RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 UTP14CQ5TAP6 766 aaKnown RBP16.4■□□□□ 0.22
RTN3P1-201ENST00000536295 TRIM50Q86XT4 487 aa16.4■□□□□ 0.22
RTN3P1-201ENST00000536295 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.4■□□□□ 0.22
RTN3P1-201ENST00000536295 WNT8BQ93098 351 aa16.4■□□□□ 0.22
RTN3P1-201ENST00000536295 GPR20Q99678 358 aa16.4■□□□□ 0.22
RTN3P1-201ENST00000536295 PKD2L1Q9P0L9 805 aa16.4■□□□□ 0.22
RTN3P1-201ENST00000536295 PCDHA6Q9UN73 950 aa16.4■□□□□ 0.22
RTN3P1-201ENST00000536295 PCDHA8Q9Y5H6 950 aa16.4■□□□□ 0.22
RTN3P1-201ENST00000536295 SNX14Q9Y5W7 946 aa16.4■□□□□ 0.22
RTN3P1-201ENST00000536295 V9GY48 417 aaPredicted RBP16.4■□□□□ 0.22
RTN3P1-201ENST00000536295 C17orf102A2RUQ5 167 aa16.39■□□□□ 0.21
RTN3P1-201ENST00000536295 DLL1O00548 723 aa16.39■□□□□ 0.21
RTN3P1-201ENST00000536295 SMIM10L2AP0DMW4 78 aa16.39■□□□□ 0.21
RTN3P1-201ENST00000536295 SMIM10L2BP0DMW5 78 aa16.39■□□□□ 0.21
RTN3P1-201ENST00000536295 ITGB5P18084 799 aa16.39■□□□□ 0.21
RTN3P1-201ENST00000536295 CDC27P30260 824 aa16.39■□□□□ 0.21
RTN3P1-201ENST00000536295 HSPA4P34932 840 aa16.39■□□□□ 0.21
RTN3P1-201ENST00000536295 APOBRQ0VD83 1088 aa16.39■□□□□ 0.21
RTN3P1-201ENST00000536295 FUT2Q10981 343 aa16.39■□□□□ 0.21
RTN3P1-201ENST00000536295 GPNMBQ14956 572 aa16.39■□□□□ 0.21
RTN3P1-201ENST00000536295 PPP2R2DQ66LE6 453 aa16.39■□□□□ 0.21
RTN3P1-201ENST00000536295 TYW1BQ6NUM6 668 aa16.39■□□□□ 0.21
RTN3P1-201ENST00000536295 Q6ZUG5 572 aa16.39■□□□□ 0.21
RTN3P1-201ENST00000536295 GPRASP2Q96D09 838 aa16.39■□□□□ 0.21
RTN3P1-201ENST00000536295 GAS2L1Q99501 681 aaPredicted RBP16.39■□□□□ 0.21
RTN3P1-201ENST00000536295 USP26Q9BXU7 913 aa16.39■□□□□ 0.21
RTN3P1-201ENST00000536295 PCDHA11Q9Y5I1 949 aa16.39■□□□□ 0.21
RTN3P1-201ENST00000536295 GBF1Q92538 1859 aa16.39■□□□□ 0.21
RTN3P1-201ENST00000536295 DOCK5Q9H7D0 1870 aa16.39■□□□□ 0.21
RTN3P1-201ENST00000536295 TRIP12Q14669 1992 aaPredicted RBP16.38■□□□□ 0.21
RTN3P1-201ENST00000536295 NBNO60934 754 aa16.38■□□□□ 0.21
RTN3P1-201ENST00000536295 ATP9AO75110 1047 aa16.38■□□□□ 0.21
RTN3P1-201ENST00000536295 METAP2P50579 478 aaKnown RBP eCLIP16.38■□□□□ 0.21
RTN3P1-201ENST00000536295 RBL2Q08999 1139 aa16.38■□□□□ 0.21
RTN3P1-201ENST00000536295 MTMR1Q13613 665 aa16.38■□□□□ 0.21
RTN3P1-201ENST00000536295 TRIM71Q2Q1W2 868 aaKnown RBP16.38■□□□□ 0.21
RTN3P1-201ENST00000536295 ZNF618Q5T7W0 954 aa16.38■□□□□ 0.21
RTN3P1-201ENST00000536295 BLOC1S2Q6QNY1 142 aa16.38■□□□□ 0.21
RTN3P1-201ENST00000536295 KCNB2Q92953 911 aa16.38■□□□□ 0.21
RTN3P1-201ENST00000536295 BRF1Q92994 677 aa16.38■□□□□ 0.21
RTN3P1-201ENST00000536295 ATP6V0A1Q93050 837 aa16.38■□□□□ 0.21
RTN3P1-201ENST00000536295 PGBD1Q96JS3 809 aa16.38■□□□□ 0.21
RTN3P1-201ENST00000536295 SLC9A7Q96T83 725 aa16.38■□□□□ 0.21
RTN3P1-201ENST00000536295 SENP7Q9BQF6 1050 aa16.38■□□□□ 0.21
RTN3P1-201ENST00000536295 EHMT1Q9H9B1 1298 aa16.38■□□□□ 0.21
RTN3P1-201ENST00000536295 FAM217BQ9NTX9 383 aaPredicted RBP16.38■□□□□ 0.21
RTN3P1-201ENST00000536295 STXBP3O00186 592 aa16.37■□□□□ 0.21
RTN3P1-201ENST00000536295 REC8O95072 547 aa16.37■□□□□ 0.21
RTN3P1-201ENST00000536295 KCNA2P16389 499 aa16.37■□□□□ 0.21
RTN3P1-201ENST00000536295 ADD1P35611 737 aaKnown RBP16.37■□□□□ 0.21
RTN3P1-201ENST00000536295 THPOP40225 353 aa16.37■□□□□ 0.21
RTN3P1-201ENST00000536295 KCNJ6P48051 423 aa16.37■□□□□ 0.21
RTN3P1-201ENST00000536295 ADCY7P51828 1080 aa16.37■□□□□ 0.21
RTN3P1-201ENST00000536295 PPP1R18Q6NYC8 613 aa16.37■□□□□ 0.21
RTN3P1-201ENST00000536295 SERINC5Q86VE9 423 aa16.37■□□□□ 0.21
RTN3P1-201ENST00000536295 GIMAP8Q8ND71 665 aaPredicted RBP16.37■□□□□ 0.21
RTN3P1-201ENST00000536295 PPM1EQ8WY54 764 aa16.37■□□□□ 0.21
RTN3P1-201ENST00000536295 CDHR1Q96JP9 859 aa16.37■□□□□ 0.21
RTN3P1-201ENST00000536295 RNPEPQ9H4A4 650 aa16.37■□□□□ 0.21
RTN3P1-201ENST00000536295 RIC8AQ9NPQ8 531 aa16.37■□□□□ 0.21
RTN3P1-201ENST00000536295 SETD4Q9NVD3 440 aa16.37■□□□□ 0.21
RTN3P1-201ENST00000536295 ZNF215Q9UL58 517 aaPredicted RBP16.37■□□□□ 0.21
RTN3P1-201ENST00000536295 UBIAD1Q9Y5Z9 338 aa16.37■□□□□ 0.21
RTN3P1-201ENST00000536295 EYSQ5T1H1 3165 aa16.36■□□□□ 0.21
RTN3P1-201ENST00000536295 SMCO2A6NFE2 343 aa16.36■□□□□ 0.21
RTN3P1-201ENST00000536295 TREHO43280 583 aa16.36■□□□□ 0.21
RTN3P1-201ENST00000536295 BAIAP3O94812 1187 aa16.36■□□□□ 0.21
RTN3P1-201ENST00000536295 PARNO95453 639 aaKnown RBP16.36■□□□□ 0.21
RTN3P1-201ENST00000536295 CA3P07451 260 aa16.36■□□□□ 0.21
RTN3P1-201ENST00000536295 IGFBP4P22692 258 aa16.36■□□□□ 0.21
RTN3P1-201ENST00000536295 TCF7P36402 384 aaPredicted RBP16.36■□□□□ 0.21
RTN3P1-201ENST00000536295 TCTN1Q2MV58 587 aa16.36■□□□□ 0.21
RTN3P1-201ENST00000536295 CNKSR3Q6P9H4 555 aa16.36■□□□□ 0.21
RTN3P1-201ENST00000536295 TRAF7Q6Q0C0 670 aa16.36■□□□□ 0.21
RTN3P1-201ENST00000536295 TMCO2Q7Z6W1 182 aaPredicted RBP16.36■□□□□ 0.21
RTN3P1-201ENST00000536295 HERC6Q8IVU3 1022 aa16.36■□□□□ 0.21
RTN3P1-201ENST00000536295 PHOSPHO2Q8TCD6 241 aa16.36■□□□□ 0.21
RTN3P1-201ENST00000536295 JADE2Q9NQC1 790 aa16.36■□□□□ 0.21
RTN3P1-201ENST00000536295 TMEM260Q9NX78 707 aa16.36■□□□□ 0.21
RTN3P1-201ENST00000536295 BARHL2Q9NY43 387 aa16.36■□□□□ 0.21
RTN3P1-201ENST00000536295 TET1Q8NFU7 2136 aa16.36■□□□□ 0.21
RTN3P1-201ENST00000536295 hCG_1984214I3L0E3 225 aa16.35■□□□□ 0.21
RTN3P1-201ENST00000536295 CXCL10P02778 98 aa16.35■□□□□ 0.21
RTN3P1-201ENST00000536295 RPS6KB1P23443 525 aa16.35■□□□□ 0.21
RTN3P1-201ENST00000536295 RCAN1P53805 252 aa16.35■□□□□ 0.21
RTN3P1-201ENST00000536295 WDR5P61964 334 aaKnown RBP16.35■□□□□ 0.21
RTN3P1-201ENST00000536295 ARHGAP4P98171 946 aa16.35■□□□□ 0.21
RTN3P1-201ENST00000536295 ADGRE1Q14246 886 aa16.35■□□□□ 0.21
RTN3P1-201ENST00000536295 MBTPS1Q14703 1052 aa16.35■□□□□ 0.21
RTN3P1-201ENST00000536295 ZNF713Q8N859 430 aaPredicted RBP16.35■□□□□ 0.21
RTN3P1-201ENST00000536295 USP38Q8NB14 1042 aa16.35■□□□□ 0.21
RTN3P1-201ENST00000536295 ANO3Q9BYT9 981 aa16.35■□□□□ 0.21
RTN3P1-201ENST00000536295 CERS4Q9HA82 394 aa16.35■□□□□ 0.21
RTN3P1-201ENST00000536295 CCDC196A0A1B0GTZ2 297 aa16.34■□□□□ 0.21
RTN3P1-201ENST00000536295 RSPH10B2B2RC85 870 aa16.34■□□□□ 0.21
RTN3P1-201ENST00000536295 KIF28PB7ZC32 967 aa16.34■□□□□ 0.21
RTN3P1-201ENST00000536295 PPFIA3O75145 1194 aa16.34■□□□□ 0.21
RTN3P1-201ENST00000536295 CTSHP09668 335 aa16.34■□□□□ 0.21
RTN3P1-201ENST00000536295 RSPH10BP0C881 870 aa16.34■□□□□ 0.21
RTN3P1-201ENST00000536295 GNAT1P11488 350 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms