RNA–Protein interactions for RNA: ENST00000535900.5

UBE3B-205, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-205ENST00000535900 RPS6P62753 249 aaKnown RBP12.22□□□□□ -0.45
UBE3B-205ENST00000535900 CNTN2Q02246 1040 aa12.22□□□□□ -0.45
UBE3B-205ENST00000535900 STK38Q15208 465 aa12.22□□□□□ -0.45
UBE3B-205ENST00000535900 KCNA10Q16322 511 aa12.22□□□□□ -0.45
UBE3B-205ENST00000535900 UBE2SQ16763 222 aa12.22□□□□□ -0.45
UBE3B-205ENST00000535900 INF2Q27J81 1249 aa12.22□□□□□ -0.45
UBE3B-205ENST00000535900 ARL6IP4Q66PJ3 421 aaKnown RBP12.22□□□□□ -0.45
UBE3B-205ENST00000535900 KLHDC9Q8NEP7 349 aa12.22□□□□□ -0.45
UBE3B-205ENST00000535900 DNERQ8NFT8 737 aa12.22□□□□□ -0.45
UBE3B-205ENST00000535900 RASGRP4Q8TDF6 673 aa12.22□□□□□ -0.45
UBE3B-205ENST00000535900 LEO1Q8WVC0 666 aaPredicted RBP12.22□□□□□ -0.45
UBE3B-205ENST00000535900 CRYGNQ8WXF5 182 aa12.22□□□□□ -0.45
UBE3B-205ENST00000535900 VTI1AQ96AJ9 217 aa12.22□□□□□ -0.45
UBE3B-205ENST00000535900 MPHOSPH6Q99547 160 aaKnown RBP12.22□□□□□ -0.45
UBE3B-205ENST00000535900 LMBRD1Q9NUN5 540 aa12.22□□□□□ -0.45
UBE3B-205ENST00000535900 LCTP09848 1927 aa12.21□□□□□ -0.45
UBE3B-205ENST00000535900 ASB14A6NK59 587 aa12.21□□□□□ -0.45
UBE3B-205ENST00000535900 SPTLC2O15270 562 aa12.21□□□□□ -0.45
UBE3B-205ENST00000535900 TRAK2O60296 914 aa12.21□□□□□ -0.45
UBE3B-205ENST00000535900 STAM2O75886 525 aa12.21□□□□□ -0.45
UBE3B-205ENST00000535900 ITGB8P26012 769 aa12.21□□□□□ -0.45
UBE3B-205ENST00000535900 PRPHP41219 470 aa12.21□□□□□ -0.45
UBE3B-205ENST00000535900 SMAD3P84022 425 aaKnown RBP12.21□□□□□ -0.45
UBE3B-205ENST00000535900 ARHGAP4P98171 946 aa12.21□□□□□ -0.45
UBE3B-205ENST00000535900 NBR1Q14596 966 aa12.21□□□□□ -0.45
UBE3B-205ENST00000535900 SF3A1Q15459 793 aaKnown RBP12.21□□□□□ -0.45
UBE3B-205ENST00000535900 KLHL40Q2TBA0 621 aa12.21□□□□□ -0.45
UBE3B-205ENST00000535900 MUM1L1Q5H9M0 696 aa12.21□□□□□ -0.45
UBE3B-205ENST00000535900 EARS2Q5JPH6 523 aaKnown RBP12.21□□□□□ -0.45
UBE3B-205ENST00000535900 FAM173BQ6P4H8 233 aa12.21□□□□□ -0.45
UBE3B-205ENST00000535900 NSMFQ6X4W1 530 aa12.21□□□□□ -0.45
UBE3B-205ENST00000535900 ANKRD33Q7Z3H0 272 aa12.21□□□□□ -0.45
UBE3B-205ENST00000535900 TLK2Q86UE8 772 aa12.21□□□□□ -0.45
UBE3B-205ENST00000535900 FAM133AQ8N9E0 248 aa12.21□□□□□ -0.45
UBE3B-205ENST00000535900 SYTL5Q8TDW5 730 aaPredicted RBP12.21□□□□□ -0.45
UBE3B-205ENST00000535900 NSUN6Q8TEA1 469 aaKnown RBP12.21□□□□□ -0.45
UBE3B-205ENST00000535900 TOX2Q96NM4 488 aa12.21□□□□□ -0.45
UBE3B-205ENST00000535900 IWS1Q96ST2 819 aa12.21□□□□□ -0.45
UBE3B-205ENST00000535900 UPF3AQ9H1J1 476 aaKnown RBP12.21□□□□□ -0.45
UBE3B-205ENST00000535900 CYP39A1Q9NYL5 469 aa12.21□□□□□ -0.45
UBE3B-205ENST00000535900 TFIP11Q9UBB9 837 aaKnown RBP12.21□□□□□ -0.45
UBE3B-205ENST00000535900 ADD3Q9UEY8 706 aaKnown RBP12.21□□□□□ -0.45
UBE3B-205ENST00000535900 COL6A3P12111 3177 aa12.2□□□□□ -0.46
UBE3B-205ENST00000535900 MYH7BA7E2Y1 1941 aa12.2□□□□□ -0.46
UBE3B-205ENST00000535900 GOLGA6L4A6NEF3 574 aa12.2□□□□□ -0.46
UBE3B-205ENST00000535900 TBX3O15119 743 aa12.2□□□□□ -0.46
UBE3B-205ENST00000535900 TLR3O15455 904 aaKnown RBP12.2□□□□□ -0.46
UBE3B-205ENST00000535900 FIBPO43427 364 aa12.2□□□□□ -0.46
UBE3B-205ENST00000535900 HOXA13P31271 388 aaPredicted RBP12.2□□□□□ -0.46
UBE3B-205ENST00000535900 GJA9P57773 515 aa12.2□□□□□ -0.46
UBE3B-205ENST00000535900 UBE2HP62256 183 aa12.2□□□□□ -0.46
UBE3B-205ENST00000535900 IRX5P78411 483 aaPredicted RBP12.2□□□□□ -0.46
UBE3B-205ENST00000535900 ATP2C1P98194 919 aaPredicted RBP12.2□□□□□ -0.46
UBE3B-205ENST00000535900 TNFAIP2Q03169 654 aa12.2□□□□□ -0.46
UBE3B-205ENST00000535900 FAAP100Q0VG06 881 aa12.2□□□□□ -0.46
UBE3B-205ENST00000535900 BAATQ14032 418 aaPredicted RBP12.2□□□□□ -0.46
UBE3B-205ENST00000535900 PTPAQ15257 358 aa12.2□□□□□ -0.46
UBE3B-205ENST00000535900 FOXD4L6Q3SYB3 417 aaPredicted RBP12.2□□□□□ -0.46
UBE3B-205ENST00000535900 GNASQ5JWF2 1037 aa12.2□□□□□ -0.46
UBE3B-205ENST00000535900 CCSAPQ6IQ19 270 aaPredicted RBP12.2□□□□□ -0.46
UBE3B-205ENST00000535900 FOXD4L3Q6VB84 417 aaPredicted RBP12.2□□□□□ -0.46
UBE3B-205ENST00000535900 NIPA1Q7RTP0 329 aa12.2□□□□□ -0.46
UBE3B-205ENST00000535900 FCHSD1Q86WN1 690 aa12.2□□□□□ -0.46
UBE3B-205ENST00000535900 FBXO16Q8IX29 292 aaPredicted RBP12.2□□□□□ -0.46
UBE3B-205ENST00000535900 MBOAT7Q96N66 472 aa12.2□□□□□ -0.46
UBE3B-205ENST00000535900 TMEM260Q9NX78 707 aa12.2□□□□□ -0.46
UBE3B-205ENST00000535900 PCDHB6Q9Y5E3 794 aa12.2□□□□□ -0.46
UBE3B-205ENST00000535900 CLIC4Q9Y696 253 aa12.2□□□□□ -0.46
UBE3B-205ENST00000535900 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.19□□□□□ -0.46
UBE3B-205ENST00000535900 A0A1W2PQ27 194 aa12.19□□□□□ -0.46
UBE3B-205ENST00000535900 A0A1W2PQ64 194 aa12.19□□□□□ -0.46
UBE3B-205ENST00000535900 A0A1W2PQD8 194 aa12.19□□□□□ -0.46
UBE3B-205ENST00000535900 SOWAHBA6NEL2 793 aa12.19□□□□□ -0.46
UBE3B-205ENST00000535900 FAM205CA6NFA0 338 aa12.19□□□□□ -0.46
UBE3B-205ENST00000535900 ADAMTS3O15072 1205 aa12.19□□□□□ -0.46
UBE3B-205ENST00000535900 NEMFO60524 1076 aa12.19□□□□□ -0.46
UBE3B-205ENST00000535900 CCNT1O60563 726 aaKnown RBP12.19□□□□□ -0.46
UBE3B-205ENST00000535900 EPHB4P54760 987 aa12.19□□□□□ -0.46
UBE3B-205ENST00000535900 BEX3Q00994 111 aa12.19□□□□□ -0.46
UBE3B-205ENST00000535900 SETQ01105 290 aaPredicted RBP12.19□□□□□ -0.46
UBE3B-205ENST00000535900 LETM2Q2VYF4 491 aa12.19□□□□□ -0.46
UBE3B-205ENST00000535900 Q4G0T1 1027 aa12.19□□□□□ -0.46
UBE3B-205ENST00000535900 PCNX4Q63HM2 1172 aa12.19□□□□□ -0.46
UBE3B-205ENST00000535900 ADALQ6DHV7 355 aa12.19□□□□□ -0.46
UBE3B-205ENST00000535900 KRI1Q8N9T8 703 aaKnown RBP12.19□□□□□ -0.46
UBE3B-205ENST00000535900 ZNF579Q8NAF0 562 aaKnown RBP12.19□□□□□ -0.46
UBE3B-205ENST00000535900 RMDN3Q96TC7 470 aa12.19□□□□□ -0.46
UBE3B-205ENST00000535900 PPP1R12CQ9BZL4 782 aa12.19□□□□□ -0.46
UBE3B-205ENST00000535900 KATNBL1Q9H079 304 aa12.19□□□□□ -0.46
UBE3B-205ENST00000535900 AP5M1Q9H0R1 490 aa12.19□□□□□ -0.46
UBE3B-205ENST00000535900 TBX21Q9UL17 535 aa12.19□□□□□ -0.46
UBE3B-205ENST00000535900 ARVCFO00192 962 aa12.18□□□□□ -0.46
UBE3B-205ENST00000535900 MAFGO15525 162 aa12.18□□□□□ -0.46
UBE3B-205ENST00000535900 CUTAO60888 179 aa12.18□□□□□ -0.46
UBE3B-205ENST00000535900 PRPF40AO75400 957 aaKnown RBP12.18□□□□□ -0.46
UBE3B-205ENST00000535900 TIMP1P01033 207 aa12.18□□□□□ -0.46
UBE3B-205ENST00000535900 ATP2B1P20020 1258 aa12.18□□□□□ -0.46
UBE3B-205ENST00000535900 MCM7P33993 719 aa12.18□□□□□ -0.46
UBE3B-205ENST00000535900 ME1P48163 572 aa12.18□□□□□ -0.46
UBE3B-205ENST00000535900 PTGDRQ13258 359 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms