RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 IL17RAQ96F46 866 aa18.79■□□□□ 0.6
ATL3-202ENST00000535789 GPR20Q99678 358 aa18.79■□□□□ 0.6
ATL3-202ENST00000535789 BACH2Q9BYV9 841 aa18.79■□□□□ 0.6
ATL3-202ENST00000535789 HDAC6Q9UBN7 1215 aa18.79■□□□□ 0.6
ATL3-202ENST00000535789 GTF2IRD1Q9UHL9 959 aa18.79■□□□□ 0.6
ATL3-202ENST00000535789 REV3LO60673 3130 aa18.79■□□□□ 0.6
ATL3-202ENST00000535789 SPDYE3A6NKU9 549 aa18.78■□□□□ 0.6
ATL3-202ENST00000535789 LGALS2P05162 132 aa18.78■□□□□ 0.6
ATL3-202ENST00000535789 IFNAR1P17181 557 aa18.78■□□□□ 0.6
ATL3-202ENST00000535789 PPIGQ13427 754 aaKnown RBP eCLIP18.78■□□□□ 0.6
ATL3-202ENST00000535789 KIAA0753Q2KHM9 967 aa18.78■□□□□ 0.6
ATL3-202ENST00000535789 CRYGNQ8WXF5 182 aa18.78■□□□□ 0.6
ATL3-202ENST00000535789 RNPC3Q96LT9 517 aaKnown RBP18.78■□□□□ 0.6
ATL3-202ENST00000535789 ALG1Q9BT22 464 aa18.78■□□□□ 0.6
ATL3-202ENST00000535789 PRUNE2Q8WUY3 3088 aa18.78■□□□□ 0.6
ATL3-202ENST00000535789 CCDC196A0A1B0GTZ2 297 aa18.77■□□□□ 0.6
ATL3-202ENST00000535789 ESYT2A0FGR8 921 aa18.77■□□□□ 0.6
ATL3-202ENST00000535789 DTNBO60941 627 aa18.77■□□□□ 0.6
ATL3-202ENST00000535789 ZNF200P98182 395 aaPredicted RBP18.77■□□□□ 0.6
ATL3-202ENST00000535789 GPR153Q6NV75 609 aa18.77■□□□□ 0.6
ATL3-202ENST00000535789 ZNF365Q70YC5 407 aa18.77■□□□□ 0.6
ATL3-202ENST00000535789 TMEM199Q8N511 208 aa18.77■□□□□ 0.6
ATL3-202ENST00000535789 SLC26A6Q9BXS9 759 aa18.77■□□□□ 0.6
ATL3-202ENST00000535789 RNF26Q9BY78 433 aaPredicted RBP18.77■□□□□ 0.6
ATL3-202ENST00000535789 ZMYND12Q9H0C1 365 aa18.77■□□□□ 0.6
ATL3-202ENST00000535789 MLXIPQ9HAP2 919 aa18.77■□□□□ 0.6
ATL3-202ENST00000535789 IL23AQ9NPF7 189 aa18.77■□□□□ 0.6
ATL3-202ENST00000535789 PKD2L1Q9P0L9 805 aa18.77■□□□□ 0.6
ATL3-202ENST00000535789 PPFIA4O75335 1185 aa18.76■□□□□ 0.59
ATL3-202ENST00000535789 HOXC8P31273 242 aa18.76■□□□□ 0.59
ATL3-202ENST00000535789 SREBF1P36956 1147 aa18.76■□□□□ 0.59
ATL3-202ENST00000535789 NEDD9Q14511 834 aa18.76■□□□□ 0.59
ATL3-202ENST00000535789 GPNMBQ14956 572 aa18.76■□□□□ 0.59
ATL3-202ENST00000535789 PTGISQ16647 500 aa18.76■□□□□ 0.59
ATL3-202ENST00000535789 RASGRP4Q8TDF6 673 aa18.76■□□□□ 0.59
ATL3-202ENST00000535789 SENP7Q9BQF6 1050 aa18.76■□□□□ 0.59
ATL3-202ENST00000535789 JADE2Q9NQC1 790 aa18.76■□□□□ 0.59
ATL3-202ENST00000535789 PDRG1Q9NUG6 133 aa18.76■□□□□ 0.59
ATL3-202ENST00000535789 CXXC1Q9P0U4 656 aaPredicted RBP18.76■□□□□ 0.59
ATL3-202ENST00000535789 EVPLQ92817 2033 aa18.76■□□□□ 0.59
ATL3-202ENST00000535789 UNC80Q8N2C7 3258 aa18.75■□□□□ 0.59
ATL3-202ENST00000535789 TRANK1O15050 2925 aa18.75■□□□□ 0.59
ATL3-202ENST00000535789 EDIL3O43854 480 aa18.75■□□□□ 0.59
ATL3-202ENST00000535789 LARGE1O95461 756 aa18.75■□□□□ 0.59
ATL3-202ENST00000535789 SUPT20HL2P0C7V6 817 aa18.75■□□□□ 0.59
ATL3-202ENST00000535789 SP4Q02446 784 aa18.75■□□□□ 0.59
ATL3-202ENST00000535789 STK3Q13188 491 aa18.75■□□□□ 0.59
ATL3-202ENST00000535789 AP3B2Q13367 1082 aa18.75■□□□□ 0.59
ATL3-202ENST00000535789 MTMR1Q13613 665 aa18.75■□□□□ 0.59
ATL3-202ENST00000535789 TRIM71Q2Q1W2 868 aaKnown RBP18.75■□□□□ 0.59
ATL3-202ENST00000535789 JAKMIP3Q5VZ66 844 aa18.75■□□□□ 0.59
ATL3-202ENST00000535789 TRAF7Q6Q0C0 670 aa18.75■□□□□ 0.59
ATL3-202ENST00000535789 NLRX1Q86UT6 975 aa18.75■□□□□ 0.59
ATL3-202ENST00000535789 ZNF274Q96GC6 653 aaPredicted RBP18.75■□□□□ 0.59
ATL3-202ENST00000535789 AIFM3Q96NN9 605 aa18.75■□□□□ 0.59
ATL3-202ENST00000535789 MXRA8Q9BRK3 442 aa18.75■□□□□ 0.59
ATL3-202ENST00000535789 KATNAL1Q9BW62 490 aa18.75■□□□□ 0.59
ATL3-202ENST00000535789 VPS54Q9P1Q0 977 aa18.75■□□□□ 0.59
ATL3-202ENST00000535789 TPCN1Q9ULQ1 816 aa18.75■□□□□ 0.59
ATL3-202ENST00000535789 MYO9BQ13459 2157 aa18.74■□□□□ 0.59
ATL3-202ENST00000535789 PITPNM1O00562 1244 aa18.74■□□□□ 0.59
ATL3-202ENST00000535789 ARP10275 920 aa18.74■□□□□ 0.59
ATL3-202ENST00000535789 ANAPC15P60006 121 aa18.74■□□□□ 0.59
ATL3-202ENST00000535789 RBL2Q08999 1139 aa18.74■□□□□ 0.59
ATL3-202ENST00000535789 SCRN1Q12765 414 aa18.74■□□□□ 0.59
ATL3-202ENST00000535789 ITGB3BPQ13352 177 aaPredicted RBP18.74■□□□□ 0.59
ATL3-202ENST00000535789 NPY5RQ15761 445 aa18.74■□□□□ 0.59
ATL3-202ENST00000535789 PSRC1Q6PGN9 363 aaPredicted RBP18.74■□□□□ 0.59
ATL3-202ENST00000535789 TEX2Q8IWB9 1127 aa18.74■□□□□ 0.59
ATL3-202ENST00000535789 DEFB123Q8N688 67 aa18.74■□□□□ 0.59
ATL3-202ENST00000535789 IGLV3-22A0A075B6J6 115 aa18.73■□□□□ 0.59
ATL3-202ENST00000535789 GSTTP1A0A1W2PQM5 241 aa18.73■□□□□ 0.59
ATL3-202ENST00000535789 GRXCR1A8MXD5 290 aa18.73■□□□□ 0.59
ATL3-202ENST00000535789 FAM86B1E9PN63 330 aa18.73■□□□□ 0.59
ATL3-202ENST00000535789 FOSP01100 380 aaPredicted RBP18.73■□□□□ 0.59
ATL3-202ENST00000535789 FAM86B2P0C5J1 330 aa18.73■□□□□ 0.59
ATL3-202ENST00000535789 AK2P54819 239 aa18.73■□□□□ 0.59
ATL3-202ENST00000535789 SMAD3P84022 425 aaKnown RBP18.73■□□□□ 0.59
ATL3-202ENST00000535789 C7orf31Q8N865 590 aa18.73■□□□□ 0.59
ATL3-202ENST00000535789 TTYH1Q9H313 450 aaPredicted RBP18.73■□□□□ 0.59
ATL3-202ENST00000535789 KCNH7Q9NS40 1196 aa18.73■□□□□ 0.59
ATL3-202ENST00000535789 MTMR10Q9NXD2 777 aa18.73■□□□□ 0.59
ATL3-202ENST00000535789 COL4A4P53420 1690 aaPredicted RBP18.73■□□□□ 0.59
ATL3-202ENST00000535789 H3BRB1 525 aa18.72■□□□□ 0.59
ATL3-202ENST00000535789 NOP56O00567 594 aaKnown RBP18.72■□□□□ 0.59
ATL3-202ENST00000535789 IQCF3P0C7M6 154 aa18.72■□□□□ 0.59
ATL3-202ENST00000535789 SMIM10L2AP0DMW4 78 aa18.72■□□□□ 0.59
ATL3-202ENST00000535789 SMIM10L2BP0DMW5 78 aa18.72■□□□□ 0.59
ATL3-202ENST00000535789 TCF7P36402 384 aaPredicted RBP18.72■□□□□ 0.59
ATL3-202ENST00000535789 ARHGAP4P98171 946 aa18.72■□□□□ 0.59
ATL3-202ENST00000535789 TCTN1Q2MV58 587 aa18.72■□□□□ 0.59
ATL3-202ENST00000535789 HERVK_113Q902F9 699 aa18.72■□□□□ 0.59
ATL3-202ENST00000535789 GUCD1Q96NT3 240 aa18.72■□□□□ 0.59
ATL3-202ENST00000535789 PCYT2Q99447 389 aa18.72■□□□□ 0.59
ATL3-202ENST00000535789 TUT1Q9H6E5 874 aaKnown RBP18.72■□□□□ 0.59
ATL3-202ENST00000535789 MEIS1O00470 390 aa18.71■□□□□ 0.59
ATL3-202ENST00000535789 CTDNEP1O95476 244 aa18.71■□□□□ 0.59
ATL3-202ENST00000535789 PBX2P40425 430 aa18.71■□□□□ 0.59
ATL3-202ENST00000535789 ST3GAL1Q11201 340 aa18.71■□□□□ 0.59
ATL3-202ENST00000535789 MBTPS1Q14703 1052 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms