RNA–Protein interactions for RNA: ENST00000537607.5

CIT-208, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 4,958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-208ENST00000537607 KRT12Q99456 494 aa13.38□□□□□ -0.27
CIT-208ENST00000537607 ZMYND10O75800 440 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 CCND2P30279 289 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 TFAMQ00059 246 aaKnown RBP13.37□□□□□ -0.27
CIT-208ENST00000537607 SPOUT1Q5T280 376 aaKnown RBP13.37□□□□□ -0.27
CIT-208ENST00000537607 SGMS1Q86VZ5 419 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 SLC17A8Q8NDX2 589 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 RABGGTAQ92696 567 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 ZNF653Q96CK0 615 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 ODF2LQ9ULJ1 636 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 ATP1A2P50993 1020 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 TCP11X2Q5H9J9 407 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 TMED8Q6PL24 325 aaPredicted RBP13.37□□□□□ -0.27
CIT-208ENST00000537607 NSMCE1Q8WV22 266 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 JPH2Q9BR39 696 aaPredicted RBP13.37□□□□□ -0.27
CIT-208ENST00000537607 MKRN3Q13064 507 aaKnown RBP13.37□□□□□ -0.27
CIT-208ENST00000537607 PALM2Q8IXS6 379 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 TBC1D31Q96DN5 1066 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 TMEM260Q9NX78 707 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 CPS1P31327 1500 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 SYNJ2BP-COX16A0A087WUM0 186 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 NDUFA10O95299 355 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 ABL1P00519 1130 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 OSTNP61366 133 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 LRRC63Q05C16 580 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 AP3B2Q13367 1082 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 NKX1-1Q15270 411 aaPredicted RBP13.37□□□□□ -0.27
CIT-208ENST00000537607 TSGA10IPQ3SY00 556 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 DCAF4Q8WV16 495 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 MAGOHBQ96A72 148 aaKnown RBP13.37□□□□□ -0.27
CIT-208ENST00000537607 PLCB1Q9NQ66 1216 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 COX16Q9P0S2 106 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 NUB1Q9Y5A7 615 aa13.37□□□□□ -0.27
CIT-208ENST00000537607 GOLGA8IPA6NC78 632 aa13.36□□□□□ -0.27
CIT-208ENST00000537607 TRIM49BA6NDI0 452 aa13.36□□□□□ -0.27
CIT-208ENST00000537607 GOLGA8JA6NMD2 632 aa13.36□□□□□ -0.27
CIT-208ENST00000537607 F5H6K3 240 aa13.36□□□□□ -0.27
CIT-208ENST00000537607 ZBTB7AO95365 584 aa13.36□□□□□ -0.27
CIT-208ENST00000537607 FTCDO95954 541 aa13.36□□□□□ -0.27
CIT-208ENST00000537607 INPP5BP32019 993 aa13.36□□□□□ -0.27
CIT-208ENST00000537607 KLRC3Q07444 240 aa13.36□□□□□ -0.27
CIT-208ENST00000537607 PPP2R5CQ13362 524 aa13.36□□□□□ -0.27
CIT-208ENST00000537607 RNF207Q6ZRF8 634 aa13.36□□□□□ -0.27
CIT-208ENST00000537607 TRIM50Q86XT4 487 aa13.36□□□□□ -0.27
CIT-208ENST00000537607 UBE2TQ9NPD8 197 aaPredicted RBP13.36□□□□□ -0.27
CIT-208ENST00000537607 NXF1Q9UBU9 619 aaKnown RBP13.36□□□□□ -0.27
CIT-208ENST00000537607 OSBPP22059 807 aa13.36□□□□□ -0.27
CIT-208ENST00000537607 MAN1A1P33908 653 aa13.36□□□□□ -0.27
CIT-208ENST00000537607 RCAN1P53805 252 aa13.36□□□□□ -0.27
CIT-208ENST00000537607 BFSP1Q12934 665 aa13.36□□□□□ -0.27
CIT-208ENST00000537607 TTC31Q49AM3 519 aaPredicted RBP13.36□□□□□ -0.27
CIT-208ENST00000537607 ZNF579Q8NAF0 562 aaKnown RBP13.36□□□□□ -0.27
CIT-208ENST00000537607 ADAMTS1Q9UHI8 967 aa13.36□□□□□ -0.27
CIT-208ENST00000537607 PTPRUQ92729 1446 aa13.36□□□□□ -0.27
CIT-208ENST00000537607 SMAP1Q8IYB5 467 aaPredicted RBP13.36□□□□□ -0.27
CIT-208ENST00000537607 GABPB2Q8TAK5 448 aaPredicted RBP13.36□□□□□ -0.27
CIT-208ENST00000537607 GRK7Q8WTQ7 553 aa13.36□□□□□ -0.27
CIT-208ENST00000537607 PLA2G12BQ9BX93 195 aa13.36□□□□□ -0.27
CIT-208ENST00000537607 NHEJ1Q9H9Q4 299 aaPredicted RBP13.36□□□□□ -0.27
CIT-208ENST00000537607 ZNF277Q9NRM2 450 aaPredicted RBP13.36□□□□□ -0.27
CIT-208ENST00000537607 PPRC1Q5VV67 1664 aaKnown RBP13.36□□□□□ -0.27
CIT-208ENST00000537607 GRM4Q14833 912 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 NSUN4Q96CB9 384 aaKnown RBP13.35□□□□□ -0.27
CIT-208ENST00000537607 PNPLA7Q6ZV29 1317 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 PALM3A6NDB9 673 aaPredicted RBP13.35□□□□□ -0.27
CIT-208ENST00000537607 PP2D1A8MPX8 630 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 E9PMD0 336 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 THAP12O43422 761 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 STX2P32856 288 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 PEX3P56589 373 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 STAG2Q8N3U4 1231 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 PPP1R16BQ96T49 567 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 MIS12Q9H081 205 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 MYO3AQ8NEV4 1616 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 KIF28PB7ZC32 967 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 GOLGA8SH3BPF8 625 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 GUCY1A2P33402 732 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 ARHGAP4P98171 946 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 EXOSC10Q01780 885 aaKnown RBP13.35□□□□□ -0.27
CIT-208ENST00000537607 UNC13DQ70J99 1090 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 ZNF34Q8IZ26 560 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 RMDN3Q96TC7 470 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 PTPN22Q9Y2R2 807 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 MOCS3O95396 460 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 AKR1B1P15121 316 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 GABPAQ06546 454 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 QRICH1Q2TAL8 776 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 ZBTB33Q86T24 672 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 KSR1Q8IVT5 923 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 MARCH10Q8NA82 808 aaPredicted RBP13.35□□□□□ -0.27
CIT-208ENST00000537607 NEDD1Q8NHV4 660 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 FAM149B1Q96BN6 582 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 ZHX2Q9Y6X8 837 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 ZNF609O15014 1411 aa13.35□□□□□ -0.27
CIT-208ENST00000537607 TLR3O15455 904 aaKnown RBP13.34□□□□□ -0.27
CIT-208ENST00000537607 CRCPO75575 148 aa13.34□□□□□ -0.27
CIT-208ENST00000537607 PSAPP07602 524 aa13.34□□□□□ -0.27
CIT-208ENST00000537607 IREB2P48200 963 aaKnown RBP13.34□□□□□ -0.27
CIT-208ENST00000537607 ZNF131P52739 623 aa13.34□□□□□ -0.27
CIT-208ENST00000537607 SLC27A3Q5K4L6 730 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms