT2O60551 498 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 TROVE2P10155 538 aaKnown RBP eCLIP12.16□□□□□ -0.46
LINC00346-201ENST00000538077 C2orf54Q08AI8 447 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 OSBP2Q969R2 916 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 SNAP23O00161 211 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 KRT3P12035 628 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 SLC12A6Q9UHW9 1150 aa12.16□□□□□ -0.46
LINC00346-201ENST00000538077 ZMYND10O75800 440 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 MOCS3O95396 460 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 INPP5BP32019 993 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 RASGRF1Q13972 1273 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 SPDYE1Q8NFV5 336 aaPredicted RBP12.15□□□□□ -0.46
LINC00346-201ENST00000538077 OR6B3Q8NGW1 331 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.15□□□□□ -0.46
LINC00346-201ENST00000538077 CALN1Q9BXU9 219 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 LRRC4Q9HBW1 653 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 LMNB1P20700 586 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 MYO1EQ12965 1108 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 MAP7Q14244 749 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 HP1BP3Q5SSJ5 553 aaPredicted RBP12.15□□□□□ -0.46
LINC00346-201ENST00000538077 APOA5Q6Q788 366 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 KIF24Q5T7B8 1368 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 CYP21A2P08686 494 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 BRD3Q15059 726 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 ZNF394Q53GI3 561 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 TSC1Q92574 1164 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 CABS1Q96KC9 395 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 AIFM3Q96NN9 605 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 HEG1Q9ULI3 1381 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 RASEFQ8IZ41 740 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 GPT2Q8TD30 523 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 OTUD5Q96G74 571 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 TM6SF1Q9BZW5 370 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 ZSWIM5Q9P217 1185 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 DENND3A2RUS2 1198 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 BRD1O95696 1058 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 SRGAP2BP0DMP2 458 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 PEX3P56589 373 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 SPATA1Q5VX52 437 aa12.15□□□□□ -0.46
LINC00346-201ENST00000538077 ATP8B3O60423 1300 aa12.15□□□□□ -0.47
LINC00346-201ENST00000538077 SH2B2O14492 632 aaPredicted RBP12.14□□□□□ -0.47
LINC00346-201ENST00000538077 EPHB1P54762 984 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 PDE1BQ01064 536 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 RNF139Q8WU17 664 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 PLA2G4BP0C869 781 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 BASP1P80723 227 aaKnown RBP12.14□□□□□ -0.47
LINC00346-201ENST00000538077 THNSL1Q8IYQ7 743 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 MIPOL1Q8TD10 442 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 DACT3Q96B18 629 aaPredicted RBP12.14□□□□□ -0.47
LINC00346-201ENST00000538077 MAN1B1Q9UKM7 699 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 CPP00450 1065 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 SOX5P35711 763 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 GNGT1P63211 74 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 GUCY2DQ02846 1103 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 PDE1CQ14123 709 aaPredicted RBP12.14□□□□□ -0.47
LINC00346-201ENST00000538077 IQCB1Q15051 598 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 ANO4Q32M45 955 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 ARHGEF18Q6ZSZ5 1173 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 TEX2Q8IWB9 1127 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 MIS12Q9H081 205 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 VCXQ9H320 206 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 FTCDO95954 541 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 PLCG1P19174 1290 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 PCDHB6Q9Y5E3 794 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 GAP43P17677 238 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 THOC5Q13769 683 aaKnown RBP12.14□□□□□ -0.47
LINC00346-201ENST00000538077 TMED2Q15363 201 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 TRIM68Q6AZZ1 485 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 PASD1Q8IV76 773 aa12.14□□□□□ -0.47
LINC00346-201ENST00000538077 MYO1FO00160 1098 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 NVLO15381 856 aaKnown RBP12.13□□□□□ -0.47
LINC00346-201ENST00000538077 RCN2Q14257 317 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 BBS5Q8N3I7 341 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 DHX36Q9H2U1 1008 aaKnown RBP12.13□□□□□ -0.47
LINC00346-201ENST00000538077 G3BP2Q9UN86 482 aaKnown RBP12.13□□□□□ -0.47
LINC00346-201ENST00000538077 MMP1P03956 469 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 H2AFZP0C0S5 128 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 NSUN2Q08J23 767 aaKnown RBP eCLIP12.13□□□□□ -0.47
LINC00346-201ENST00000538077 SMAD1Q15797 465 aaKnown RBP12.13□□□□□ -0.47
LINC00346-201ENST00000538077 KCTD16Q68DU8 428 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 SNRNP48Q6IEG0 339 aaKnown RBP12.13□□□□□ -0.47
LINC00346-201ENST00000538077 DNAJC24Q6P3W2 148 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 H2AFVQ71UI9 128 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 MAP7D3Q8IWC1 876 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 P2RX5Q93086 422 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 DDX27Q96GQ7 796 aaKnown RBP12.13□□□□□ -0.47
LINC00346-201ENST00000538077 BSDC1Q9NW68 430 aaPredicted RBP12.13□□□□□ -0.47
LINC00346-201ENST00000538077 TUBBP07437 444 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 HABP4Q5JVS0 413 aaKnown RBP12.13□□□□□ -0.47
LINC00346-201ENST00000538077 CATSPER4Q7RTX7 472 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 FOXP1Q9H334 677 aaPredicted RBP12.13□□□□□ -0.47
LINC00346-201ENST00000538077 FEZ2Q9UHY8 353 aaPredicted RBP12.13□□□□□ -0.47
LINC00346-201ENST00000538077 SPHKAPQ2M3C7 1700 aa12.13□□□□□ -0.47
LINC00346-201ENST00000538077 MED7O43513 233 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms