RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 PKN1Q16512 942 aa20.46■□□□□ 0.87
TNFRSF1A-209ENST00000536717 PTGISQ16647 500 aa20.46■□□□□ 0.87
TNFRSF1A-209ENST00000536717 NLRX1Q86UT6 975 aa20.46■□□□□ 0.87
TNFRSF1A-209ENST00000536717 TEX2Q8IWB9 1127 aa20.46■□□□□ 0.87
TNFRSF1A-209ENST00000536717 PGBD1Q96JS3 809 aa20.46■□□□□ 0.87
TNFRSF1A-209ENST00000536717 PRPF3O43395 683 aaKnown RBP20.45■□□□□ 0.86
TNFRSF1A-209ENST00000536717 ATP9AO75110 1047 aa20.45■□□□□ 0.86
TNFRSF1A-209ENST00000536717 LGALS2P05162 132 aa20.45■□□□□ 0.86
TNFRSF1A-209ENST00000536717 CLK2P49760 499 aaKnown RBP20.45■□□□□ 0.86
TNFRSF1A-209ENST00000536717 FAM109BQ6ICB4 259 aaPredicted RBP20.45■□□□□ 0.86
TNFRSF1A-209ENST00000536717 PHKBQ93100 1093 aa20.45■□□□□ 0.86
TNFRSF1A-209ENST00000536717 GPR20Q99678 358 aa20.45■□□□□ 0.86
TNFRSF1A-209ENST00000536717 NCOA5Q9HCD5 579 aaKnown RBP20.45■□□□□ 0.86
TNFRSF1A-209ENST00000536717 MTMR10Q9NXD2 777 aa20.45■□□□□ 0.86
TNFRSF1A-209ENST00000536717 PITPNM1O00562 1244 aa20.44■□□□□ 0.86
TNFRSF1A-209ENST00000536717 NOP56O00567 594 aaKnown RBP20.44■□□□□ 0.86
TNFRSF1A-209ENST00000536717 KCNA2P16389 499 aa20.44■□□□□ 0.86
TNFRSF1A-209ENST00000536717 CCT2P78371 535 aaKnown RBP20.44■□□□□ 0.86
TNFRSF1A-209ENST00000536717 C7orf31Q8N865 590 aa20.44■□□□□ 0.86
TNFRSF1A-209ENST00000536717 ANO3Q9BYT9 981 aa20.44■□□□□ 0.86
TNFRSF1A-209ENST00000536717 NOD1Q9Y239 953 aa20.44■□□□□ 0.86
TNFRSF1A-209ENST00000536717 PPFIA3O75145 1194 aa20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 FOSP01100 380 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 HIC1Q14526 733 aa20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 HERVK_113Q902F9 699 aa20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 DHX38Q92620 1227 aaKnown RBP20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 CDHR1Q96JP9 859 aa20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 LARP6Q9BRS8 491 aaKnown RBP20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 EHMT1Q9H9B1 1298 aa20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 JADE2Q9NQC1 790 aa20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 TMEM260Q9NX78 707 aa20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 CXXC1Q9P0U4 656 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 H3BRB1 525 aa20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 ADAMTS3O15072 1205 aa20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 FGBP02675 491 aa20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 IQCF3P0C7M6 154 aa20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 IFNAR1P17181 557 aa20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 AP3B2Q13367 1082 aa20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 BFSP2Q13515 415 aa20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 MTMR1Q13613 665 aa20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 RPUSD2Q8IZ73 545 aaKnown RBP20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 RNF26Q9BY78 433 aaPredicted RBP20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 ZMYND12Q9H0C1 365 aa20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 GLT8D2Q9H1C3 349 aa20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 TUT1Q9H6E5 874 aaKnown RBP20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 PDRG1Q9NUG6 133 aa20.43■□□□□ 0.86
TNFRSF1A-209ENST00000536717 WDR81Q562E7 1941 aa20.42■□□□□ 0.86
TNFRSF1A-209ENST00000536717 EYSQ5T1H1 3165 aa20.42■□□□□ 0.86
TNFRSF1A-209ENST00000536717 PTPRSQ13332 1948 aa20.42■□□□□ 0.86
TNFRSF1A-209ENST00000536717 ESYT2A0FGR8 921 aa20.42■□□□□ 0.86
TNFRSF1A-209ENST00000536717 ZNF200P98182 395 aaPredicted RBP20.42■□□□□ 0.86
TNFRSF1A-209ENST00000536717 SP4Q02446 784 aa20.42■□□□□ 0.86
TNFRSF1A-209ENST00000536717 OTOP2Q7RTS6 562 aa20.42■□□□□ 0.86
TNFRSF1A-209ENST00000536717 GIMAP8Q8ND71 665 aaPredicted RBP20.42■□□□□ 0.86
TNFRSF1A-209ENST00000536717 CYP2W1Q8TAV3 490 aa20.42■□□□□ 0.86
TNFRSF1A-209ENST00000536717 CAGE1Q8TC20 777 aa20.42■□□□□ 0.86
TNFRSF1A-209ENST00000536717 MXRA8Q9BRK3 442 aa20.42■□□□□ 0.86
TNFRSF1A-209ENST00000536717 MAFGO15525 162 aa20.41■□□□□ 0.86
TNFRSF1A-209ENST00000536717 SREBF1P36956 1147 aa20.41■□□□□ 0.86
TNFRSF1A-209ENST00000536717 ZNF697Q5TEC3 545 aa20.41■□□□□ 0.86
TNFRSF1A-209ENST00000536717 TRIM50Q86XT4 487 aa20.41■□□□□ 0.86
TNFRSF1A-209ENST00000536717 RETREG2Q8NC44 543 aa20.41■□□□□ 0.86
TNFRSF1A-209ENST00000536717 ZNF274Q96GC6 653 aaPredicted RBP20.41■□□□□ 0.86
TNFRSF1A-209ENST00000536717 FAM161BQ96MY7 647 aa20.41■□□□□ 0.86
TNFRSF1A-209ENST00000536717 KIF2CQ99661 725 aa20.41■□□□□ 0.86
TNFRSF1A-209ENST00000536717 SLC26A6Q9BXS9 759 aa20.41■□□□□ 0.86
TNFRSF1A-209ENST00000536717 GRXCR1A8MXD5 290 aa20.4■□□□□ 0.86
TNFRSF1A-209ENST00000536717 HOXC8P31273 242 aa20.4■□□□□ 0.86
TNFRSF1A-209ENST00000536717 NEK4P51957 841 aa20.4■□□□□ 0.86
TNFRSF1A-209ENST00000536717 AKAP17AQ02040 695 aaKnown RBP20.4■□□□□ 0.86
TNFRSF1A-209ENST00000536717 RBL2Q08999 1139 aa20.4■□□□□ 0.86
TNFRSF1A-209ENST00000536717 JAKMIP3Q5VZ66 844 aa20.4■□□□□ 0.86
TNFRSF1A-209ENST00000536717 DEFB128Q7Z7B8 93 aa20.4■□□□□ 0.86
TNFRSF1A-209ENST00000536717 WNT8BQ93098 351 aa20.4■□□□□ 0.86
TNFRSF1A-209ENST00000536717 TTYH1Q9H313 450 aaPredicted RBP20.4■□□□□ 0.86
TNFRSF1A-209ENST00000536717 KCNH7Q9NS40 1196 aa20.4■□□□□ 0.86
TNFRSF1A-209ENST00000536717 PKD2L1Q9P0L9 805 aa20.4■□□□□ 0.86
TNFRSF1A-209ENST00000536717 MYH9P35579 1960 aaKnown RBP20.4■□□□□ 0.86
TNFRSF1A-209ENST00000536717 PFKMP08237 780 aa20.39■□□□□ 0.85
TNFRSF1A-209ENST00000536717 RFC2P35250 354 aa20.39■□□□□ 0.85
TNFRSF1A-209ENST00000536717 PTK7Q13308 1070 aa20.39■□□□□ 0.85
TNFRSF1A-209ENST00000536717 RABEP1Q15276 862 aa20.39■□□□□ 0.85
TNFRSF1A-209ENST00000536717 TRIM71Q2Q1W2 868 aaKnown RBP20.39■□□□□ 0.85
TNFRSF1A-209ENST00000536717 CEP55Q53EZ4 464 aa20.39■□□□□ 0.85
TNFRSF1A-209ENST00000536717 CCDC155Q8N6L0 562 aa20.39■□□□□ 0.85
TNFRSF1A-209ENST00000536717 AFAP1L1Q8TED9 768 aa20.39■□□□□ 0.85
TNFRSF1A-209ENST00000536717 CCDC12Q8WUD4 166 aaPredicted RBP20.39■□□□□ 0.85
TNFRSF1A-209ENST00000536717 CRYGNQ8WXF5 182 aa20.39■□□□□ 0.85
TNFRSF1A-209ENST00000536717 GUCD1Q96NT3 240 aa20.39■□□□□ 0.85
TNFRSF1A-209ENST00000536717 CHD9Q3L8U1 2897 aa20.39■□□□□ 0.85
TNFRSF1A-209ENST00000536717 GSTTP1A0A1W2PQM5 241 aa20.38■□□□□ 0.85
TNFRSF1A-209ENST00000536717 SMIM10L2AP0DMW4 78 aa20.38■□□□□ 0.85
TNFRSF1A-209ENST00000536717 SMIM10L2BP0DMW5 78 aa20.38■□□□□ 0.85
TNFRSF1A-209ENST00000536717 CKBP12277 381 aa20.38■□□□□ 0.85
TNFRSF1A-209ENST00000536717 DNAJB2P25686 324 aa20.38■□□□□ 0.85
TNFRSF1A-209ENST00000536717 TCF7P36402 384 aaPredicted RBP20.38■□□□□ 0.85
TNFRSF1A-209ENST00000536717 ARHGAP4P98171 946 aa20.38■□□□□ 0.85
TNFRSF1A-209ENST00000536717 GPNMBQ14956 572 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms