RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 WTIPA6NIX2 430 aaPredicted RBP5.49□□□□□ -1.53
YBX3-205ENST00000536107 FBXO24O75426 580 aa5.49□□□□□ -1.53
YBX3-205ENST00000536107 KCNC1P48547 511 aa5.49□□□□□ -1.53
YBX3-205ENST00000536107 ADAM17P78536 824 aa5.49□□□□□ -1.53
YBX3-205ENST00000536107 MAP3K12Q12852 859 aa5.49□□□□□ -1.53
YBX3-205ENST00000536107 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.49□□□□□ -1.53
YBX3-205ENST00000536107 SLC6A19Q695T7 634 aa5.49□□□□□ -1.53
YBX3-205ENST00000536107 OTOP1Q7RTM1 612 aa5.49□□□□□ -1.53
YBX3-205ENST00000536107 KRT26Q7Z3Y9 468 aa5.49□□□□□ -1.53
YBX3-205ENST00000536107 IGDCC3Q8IVU1 814 aa5.49□□□□□ -1.53
YBX3-205ENST00000536107 MTMR10Q9NXD2 777 aa5.49□□□□□ -1.53
YBX3-205ENST00000536107 TJP2Q9UDY2 1190 aa5.49□□□□□ -1.53
YBX3-205ENST00000536107 SOS1Q07889 1333 aaPredicted RBP5.48□□□□□ -1.53
YBX3-205ENST00000536107 SBNO2Q9Y2G9 1366 aa5.48□□□□□ -1.53
YBX3-205ENST00000536107 ERVV-2B6SEH9 535 aa5.48□□□□□ -1.53
YBX3-205ENST00000536107 NRDCO43847 1150 aa5.48□□□□□ -1.53
YBX3-205ENST00000536107 NPR1P16066 1061 aa5.48□□□□□ -1.53
YBX3-205ENST00000536107 CDK8P49336 464 aa5.48□□□□□ -1.53
YBX3-205ENST00000536107 GMPSP49915 693 aaPredicted RBP5.48□□□□□ -1.53
YBX3-205ENST00000536107 HSP90AB2PQ58FF8 381 aa5.48□□□□□ -1.53
YBX3-205ENST00000536107 UBXN11Q5T124 520 aa5.48□□□□□ -1.53
YBX3-205ENST00000536107 TBC1D9BQ66K14 1250 aa5.48□□□□□ -1.53
YBX3-205ENST00000536107 RASAL3Q86YV0 1011 aa5.48□□□□□ -1.53
YBX3-205ENST00000536107 ARMC5Q96C12 935 aa5.48□□□□□ -1.53
YBX3-205ENST00000536107 VWCEQ96DN2 955 aa5.48□□□□□ -1.53
YBX3-205ENST00000536107 TMEM87BQ96K49 555 aa5.48□□□□□ -1.53
YBX3-205ENST00000536107 DPH2Q9BQC3 489 aaPredicted RBP5.48□□□□□ -1.53
YBX3-205ENST00000536107 HTATIP2Q9BUP3 242 aa5.48□□□□□ -1.53
YBX3-205ENST00000536107 SRCIN1Q9C0H9 1055 aa5.48□□□□□ -1.53
YBX3-205ENST00000536107 TERF2IPQ9NYB0 399 aa5.48□□□□□ -1.53
YBX3-205ENST00000536107 PGAP2Q9UHJ9 254 aa5.48□□□□□ -1.53
YBX3-205ENST00000536107 PTPN22Q9Y2R2 807 aa5.48□□□□□ -1.53
YBX3-205ENST00000536107 RANBP2P49792 3224 aaKnown RBP5.48□□□□□ -1.53
YBX3-205ENST00000536107 BRCA2P51587 3418 aa5.48□□□□□ -1.53
YBX3-205ENST00000536107 RPTORQ8N122 1335 aa5.48□□□□□ -1.53
YBX3-205ENST00000536107 LTN1O94822 1766 aa5.47□□□□□ -1.53
YBX3-205ENST00000536107 MAP2P11137 1827 aaKnown RBP5.47□□□□□ -1.53
YBX3-205ENST00000536107 VCANP13611 3396 aa5.47□□□□□ -1.53
YBX3-205ENST00000536107 ADM5C9JUS6 153 aa5.47□□□□□ -1.53
YBX3-205ENST00000536107 C1QTNF3-AMACRE9PGA6 284 aa5.47□□□□□ -1.53
YBX3-205ENST00000536107 H7C1D1 291 aa5.47□□□□□ -1.53
YBX3-205ENST00000536107 FSHBP01225 129 aa5.47□□□□□ -1.53
YBX3-205ENST00000536107 HSP90AB1P08238 724 aaKnown RBP5.47□□□□□ -1.53
YBX3-205ENST00000536107 CANXP27824 592 aaKnown RBP5.47□□□□□ -1.53
YBX3-205ENST00000536107 SLURP1P55000 103 aa5.47□□□□□ -1.53
YBX3-205ENST00000536107 SLC9C1Q4G0N8 1177 aa5.47□□□□□ -1.53
YBX3-205ENST00000536107 NPM2Q86SE8 214 aaKnown RBP5.47□□□□□ -1.53
YBX3-205ENST00000536107 DNAJC10Q8IXB1 793 aa5.47□□□□□ -1.53
YBX3-205ENST00000536107 DCPSQ96C86 337 aaKnown RBP5.47□□□□□ -1.53
YBX3-205ENST00000536107 SETDB2Q96T68 719 aa5.47□□□□□ -1.53
YBX3-205ENST00000536107 RBCK1Q9BYM8 510 aa5.47□□□□□ -1.53
YBX3-205ENST00000536107 PRO3102Q9H379 93 aa5.47□□□□□ -1.53
YBX3-205ENST00000536107 STAP2Q9UGK3 403 aa5.47□□□□□ -1.53
YBX3-205ENST00000536107 CACNA1AO00555 2505 aa5.47□□□□□ -1.53
YBX3-205ENST00000536107 FAM208AQ9UK61 1670 aaKnown RBP5.47□□□□□ -1.53
YBX3-205ENST00000536107 DICER1Q9UPY3 1922 aaKnown RBP5.46□□□□□ -1.53
YBX3-205ENST00000536107 COL15A1P39059 1388 aa5.46□□□□□ -1.54
YBX3-205ENST00000536107 CEP290O15078 2479 aa5.46□□□□□ -1.54
YBX3-205ENST00000536107 A0A087WZG4 1122 aa5.46□□□□□ -1.54
YBX3-205ENST00000536107 RBM47A0AV96 593 aaKnown RBP5.46□□□□□ -1.54
YBX3-205ENST00000536107 GFRA2O00451 464 aa5.46□□□□□ -1.54
YBX3-205ENST00000536107 FFAR3O14843 346 aa5.46□□□□□ -1.54
YBX3-205ENST00000536107 PPIP5K2O43314 1243 aa5.46□□□□□ -1.54
YBX3-205ENST00000536107 CELA3AP09093 270 aa5.46□□□□□ -1.54
YBX3-205ENST00000536107 PNLIPP16233 465 aa5.46□□□□□ -1.54
YBX3-205ENST00000536107 ALDH1B1P30837 517 aa5.46□□□□□ -1.54
YBX3-205ENST00000536107 SERPINB4P48594 390 aa5.46□□□□□ -1.54
YBX3-205ENST00000536107 HMGA2P52926 109 aa5.46□□□□□ -1.54
YBX3-205ENST00000536107 ERVFRD-1P60508 538 aa5.46□□□□□ -1.54
YBX3-205ENST00000536107 SREBF2Q12772 1141 aa5.46□□□□□ -1.54
YBX3-205ENST00000536107 ERO1AQ96HE7 468 aa5.46□□□□□ -1.54
YBX3-205ENST00000536107 PSMD1Q99460 953 aa5.46□□□□□ -1.54
YBX3-205ENST00000536107 TMX4Q9H1E5 349 aaPredicted RBP5.46□□□□□ -1.54
YBX3-205ENST00000536107 R3HDMLQ9H3Y0 253 aa5.46□□□□□ -1.54
YBX3-205ENST00000536107 IRS2Q9Y4H2 1338 aa5.46□□□□□ -1.54
YBX3-205ENST00000536107 FER1L6Q2WGJ9 1857 aa5.45□□□□□ -1.54
YBX3-205ENST00000536107 RTL1A6NKG5 1358 aa5.45□□□□□ -1.54
YBX3-205ENST00000536107 TCERG1O14776 1098 aaKnown RBP5.45□□□□□ -1.54
YBX3-205ENST00000536107 PPM1GO15355 546 aaPredicted RBP5.45□□□□□ -1.54
YBX3-205ENST00000536107 PGRP06401 933 aa5.45□□□□□ -1.54
YBX3-205ENST00000536107 KIR2DL1P43626 348 aaPredicted RBP5.45□□□□□ -1.54
YBX3-205ENST00000536107 KIR2DL2P43627 348 aaPredicted RBP5.45□□□□□ -1.54
YBX3-205ENST00000536107 TM4SF4P48230 202 aa5.45□□□□□ -1.54
YBX3-205ENST00000536107 NBPF5PQ86XG9 351 aaPredicted RBP5.45□□□□□ -1.54
YBX3-205ENST00000536107 MCATQ8IVS2 390 aaKnown RBP5.45□□□□□ -1.54
YBX3-205ENST00000536107 CD99L2Q8TCZ2 262 aa5.45□□□□□ -1.54
YBX3-205ENST00000536107 ZNF333Q96JL9 665 aa5.45□□□□□ -1.54
YBX3-205ENST00000536107 MENTQ9BUN1 341 aa5.45□□□□□ -1.54
YBX3-205ENST00000536107 SLC12A5Q9H2X9 1139 aa5.45□□□□□ -1.54
YBX3-205ENST00000536107 CNOT7Q9UIV1 285 aaKnown RBP5.45□□□□□ -1.54
YBX3-205ENST00000536107 ZBTB1Q9Y2K1 713 aa5.45□□□□□ -1.54
YBX3-205ENST00000536107 PCDHA5Q9Y5H7 936 aa5.45□□□□□ -1.54
YBX3-205ENST00000536107 TRPM7Q96QT4 1865 aa5.45□□□□□ -1.54
YBX3-205ENST00000536107 NPC1L1Q9UHC9 1359 aa5.44□□□□□ -1.54
YBX3-205ENST00000536107 ST20-MTHFSA0A0A6YYL1 179 aa5.44□□□□□ -1.54
YBX3-205ENST00000536107 USP2O75604 605 aaPredicted RBP5.44□□□□□ -1.54
YBX3-205ENST00000536107 RAD17O75943 681 aa5.44□□□□□ -1.54
YBX3-205ENST00000536107 CYP19A1P11511 503 aaPredicted RBP5.44□□□□□ -1.54
YBX3-205ENST00000536107 MTHFSP49914 203 aa5.44□□□□□ -1.54
YBX3-205ENST00000536107 CXCL9Q07325 125 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms