RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 USP38Q8NB14 1042 aa14.49□□□□□ -0.09
DDB1-207ENST00000535967 SNX21Q969T3 373 aa14.49□□□□□ -0.09
DDB1-207ENST00000535967 RNPC3Q96LT9 517 aaKnown RBP14.49□□□□□ -0.09
DDB1-207ENST00000535967 AIFM3Q96NN9 605 aa14.49□□□□□ -0.09
DDB1-207ENST00000535967 ALG1Q9BT22 464 aa14.49□□□□□ -0.09
DDB1-207ENST00000535967 PHF20Q9BVI0 1012 aa14.49□□□□□ -0.09
DDB1-207ENST00000535967 FAM184BQ9ULE4 1060 aa14.49□□□□□ -0.09
DDB1-207ENST00000535967 PCDHA4Q9UN74 947 aa14.49□□□□□ -0.09
DDB1-207ENST00000535967 KIF3AQ9Y496 699 aa14.49□□□□□ -0.09
DDB1-207ENST00000535967 KIAA0355O15063 1070 aa14.48□□□□□ -0.09
DDB1-207ENST00000535967 RARBP10826 455 aa14.48□□□□□ -0.09
DDB1-207ENST00000535967 TRIM29Q14134 588 aa14.48□□□□□ -0.09
DDB1-207ENST00000535967 FBXO16Q8IX29 292 aaPredicted RBP14.48□□□□□ -0.09
DDB1-207ENST00000535967 ANO3Q9BYT9 981 aa14.48□□□□□ -0.09
DDB1-207ENST00000535967 PCDHA6Q9UN73 950 aa14.48□□□□□ -0.09
DDB1-207ENST00000535967 PCDHA8Q9Y5H6 950 aa14.48□□□□□ -0.09
DDB1-207ENST00000535967 BDP1A6H8Y1 2624 aa14.47□□□□□ -0.09
DDB1-207ENST00000535967 RBM47A0AV96 593 aaKnown RBP14.47□□□□□ -0.09
DDB1-207ENST00000535967 K7ELQ4 463 aaPredicted RBP14.47□□□□□ -0.09
DDB1-207ENST00000535967 ADAMTS4O75173 837 aa14.47□□□□□ -0.09
DDB1-207ENST00000535967 EIF3JO75822 258 aaKnown RBP14.47□□□□□ -0.09
DDB1-207ENST00000535967 GRIN2CQ14957 1233 aa14.47□□□□□ -0.09
DDB1-207ENST00000535967 CCDC144BQ3MJ40 725 aa14.47□□□□□ -0.09
DDB1-207ENST00000535967 TAPT1Q6NXT6 567 aa14.47□□□□□ -0.09
DDB1-207ENST00000535967 VSIG10LQ86VR7 867 aa14.47□□□□□ -0.09
DDB1-207ENST00000535967 IL31RAQ8NI17 732 aa14.47□□□□□ -0.09
DDB1-207ENST00000535967 SCFD2Q8WU76 684 aa14.47□□□□□ -0.09
DDB1-207ENST00000535967 CHD7Q9P2D1 2997 aa14.47□□□□□ -0.09
DDB1-207ENST00000535967 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.47□□□□□ -0.09
DDB1-207ENST00000535967 MYH15Q9Y2K3 1946 aa14.47□□□□□ -0.09
DDB1-207ENST00000535967 MYADML2A6NDP7 307 aa14.46□□□□□ -0.09
DDB1-207ENST00000535967 RAG1P15918 1043 aa14.46□□□□□ -0.09
DDB1-207ENST00000535967 SREBF1P36956 1147 aa14.46□□□□□ -0.09
DDB1-207ENST00000535967 FAAP100Q0VG06 881 aa14.46□□□□□ -0.09
DDB1-207ENST00000535967 CUL4AQ13619 759 aa14.46□□□□□ -0.09
DDB1-207ENST00000535967 GNPTABQ3T906 1256 aa14.46□□□□□ -0.09
DDB1-207ENST00000535967 IQSEC1Q6DN90 963 aa14.46□□□□□ -0.09
DDB1-207ENST00000535967 KCNV1Q6PIU1 500 aa14.46□□□□□ -0.09
DDB1-207ENST00000535967 EEPD1Q7L9B9 569 aa14.46□□□□□ -0.09
DDB1-207ENST00000535967 BLIDQ8IZY5 108 aa14.46□□□□□ -0.09
DDB1-207ENST00000535967 FAM184AQ8NB25 1140 aa14.46□□□□□ -0.09
DDB1-207ENST00000535967 BRMS1Q9HCU9 246 aa14.46□□□□□ -0.09
DDB1-207ENST00000535967 DDX49Q9Y6V7 483 aaKnown RBP14.46□□□□□ -0.09
DDB1-207ENST00000535967 SYNRGQ9UMZ2 1314 aa14.46□□□□□ -0.1
DDB1-207ENST00000535967 WDR81Q562E7 1941 aa14.45□□□□□ -0.1
DDB1-207ENST00000535967 NKRFO15226 690 aaKnown RBP eCLIP14.45□□□□□ -0.1
DDB1-207ENST00000535967 ADCY6O43306 1168 aa14.45□□□□□ -0.1
DDB1-207ENST00000535967 DUSP11O75319 330 aaKnown RBP14.45□□□□□ -0.1
DDB1-207ENST00000535967 MYCLP12524 364 aaPredicted RBP14.45□□□□□ -0.1
DDB1-207ENST00000535967 TNFAIP2Q03169 654 aa14.45□□□□□ -0.1
DDB1-207ENST00000535967 FPGSQ05932 587 aa14.45□□□□□ -0.1
DDB1-207ENST00000535967 NPY5RQ15761 445 aa14.45□□□□□ -0.1
DDB1-207ENST00000535967 RNF180Q86T96 592 aa14.45□□□□□ -0.1
DDB1-207ENST00000535967 HSCBQ8IWL3 235 aa14.45□□□□□ -0.1
DDB1-207ENST00000535967 INPP4AQ96PE3 977 aaPredicted RBP14.45□□□□□ -0.1
DDB1-207ENST00000535967 PRDM6Q9NQX0 595 aa14.45□□□□□ -0.1
DDB1-207ENST00000535967 TMEM39AQ9NV64 488 aa14.45□□□□□ -0.1
DDB1-207ENST00000535967 TMEM260Q9NX78 707 aa14.45□□□□□ -0.1
DDB1-207ENST00000535967 Q9Y3F1 56 aa14.45□□□□□ -0.1
DDB1-207ENST00000535967 M0R2N6 131 aa14.44□□□□□ -0.1
DDB1-207ENST00000535967 MMP1P03956 469 aa14.44□□□□□ -0.1
DDB1-207ENST00000535967 DNAJB2P25686 324 aa14.44□□□□□ -0.1
DDB1-207ENST00000535967 ACLYP53396 1101 aa14.44□□□□□ -0.1
DDB1-207ENST00000535967 MRPS9P82933 396 aaKnown RBP14.44□□□□□ -0.1
DDB1-207ENST00000535967 TTLL4Q14679 1199 aa14.44□□□□□ -0.1
DDB1-207ENST00000535967 DUSP28Q4G0W2 176 aa14.44□□□□□ -0.1
DDB1-207ENST00000535967 JAKMIP3Q5VZ66 844 aa14.44□□□□□ -0.1
DDB1-207ENST00000535967 CCSAPQ6IQ19 270 aaPredicted RBP14.44□□□□□ -0.1
DDB1-207ENST00000535967 KRT25Q7Z3Z0 450 aa14.44□□□□□ -0.1
DDB1-207ENST00000535967 GPRASP2Q96D09 838 aa14.44□□□□□ -0.1
DDB1-207ENST00000535967 C8orf76Q96K31 380 aa14.44□□□□□ -0.1
DDB1-207ENST00000535967 UPF3AQ9H1J1 476 aaKnown RBP14.44□□□□□ -0.1
DDB1-207ENST00000535967 PDGFCQ9NRA1 345 aa14.44□□□□□ -0.1
DDB1-207ENST00000535967 KCNJ14Q9UNX9 436 aa14.44□□□□□ -0.1
DDB1-207ENST00000535967 FIBPO43427 364 aa14.43□□□□□ -0.1
DDB1-207ENST00000535967 ICAM3P32942 547 aa14.43□□□□□ -0.1
DDB1-207ENST00000535967 KRT2P35908 639 aa14.43□□□□□ -0.1
DDB1-207ENST00000535967 NKX3-2P78367 333 aa14.43□□□□□ -0.1
DDB1-207ENST00000535967 ARHGAP4P98171 946 aa14.43□□□□□ -0.1
DDB1-207ENST00000535967 KRT40Q6A162 431 aa14.43□□□□□ -0.1
DDB1-207ENST00000535967 C16orf59Q7L2K0 433 aa14.43□□□□□ -0.1
DDB1-207ENST00000535967 ANKRD33Q7Z3H0 272 aa14.43□□□□□ -0.1
DDB1-207ENST00000535967 TLK2Q86UE8 772 aa14.43□□□□□ -0.1
DDB1-207ENST00000535967 NLRX1Q86UT6 975 aa14.43□□□□□ -0.1
DDB1-207ENST00000535967 KLHDC9Q8NEP7 349 aa14.43□□□□□ -0.1
DDB1-207ENST00000535967 CRYGNQ8WXF5 182 aa14.43□□□□□ -0.1
DDB1-207ENST00000535967 INTS4Q96HW7 963 aaKnown RBP14.43□□□□□ -0.1
DDB1-207ENST00000535967 CDHR1Q96JP9 859 aa14.43□□□□□ -0.1
DDB1-207ENST00000535967 PGBD1Q96JS3 809 aa14.43□□□□□ -0.1
DDB1-207ENST00000535967 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.43□□□□□ -0.16e-8■□□□□ 9.7
DDB1-207ENST00000535967 WDR11Q9BZH6 1224 aa14.43□□□□□ -0.1
DDB1-207ENST00000535967 STARD7Q9NQZ5 370 aa14.43□□□□□ -0.1
DDB1-207ENST00000535967 TBX21Q9UL17 535 aa14.43□□□□□ -0.1
DDB1-207ENST00000535967 SMC3Q9UQE7 1217 aa14.43□□□□□ -0.1
DDB1-207ENST00000535967 GNEQ9Y223 722 aaKnown RBP14.43□□□□□ -0.1
DDB1-207ENST00000535967 GBF1Q92538 1859 aa14.43□□□□□ -0.1
DDB1-207ENST00000535967 REV3LO60673 3130 aa14.42□□□□□ -0.1
DDB1-207ENST00000535967 TMEM265A0A087WTH1 108 aa14.42□□□□□ -0.1
DDB1-207ENST00000535967 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.42□□□□□ -0.1
DDB1-207ENST00000535967 GRXCR1A8MXD5 290 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 163.6 ms