RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 SPRED2Q7Z698 418 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 SLCO6A1Q86UG4 719 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 CPNE8Q86YQ8 564 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 ANKRD13AQ8IZ07 590 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 NLGN1Q8N2Q7 840 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 KREMEN2Q8NCW0 462 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 GSTCDQ8NEC7 633 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 SEC14L1Q92503 715 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 C1orf159Q96HA4 380 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 KIRREL1Q96J84 757 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 WNK4Q96J92 1243 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 HHIPL1Q96JK4 782 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 PCGF6Q9BYE7 350 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 CLDND1Q9NY35 253 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 GPR160Q9UJ42 338 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 MCM8Q9UJA3 840 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.52□□□□□ -1.69
SNHG1-202ENST00000535689 PCDHA2Q9Y5H9 948 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 MIA2Q96PC5 1412 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 SYNMO15061 1565 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 UGGT1Q9NYU2 1555 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 JCADQ9P266 1359 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 SBNO2Q9Y2G9 1366 aa4.52□□□□□ -1.69
SNHG1-202ENST00000535689 LRRC7Q96NW7 1537 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 KDM5DQ9BY66 1539 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 IQGAP1P46940 1657 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 RBAK-RBAKDNI3L0D1 243 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 WNT9AO14904 365 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 KIF3BO15066 747 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 TBX1O43435 398 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 GAS7O60861 476 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 SOD2P04179 222 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 TSPY4P0CV99 314 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 TSPY10P0CW01 314 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 GNAT1P11488 350 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 PRKCAP17252 672 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 GRIA2P42262 883 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 SLC6A11P48066 632 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 SCNN1BP51168 640 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 IRAK1P51617 712 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 CFAP100Q494V2 611 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 BICRALQ6AI39 1079 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 FILIP1Q7Z7B0 1213 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 IRF2BP1Q8IU81 584 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 RCBTB1Q8NDN9 531 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 IFT57Q9NWB7 429 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 CFDP1Q9UEE9 299 aaPredicted RBP4.51□□□□□ -1.69
SNHG1-202ENST00000535689 CD2APQ9Y5K6 639 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 U3KQE9 123 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 X6R8D5 127 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 KIAA1107Q9UPP5 1409 aa4.51□□□□□ -1.69
SNHG1-202ENST00000535689 LRRC9Q6ZRR7 1453 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 VWDEQ8N2E2 1590 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 LOC105371045A0A1W2PR82 267 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 OR14I1A6ND48 311 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 WASH4PA8MWX3 477 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 C22orf46C9J442 243 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 HRKO00198 91 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 MAFGO15525 162 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 SRGAP3O43295 1099 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 HIP1RO75146 1068 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 CRTAMO95727 393 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 CYBBP04839 570 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 MYCLP1P12525 358 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-202ENST00000535689 KCNA6P17658 529 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 POU3F2P20265 443 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-202ENST00000535689 GJA4P35212 333 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 IGBP1P78318 339 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 KCNMB1Q16558 191 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 PRSS53Q2L4Q9 553 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 TM4SF20Q53R12 229 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 DALRD3Q5D0E6 543 aaKnown RBP4.5□□□□□ -1.69
SNHG1-202ENST00000535689 RALGPS1Q5JS13 557 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 YOD1Q5VVQ6 348 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-202ENST00000535689 PAQR3Q6TCH7 311 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 ZNF574Q6ZN55 896 aaPredicted RBP4.5□□□□□ -1.69
SNHG1-202ENST00000535689 BRAPQ7Z569 592 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 C11orf74Q86VG3 221 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 LRRTM3Q86VH5 581 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 OR2W6PQ8NHA6 318 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 DDX1Q92499 740 aaKnown RBP4.5□□□□□ -1.69
SNHG1-202ENST00000535689 DDX11Q96FC9 970 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 MCMBPQ9BTE3 642 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 G6PC3Q9BUM1 346 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 KRTAP9-2Q9BYQ4 174 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 CELF4Q9BZC1 486 aaKnown RBP4.5□□□□□ -1.69
SNHG1-202ENST00000535689 SLC52A2Q9HAB3 445 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 CATSPERZQ9NTU4 200 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 MARCH2Q9P0N8 246 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 CTNND2Q9UQB3 1225 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 CDK13Q14004 1512 aaKnown RBP4.5□□□□□ -1.69
SNHG1-202ENST00000535689 DHX29Q7Z478 1369 aaKnown RBP4.5□□□□□ -1.69
SNHG1-202ENST00000535689 PREX2Q70Z35 1606 aa4.5□□□□□ -1.69
SNHG1-202ENST00000535689 CDK12Q9NYV4 1490 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-202ENST00000535689 SAMD9LQ8IVG5 1584 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 RTEL1-TNFRSF6BF6WH68 1400 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 hCG_2014768A0A024R1R8 64 aa4.49□□□□□ -1.69
SNHG1-202ENST00000535689 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-202ENST00000535689 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.49□□□□□ -1.69
SNHG1-202ENST00000535689 ARVCFO00192 962 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms