RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 GFPT1Q06210 699 aaPredicted RBP13.39□□□□□ -0.27
CPSF7-218ENST00000537641 PDE4CQ08493 712 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 KCNMA1Q12791 1236 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 NAB2Q15742 525 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 TMEM119Q4V9L6 283 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 SLC27A3Q5K4L6 730 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 MEI1Q5TIA1 1274 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 ZNF444Q8N0Y2 327 aaPredicted RBP13.39□□□□□ -0.27
CPSF7-218ENST00000537641 ARFGAP2Q8N6H7 521 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 PRPF38AQ8NAV1 312 aaKnown RBP13.39□□□□□ -0.27
CPSF7-218ENST00000537641 RAD54LQ92698 747 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 HPS3Q969F9 1004 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 CEP63Q96MT8 703 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 INPP4AQ96PE3 977 aaPredicted RBP13.39□□□□□ -0.27
CPSF7-218ENST00000537641 MTMR9Q96QG7 549 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 ZNF287Q9HBT7 754 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 ATP8B3O60423 1300 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 SNED1Q8TER0 1413 aa13.39□□□□□ -0.27
CPSF7-218ENST00000537641 MYH7BA7E2Y1 1941 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 BRWD3Q6RI45 1802 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 USP17L3A6NCW0 530 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 USP17L4A6NCW7 530 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 KLRF2D3W0D1 207 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 MEFVO15553 781 aaPredicted RBP13.38□□□□□ -0.27
CPSF7-218ENST00000537641 UFL1O94874 794 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 GNA14O95837 355 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 SERPINB2P05120 415 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 GLI1P08151 1106 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 MYBP10242 640 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 IL1R1P14778 569 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 NR1D1P20393 614 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 LSP1P33241 339 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 CARSP49589 748 aaKnown RBP13.38□□□□□ -0.27
CPSF7-218ENST00000537641 PDIA5Q14554 519 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 DIXDC1Q155Q3 683 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 CALCRLQ16602 461 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 ZCWPW2Q504Y3 356 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 USP17L1Q7RTZ2 530 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 SLC51AQ86UW1 340 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 TBCKQ8TEA7 893 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 ATP6V1G3Q96LB4 118 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 PSMB7Q99436 277 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 RTFDC1Q9BY42 306 aaPredicted RBP13.38□□□□□ -0.27
CPSF7-218ENST00000537641 EPB41L5Q9HCM4 733 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 SEC63Q9UGP8 760 aaKnown RBP13.38□□□□□ -0.27
CPSF7-218ENST00000537641 GGA1Q9UJY5 639 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 NFU1Q9UMS0 254 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 ATP6V0A2Q9Y487 856 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 COL4A3BPQ9Y5P4 624 aa13.38□□□□□ -0.27
CPSF7-218ENST00000537641 ZNF233A6NK53 670 aa13.37□□□□□ -0.27
CPSF7-218ENST00000537641 BUB1O43683 1085 aa13.37□□□□□ -0.27
CPSF7-218ENST00000537641 PALMO75781 387 aa13.37□□□□□ -0.27
CPSF7-218ENST00000537641 PPP1R37O75864 691 aa13.37□□□□□ -0.27
CPSF7-218ENST00000537641 BBOX1O75936 387 aa13.37□□□□□ -0.27
CPSF7-218ENST00000537641 HNRNPH1P31943 449 aaKnown RBP13.37□□□□□ -0.27
CPSF7-218ENST00000537641 FNTAP49354 379 aa13.37□□□□□ -0.27
CPSF7-218ENST00000537641 NAP1L1P55209 391 aaKnown RBP13.37□□□□□ -0.27
CPSF7-218ENST00000537641 MARSP56192 900 aaKnown RBP13.37□□□□□ -0.27
CPSF7-218ENST00000537641 FKBP3Q00688 224 aaKnown RBP13.37□□□□□ -0.27
CPSF7-218ENST00000537641 GUCY2DQ02846 1103 aa13.37□□□□□ -0.27
CPSF7-218ENST00000537641 PLCB4Q15147 1175 aa13.37□□□□□ -0.27
CPSF7-218ENST00000537641 GRIK5Q16478 980 aa13.37□□□□□ -0.27
CPSF7-218ENST00000537641 CDC37Q16543 378 aaPredicted RBP13.37□□□□□ -0.27
CPSF7-218ENST00000537641 SLC18A3Q16572 532 aa13.37□□□□□ -0.27
CPSF7-218ENST00000537641 PTGISQ16647 500 aa13.37□□□□□ -0.27
CPSF7-218ENST00000537641 C10orf76Q5T2E6 689 aa13.37□□□□□ -0.27
CPSF7-218ENST00000537641 CCDC91Q7Z6B0 441 aa13.37□□□□□ -0.27
CPSF7-218ENST00000537641 MYOCDQ8IZQ8 938 aa13.37□□□□□ -0.27
CPSF7-218ENST00000537641 REXO1Q8N1G1 1221 aaKnown RBP13.37□□□□□ -0.27
CPSF7-218ENST00000537641 C3orf20Q8ND61 904 aa13.37□□□□□ -0.27
CPSF7-218ENST00000537641 CASKIN2Q8WXE0 1202 aa13.37□□□□□ -0.27
CPSF7-218ENST00000537641 PIK3R5Q8WYR1 880 aa13.37□□□□□ -0.27
CPSF7-218ENST00000537641 DYNLL2Q96FJ2 89 aa13.37□□□□□ -0.27
CPSF7-218ENST00000537641 RNPC3Q96LT9 517 aaKnown RBP13.37□□□□□ -0.27
CPSF7-218ENST00000537641 CD209Q9NNX6 404 aa13.37□□□□□ -0.27
CPSF7-218ENST00000537641 PLCB1Q9NQ66 1216 aa13.37□□□□□ -0.27
CPSF7-218ENST00000537641 SAMM50Q9Y512 469 aa13.37□□□□□ -0.27
CPSF7-218ENST00000537641 RASA1P20936 1047 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 HOXA10P31260 410 aaPredicted RBP13.36□□□□□ -0.27
CPSF7-218ENST00000537641 MRPS25P82663 173 aaKnown RBP13.36□□□□□ -0.27
CPSF7-218ENST00000537641 DRP2Q13474 957 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 SKIDA1Q1XH10 827 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 CCDC40Q4G0X9 1142 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 NAA35Q5VZE5 725 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 PPP4R3AQ6IN85 833 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 PLCD3Q8N3E9 789 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 SH2D3CQ8N5H7 860 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 OTUD6BQ8N6M0 293 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 ANKRD13CQ8N6S4 541 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 ZNF473Q8WTR7 871 aaKnown RBP13.36□□□□□ -0.27
CPSF7-218ENST00000537641 TGFBRAP1Q8WUH2 860 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 MS4A14Q96JA4 679 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 NCAPGQ9BPX3 1015 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 HINFPQ9BQA5 517 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 LSM14BQ9BX40 385 aaKnown RBP13.36□□□□□ -0.27
CPSF7-218ENST00000537641 TANGO6Q9C0B7 1094 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 GPR75-ASB3A0A0A6YYF3 556 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 SLC26A4O43511 780 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 KRT14P02533 472 aa13.36□□□□□ -0.27
CPSF7-218ENST00000537641 FAM153BP0C7A2 387 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms