RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 SPATA31C2B4DYI2 1134 aa23.77■■□□□ 1.4
LTBR-205ENST00000535739 NOP56O00567 594 aaKnown RBP23.77■■□□□ 1.4
LTBR-205ENST00000535739 GJB5O95377 273 aa23.77■■□□□ 1.4
LTBR-205ENST00000535739 THPOP40225 353 aa23.77■■□□□ 1.4
LTBR-205ENST00000535739 USP17L6PQ6QN14 398 aa23.77■■□□□ 1.4
LTBR-205ENST00000535739 CYFIP1Q7L576 1253 aa23.77■■□□□ 1.4
LTBR-205ENST00000535739 CTCFLQ8NI51 663 aaPredicted RBP23.77■■□□□ 1.4
LTBR-205ENST00000535739 ATP6V0A1Q93050 837 aa23.77■■□□□ 1.4
LTBR-205ENST00000535739 RRP36Q96EU6 259 aaKnown RBP23.77■■□□□ 1.4
LTBR-205ENST00000535739 MAP3K14Q99558 947 aa23.77■■□□□ 1.4
LTBR-205ENST00000535739 SPZ1Q9BXG8 430 aa23.77■■□□□ 1.4
LTBR-205ENST00000535739 PRC1O43663 620 aa23.76■■□□□ 1.39
LTBR-205ENST00000535739 LPXNO60711 386 aa23.76■■□□□ 1.39
LTBR-205ENST00000535739 EFCAB14O75071 495 aa23.76■■□□□ 1.39
LTBR-205ENST00000535739 LGR5O75473 907 aa23.76■■□□□ 1.39
LTBR-205ENST00000535739 STAM2O75886 525 aa23.76■■□□□ 1.39
LTBR-205ENST00000535739 DDAH1O94760 285 aa23.76■■□□□ 1.39
LTBR-205ENST00000535739 SMIM10L2AP0DMW4 78 aa23.76■■□□□ 1.39
LTBR-205ENST00000535739 SMIM10L2BP0DMW5 78 aa23.76■■□□□ 1.39
LTBR-205ENST00000535739 COL9A3Q14050 684 aaPredicted RBP23.76■■□□□ 1.39
LTBR-205ENST00000535739 NEDD9Q14511 834 aa23.76■■□□□ 1.39
LTBR-205ENST00000535739 FAM117BQ6P1L5 589 aa23.76■■□□□ 1.39
LTBR-205ENST00000535739 CASC1Q6TDU7 716 aa23.76■■□□□ 1.39
LTBR-205ENST00000535739 SMARCC2Q8TAQ2 1214 aa23.76■■□□□ 1.39
LTBR-205ENST00000535739 RAD9AQ99638 391 aa23.76■■□□□ 1.39
LTBR-205ENST00000535739 RNPEPQ9H4A4 650 aa23.76■■□□□ 1.39
LTBR-205ENST00000535739 TELO2Q9Y4R8 837 aa23.76■■□□□ 1.39
LTBR-205ENST00000535739 SIP14410 1827 aa23.75■■□□□ 1.39
LTBR-205ENST00000535739 RSPH10B2B2RC85 870 aa23.75■■□□□ 1.39
LTBR-205ENST00000535739 TREHO43280 583 aa23.75■■□□□ 1.39
LTBR-205ENST00000535739 PLEKHA8P1O95397 391 aa23.75■■□□□ 1.39
LTBR-205ENST00000535739 RSPH10BP0C881 870 aa23.75■■□□□ 1.39
LTBR-205ENST00000535739 BMP1P13497 986 aa23.75■■□□□ 1.39
LTBR-205ENST00000535739 HOXC8P31273 242 aa23.75■■□□□ 1.39
LTBR-205ENST00000535739 KIF5BP33176 963 aa23.75■■□□□ 1.39
LTBR-205ENST00000535739 KCNQ1P51787 676 aa23.75■■□□□ 1.39
LTBR-205ENST00000535739 METTL7BQ6UX53 244 aa23.75■■□□□ 1.39
LTBR-205ENST00000535739 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.75■■□□□ 1.39
LTBR-205ENST00000535739 CUL5Q93034 780 aa23.75■■□□□ 1.39
LTBR-205ENST00000535739 NECAB3Q96P71 396 aaPredicted RBP23.75■■□□□ 1.39
LTBR-205ENST00000535739 GPR20Q99678 358 aa23.75■■□□□ 1.39
LTBR-205ENST00000535739 USP26Q9BXU7 913 aa23.75■■□□□ 1.39
LTBR-205ENST00000535739 MEIS2O14770 477 aa23.74■■□□□ 1.39
LTBR-205ENST00000535739 FIBPO43427 364 aa23.74■■□□□ 1.39
LTBR-205ENST00000535739 NFXL1Q6ZNB6 911 aa23.74■■□□□ 1.39
LTBR-205ENST00000535739 CMTR1Q8N1G2 835 aaKnown RBP23.74■■□□□ 1.39
LTBR-205ENST00000535739 SRBD1Q8N5C6 995 aaKnown RBP23.74■■□□□ 1.39
LTBR-205ENST00000535739 DBF4BQ8NFT6 615 aa23.74■■□□□ 1.39
LTBR-205ENST00000535739 GDPD5Q8WTR4 605 aa23.74■■□□□ 1.39
LTBR-205ENST00000535739 LSG1Q9H089 658 aaKnown RBP23.74■■□□□ 1.39
LTBR-205ENST00000535739 SEC63Q9UGP8 760 aaKnown RBP23.74■■□□□ 1.39
LTBR-205ENST00000535739 MTUS1Q9ULD2 1270 aa23.74■■□□□ 1.39
LTBR-205ENST00000535739 EMSYQ7Z589 1322 aa23.74■■□□□ 1.39
LTBR-205ENST00000535739 SH2B2O14492 632 aaPredicted RBP23.73■■□□□ 1.39
LTBR-205ENST00000535739 RXRAP19793 462 aa23.73■■□□□ 1.39
LTBR-205ENST00000535739 SMARCA1P28370 1054 aa23.73■■□□□ 1.39
LTBR-205ENST00000535739 MCM5P33992 734 aa23.73■■□□□ 1.39
LTBR-205ENST00000535739 AAK1Q2M2I8 961 aa23.73■■□□□ 1.39
LTBR-205ENST00000535739 PCNX4Q63HM2 1172 aa23.73■■□□□ 1.39
LTBR-205ENST00000535739 TRIM50Q86XT4 487 aa23.73■■□□□ 1.39
LTBR-205ENST00000535739 MTA3Q9BTC8 594 aa23.73■■□□□ 1.39
LTBR-205ENST00000535739 SETD4Q9NVD3 440 aa23.73■■□□□ 1.39
LTBR-205ENST00000535739 LINC01553A4QN01 128 aa23.72■■□□□ 1.39
LTBR-205ENST00000535739 CCDC69A6NI79 296 aa23.72■■□□□ 1.39
LTBR-205ENST00000535739 PIK3CDO00329 1044 aa23.72■■□□□ 1.39
LTBR-205ENST00000535739 SP4Q02446 784 aa23.72■■□□□ 1.39
LTBR-205ENST00000535739 UTP14CQ5TAP6 766 aaKnown RBP23.72■■□□□ 1.39
LTBR-205ENST00000535739 TGS1Q96RS0 853 aaKnown RBP23.72■■□□□ 1.39
LTBR-205ENST00000535739 LZTS2Q9BRK4 669 aa23.72■■□□□ 1.39
LTBR-205ENST00000535739 OSBPL7Q9BZF2 842 aa23.72■■□□□ 1.39
LTBR-205ENST00000535739 SLC27A2O14975 620 aa23.71■■□□□ 1.39
LTBR-205ENST00000535739 CTSHP09668 335 aa23.71■■□□□ 1.39
LTBR-205ENST00000535739 GNAQP50148 359 aa23.71■■□□□ 1.39
LTBR-205ENST00000535739 ERVK-21P61565 698 aa23.71■■□□□ 1.39
LTBR-205ENST00000535739 MKRN4PQ13434 485 aaPredicted RBP23.71■■□□□ 1.39
LTBR-205ENST00000535739 PLEKHG4Q58EX7 1191 aa23.71■■□□□ 1.39
LTBR-205ENST00000535739 RAB11FIP4Q86YS3 637 aa23.71■■□□□ 1.39
LTBR-205ENST00000535739 TMTC2Q8N394 836 aa23.71■■□□□ 1.39
LTBR-205ENST00000535739 TMEM87BQ96K49 555 aa23.71■■□□□ 1.39
LTBR-205ENST00000535739 SUGCTQ9HAC7 445 aa23.71■■□□□ 1.39
LTBR-205ENST00000535739 COG5Q9UP83 839 aa23.71■■□□□ 1.39
LTBR-205ENST00000535739 hCG_1642624A0A1W2PR95 340 aa23.7■■□□□ 1.38
LTBR-205ENST00000535739 XRRA1Q6P2D8 792 aa23.7■■□□□ 1.38
LTBR-205ENST00000535739 MYOCDQ8IZQ8 938 aa23.7■■□□□ 1.38
LTBR-205ENST00000535739 SENP7Q9BQF6 1050 aa23.7■■□□□ 1.38
LTBR-205ENST00000535739 ESYT1Q9BSJ8 1104 aa23.7■■□□□ 1.38
LTBR-205ENST00000535739 LRRC2Q9BYS8 371 aa23.7■■□□□ 1.38
LTBR-205ENST00000535739 AMHP03971 560 aa23.69■■□□□ 1.38
LTBR-205ENST00000535739 CREB3L3Q68CJ9 461 aa23.69■■□□□ 1.38
LTBR-205ENST00000535739 NLRX1Q86UT6 975 aa23.69■■□□□ 1.38
LTBR-205ENST00000535739 CCDC82Q8N4S0 544 aa23.69■■□□□ 1.38
LTBR-205ENST00000535739 HLA-CQ95604 372 aa23.69■■□□□ 1.38
LTBR-205ENST00000535739 PSTPIP2Q9H939 334 aa23.69■■□□□ 1.38
LTBR-205ENST00000535739 LMCD1Q9NZU5 365 aa23.69■■□□□ 1.38
LTBR-205ENST00000535739 ZNF215Q9UL58 517 aaPredicted RBP23.69■■□□□ 1.38
LTBR-205ENST00000535739 INSL6Q9Y581 213 aa23.69■■□□□ 1.38
LTBR-205ENST00000535739 ATP9AO75110 1047 aa23.68■■□□□ 1.38
LTBR-205ENST00000535739 NEFLP07196 543 aa23.68■■□□□ 1.38
LTBR-205ENST00000535739 GNAT1P11488 350 aa23.68■■□□□ 1.38
LTBR-205ENST00000535739 LIFRP42702 1097 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms