RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 CRYGNQ8WXF5 182 aa15.05■□□□□ -0
PRKDC-206ENST00000536429 KIF2CQ99661 725 aa15.05■□□□□ -0
PRKDC-206ENST00000536429 GPR20Q99678 358 aa15.05■□□□□ -0
PRKDC-206ENST00000536429 SENP7Q9BQF6 1050 aa15.05■□□□□ -0
PRKDC-206ENST00000536429 MXRA8Q9BRK3 442 aa15.05■□□□□ -0
PRKDC-206ENST00000536429 ALG1Q9BT22 464 aa15.05■□□□□ -0
PRKDC-206ENST00000536429 WNT8AQ9H1J5 351 aa15.05■□□□□ -0
PRKDC-206ENST00000536429 SLKQ9H2G2 1235 aaPredicted RBP15.05■□□□□ -0
PRKDC-206ENST00000536429 HIPK3Q9H422 1215 aa15.05■□□□□ -0
PRKDC-206ENST00000536429 C6orf50Q9HD87 102 aa15.05■□□□□ -0
PRKDC-206ENST00000536429 EDIL3O43854 480 aa15.04■□□□□ -0
PRKDC-206ENST00000536429 PPFIA4O75335 1185 aa15.04■□□□□ -0
PRKDC-206ENST00000536429 LGALS2P05162 132 aa15.04■□□□□ -0
PRKDC-206ENST00000536429 CSF2RAP15509 400 aa15.04■□□□□ -0
PRKDC-206ENST00000536429 CCL23P55773 120 aa15.04■□□□□ -0
PRKDC-206ENST00000536429 ARHGAP4P98171 946 aa15.04■□□□□ -0
PRKDC-206ENST00000536429 ZNF200P98182 395 aaPredicted RBP15.04■□□□□ -0
PRKDC-206ENST00000536429 ST3GAL1Q11201 340 aa15.04■□□□□ -0
PRKDC-206ENST00000536429 KIAA0753Q2KHM9 967 aa15.04■□□□□ -0
PRKDC-206ENST00000536429 C16orf59Q7L2K0 433 aa15.04■□□□□ -0
PRKDC-206ENST00000536429 TRIM22Q8IYM9 498 aa15.04■□□□□ -0
PRKDC-206ENST00000536429 REXO1Q8N1G1 1221 aaKnown RBP15.04■□□□□ -0
PRKDC-206ENST00000536429 CCDC12Q8WUD4 166 aaPredicted RBP15.04■□□□□ -0
PRKDC-206ENST00000536429 UIMC1Q96RL1 719 aa15.04■□□□□ -0
PRKDC-206ENST00000536429 SEZ6LQ9BYH1 1024 aa15.04■□□□□ -0
PRKDC-206ENST00000536429 GLT8D2Q9H1C3 349 aa15.04■□□□□ -0
PRKDC-206ENST00000536429 EHMT1Q9H9B1 1298 aa15.04■□□□□ -0
PRKDC-206ENST00000536429 HDAC6Q9UBN7 1215 aa15.04■□□□□ -0
PRKDC-206ENST00000536429 FAM86B1E9PN63 330 aa15.03■□□□□ -0
PRKDC-206ENST00000536429 NOP56O00567 594 aaKnown RBP15.03■□□□□ -0
PRKDC-206ENST00000536429 EIF5BO60841 1220 aaKnown RBP15.03■□□□□ -0
PRKDC-206ENST00000536429 DEXIO95424 95 aa15.03■□□□□ -0
PRKDC-206ENST00000536429 FAM86B2P0C5J1 330 aa15.03■□□□□ -0
PRKDC-206ENST00000536429 ACRP10323 421 aa15.03■□□□□ -0
PRKDC-206ENST00000536429 ITGB3BPQ13352 177 aaPredicted RBP15.03■□□□□ -0
PRKDC-206ENST00000536429 ANKRD1Q15327 319 aa15.03■□□□□ -0
PRKDC-206ENST00000536429 NPY5RQ15761 445 aa15.03■□□□□ -0
PRKDC-206ENST00000536429 CEP55Q53EZ4 464 aa15.03■□□□□ -0
PRKDC-206ENST00000536429 UTP14CQ5TAP6 766 aaKnown RBP15.03■□□□□ -0
PRKDC-206ENST00000536429 SESTD1Q86VW0 696 aa15.03■□□□□ -0
PRKDC-206ENST00000536429 TEX2Q8IWB9 1127 aa15.03■□□□□ -0
PRKDC-206ENST00000536429 CCDC148Q8NFR7 591 aa15.03■□□□□ -0
PRKDC-206ENST00000536429 VWCEQ96DN2 955 aa15.03■□□□□ -0
PRKDC-206ENST00000536429 SCLYQ96I15 445 aa15.03■□□□□ -0
PRKDC-206ENST00000536429 KCNH7Q9NS40 1196 aa15.03■□□□□ -0
PRKDC-206ENST00000536429 GJB4Q9NTQ9 266 aa15.03■□□□□ -0
PRKDC-206ENST00000536429 GSTTP1A0A1W2PQM5 241 aa15.02■□□□□ -0
PRKDC-206ENST00000536429 MEIS1O00470 390 aa15.02■□□□□ -0
PRKDC-206ENST00000536429 GNA11P29992 359 aa15.02■□□□□ -0
PRKDC-206ENST00000536429 NLRP5P59047 1200 aa15.02■□□□□ -0
PRKDC-206ENST00000536429 PTPN11Q06124 597 aaPredicted RBP15.02■□□□□ -0
PRKDC-206ENST00000536429 PTGISQ16647 500 aa15.02■□□□□ -0
PRKDC-206ENST00000536429 LRIT3Q3SXY7 679 aa15.02■□□□□ -0
PRKDC-206ENST00000536429 CPLX2Q6PUV4 134 aaKnown RBP15.02■□□□□ -0
PRKDC-206ENST00000536429 C7orf31Q8N865 590 aa15.02■□□□□ -0
PRKDC-206ENST00000536429 DHX38Q92620 1227 aaKnown RBP15.02■□□□□ -0
PRKDC-206ENST00000536429 WNT8BQ93098 351 aa15.02■□□□□ -0
PRKDC-206ENST00000536429 GTF3C6Q969F1 213 aa15.02■□□□□ -0
PRKDC-206ENST00000536429 CDHR1Q96JP9 859 aa15.02■□□□□ -0
PRKDC-206ENST00000536429 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.02■□□□□ -0
PRKDC-206ENST00000536429 AGO4Q9HCK5 861 aaKnown RBP15.02■□□□□ -0
PRKDC-206ENST00000536429 SH3GLB2Q9NR46 395 aa15.02■□□□□ -0
PRKDC-206ENST00000536429 GTF2IRD1Q9UHL9 959 aa15.02■□□□□ -0
PRKDC-206ENST00000536429 KCNJ14Q9UNX9 436 aa15.02■□□□□ -0
PRKDC-206ENST00000536429 IGLV3-22A0A075B6J6 115 aa15.01□□□□□ -0.01
PRKDC-206ENST00000536429 H3BRB1 525 aa15.01□□□□□ -0.01
PRKDC-206ENST00000536429 CYP3A4P08684 503 aa15.01□□□□□ -0.01
PRKDC-206ENST00000536429 SUPT20HL2P0C7V6 817 aa15.01□□□□□ -0.01
PRKDC-206ENST00000536429 FDPSP14324 419 aaKnown RBP15.01□□□□□ -0.01
PRKDC-206ENST00000536429 ZNF76P36508 570 aa15.01□□□□□ -0.01
PRKDC-206ENST00000536429 TMEM199Q8N511 208 aa15.01□□□□□ -0.01
PRKDC-206ENST00000536429 KATNAL1Q9BW62 490 aa15.01□□□□□ -0.01
PRKDC-206ENST00000536429 C22orf23Q9BZE7 217 aa15.01□□□□□ -0.01
PRKDC-206ENST00000536429 TUT1Q9H6E5 874 aaKnown RBP15.01□□□□□ -0.01
PRKDC-206ENST00000536429 PCDHA4Q9UN74 947 aa15.01□□□□□ -0.01
PRKDC-206ENST00000536429 STK36Q9NRP7 1315 aa15□□□□□ -0.01
PRKDC-206ENST00000536429 M0R2N6 131 aa15□□□□□ -0.01
PRKDC-206ENST00000536429 MAFGO15525 162 aa15□□□□□ -0.01
PRKDC-206ENST00000536429 JAK2O60674 1132 aa15□□□□□ -0.01
PRKDC-206ENST00000536429 CDKL5O76039 1030 aa15□□□□□ -0.01
PRKDC-206ENST00000536429 SLC34A2O95436 690 aa15□□□□□ -0.01
PRKDC-206ENST00000536429 SMIM10L2AP0DMW4 78 aa15□□□□□ -0.01
PRKDC-206ENST00000536429 SMIM10L2BP0DMW5 78 aa15□□□□□ -0.01
PRKDC-206ENST00000536429 TCF7P36402 384 aaPredicted RBP15□□□□□ -0.01
PRKDC-206ENST00000536429 PPIGQ13427 754 aaKnown RBP eCLIP15□□□□□ -0.01
PRKDC-206ENST00000536429 TMEM240Q5SV17 173 aa15□□□□□ -0.01
PRKDC-206ENST00000536429 PLA2G4DQ86XP0 818 aa15□□□□□ -0.01
PRKDC-206ENST00000536429 GIMAP8Q8ND71 665 aaPredicted RBP15□□□□□ -0.01
PRKDC-206ENST00000536429 BICD2Q8TD16 824 aa15□□□□□ -0.01
PRKDC-206ENST00000536429 PCYT2Q99447 389 aa15□□□□□ -0.01
PRKDC-206ENST00000536429 JPH1Q9HDC5 661 aaPredicted RBP15□□□□□ -0.01
PRKDC-206ENST00000536429 NOD1Q9Y239 953 aa15□□□□□ -0.01
PRKDC-206ENST00000536429 DDX39AO00148 427 aaKnown RBP14.99□□□□□ -0.01
PRKDC-206ENST00000536429 TRIM71Q2Q1W2 868 aaKnown RBP14.99□□□□□ -0.01
PRKDC-206ENST00000536429 ZNF365Q70YC5 407 aa14.99□□□□□ -0.01
PRKDC-206ENST00000536429 BLIDQ8IZY5 108 aa14.99□□□□□ -0.01
PRKDC-206ENST00000536429 NSUN7Q8NE18 718 aaKnown RBP14.99□□□□□ -0.01
PRKDC-206ENST00000536429 SEPT1Q8WYJ6 367 aa14.99□□□□□ -0.01
PRKDC-206ENST00000536429 LENG9Q96B70 501 aa14.99□□□□□ -0.01
PRKDC-206ENST00000536429 RNPC3Q96LT9 517 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms