RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 ELP1O95163 1332 aa13.86□□□□□ -0.19
SCARB1-204ENST00000535005 SPTLC2O15270 562 aa13.86□□□□□ -0.19
SCARB1-204ENST00000535005 MSH4O15457 936 aa13.86□□□□□ -0.19
SCARB1-204ENST00000535005 FIBPO43427 364 aa13.86□□□□□ -0.19
SCARB1-204ENST00000535005 ADCY5O95622 1261 aa13.86□□□□□ -0.19
SCARB1-204ENST00000535005 OR52Z1P0C646 297 aa13.86□□□□□ -0.19
SCARB1-204ENST00000535005 ARP10275 920 aa13.86□□□□□ -0.19
SCARB1-204ENST00000535005 MTMR1Q13613 665 aa13.86□□□□□ -0.19
SCARB1-204ENST00000535005 CALCRLQ16602 461 aa13.86□□□□□ -0.19
SCARB1-204ENST00000535005 TAF3Q5VWG9 929 aa13.86□□□□□ -0.19
SCARB1-204ENST00000535005 HAS1Q92839 578 aa13.86□□□□□ -0.19
SCARB1-204ENST00000535005 ZFP91Q96JP5 570 aaPredicted RBP13.86□□□□□ -0.19
SCARB1-204ENST00000535005 SPATA32Q96LK8 384 aa13.86□□□□□ -0.19
SCARB1-204ENST00000535005 WDR11Q9BZH6 1224 aa13.86□□□□□ -0.19
SCARB1-204ENST00000535005 KCNH7Q9NS40 1196 aa13.86□□□□□ -0.19
SCARB1-204ENST00000535005 FLRT1Q9NZU1 646 aa13.86□□□□□ -0.19
SCARB1-204ENST00000535005 RBM47A0AV96 593 aaKnown RBP13.85□□□□□ -0.19
SCARB1-204ENST00000535005 TGFB3P10600 412 aa13.85□□□□□ -0.19
SCARB1-204ENST00000535005 SEMA3FQ13275 785 aa13.85□□□□□ -0.19
SCARB1-204ENST00000535005 CCL14Q16627 93 aa13.85□□□□□ -0.19
SCARB1-204ENST00000535005 KCNV1Q6PIU1 500 aa13.85□□□□□ -0.19
SCARB1-204ENST00000535005 SLFN12Q8IYM2 578 aa13.85□□□□□ -0.19
SCARB1-204ENST00000535005 SLC5A5Q92911 643 aa13.85□□□□□ -0.19
SCARB1-204ENST00000535005 ABHD16BQ9H3Z7 469 aa13.85□□□□□ -0.19
SCARB1-204ENST00000535005 AGO4Q9HCK5 861 aaKnown RBP13.85□□□□□ -0.19
SCARB1-204ENST00000535005 NRBP1Q9UHY1 535 aa13.85□□□□□ -0.19
SCARB1-204ENST00000535005 LRRC37A2A6NM11 1700 aa13.85□□□□□ -0.19
SCARB1-204ENST00000535005 HSPA8P11142 646 aaKnown RBP13.85□□□□□ -0.19
SCARB1-204ENST00000535005 ZNF710Q8N1W2 664 aa13.85□□□□□ -0.19
SCARB1-204ENST00000535005 FERMT2Q96AC1 680 aa13.85□□□□□ -0.19
SCARB1-204ENST00000535005 RIT2Q99578 217 aa13.85□□□□□ -0.19
SCARB1-204ENST00000535005 FBXO2Q9UK22 296 aaPredicted RBP13.85□□□□□ -0.19
SCARB1-204ENST00000535005 SRPRBQ9Y5M8 271 aaKnown RBP13.85□□□□□ -0.19
SCARB1-204ENST00000535005 CASP8AP2Q9UKL3 1982 aa13.85□□□□□ -0.19
SCARB1-204ENST00000535005 IPO5O00410 1097 aaKnown RBP13.84□□□□□ -0.19
SCARB1-204ENST00000535005 FOXN1O15353 648 aa13.84□□□□□ -0.19
SCARB1-204ENST00000535005 TAPT1Q6NXT6 567 aa13.84□□□□□ -0.19
SCARB1-204ENST00000535005 CCDC62Q6P9F0 684 aa13.84□□□□□ -0.19
SCARB1-204ENST00000535005 OTOP1Q7RTM1 612 aa13.84□□□□□ -0.19
SCARB1-204ENST00000535005 PXYLP1Q8TE99 480 aa13.84□□□□□ -0.19
SCARB1-204ENST00000535005 ANKRD7Q92527 254 aa13.84□□□□□ -0.19
SCARB1-204ENST00000535005 SENP7Q9BQF6 1050 aa13.84□□□□□ -0.19
SCARB1-204ENST00000535005 ZNF577Q9BSK1 485 aa13.84□□□□□ -0.19
SCARB1-204ENST00000535005 MRVI1Q9Y6F6 885 aa13.84□□□□□ -0.19
SCARB1-204ENST00000535005 TCHHQ07283 1943 aa13.84□□□□□ -0.19
SCARB1-204ENST00000535005 DHX15O43143 795 aaKnown RBP13.83□□□□□ -0.2
SCARB1-204ENST00000535005 CTIFO43310 598 aaKnown RBP13.83□□□□□ -0.2
SCARB1-204ENST00000535005 PSMD10O75832 226 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 MARCKSP29966 332 aaPredicted RBP13.83□□□□□ -0.2
SCARB1-204ENST00000535005 FXR2P51116 673 aaKnown RBP eCLIP13.83□□□□□ -0.2
SCARB1-204ENST00000535005 ACVR2BQ13705 512 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 IL17AQ16552 155 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 MFSD14CQ5VZR4 134 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 DTHD1Q6ZMT9 781 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 SEPT14Q6ZU15 432 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 PDCL2Q8N4E4 241 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 KRI1Q8N9T8 703 aaKnown RBP13.83□□□□□ -0.2
SCARB1-204ENST00000535005 ZNF579Q8NAF0 562 aaKnown RBP13.83□□□□□ -0.2
SCARB1-204ENST00000535005 KIAA1524Q8TCG1 905 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 SCFD2Q8WU76 684 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 TRIB2Q92519 343 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 GDPD2Q9HCC8 539 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 TBC1D22BQ9NU19 505 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 PCDHA12Q9UN75 941 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 NFASCO94856 1347 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 MARCH6O60337 910 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 CUTAO60888 179 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 ATP9AO75110 1047 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 HSPA1AP0DMV8 641 aaKnown RBP13.83□□□□□ -0.2
SCARB1-204ENST00000535005 HSPA1BP0DMV9 641 aaKnown RBP13.83□□□□□ -0.2
SCARB1-204ENST00000535005 KCNA2P16389 499 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 CYP2C19P33261 490 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 TXKP42681 527 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 CTCFP49711 727 aaPredicted RBP13.83□□□□□ -0.2
SCARB1-204ENST00000535005 ITGB3BPQ13352 177 aaPredicted RBP13.83□□□□□ -0.2
SCARB1-204ENST00000535005 PDIA5Q14554 519 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 AXDND1Q5T1B0 1012 aaPredicted RBP13.83□□□□□ -0.2
SCARB1-204ENST00000535005 IQSEC1Q6DN90 963 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 B3GNT9Q6UX72 402 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 EEPD1Q7L9B9 569 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 FBXO16Q8IX29 292 aaPredicted RBP13.83□□□□□ -0.2
SCARB1-204ENST00000535005 GIMAP8Q8ND71 665 aaPredicted RBP13.83□□□□□ -0.2
SCARB1-204ENST00000535005 RAET1EQ8TD07 263 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 FUCA2Q9BTY2 467 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 TTC12Q9H892 705 aaPredicted RBP13.83□□□□□ -0.2
SCARB1-204ENST00000535005 DDX41Q9UJV9 622 aaKnown RBP13.83□□□□□ -0.2
SCARB1-204ENST00000535005 PCDHA7Q9UN72 937 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 TRIM17Q9Y577 477 aa13.83□□□□□ -0.2
SCARB1-204ENST00000535005 MCM3APO60318 1980 aa13.82□□□□□ -0.2
SCARB1-204ENST00000535005 ADCY3O60266 1144 aa13.82□□□□□ -0.2
SCARB1-204ENST00000535005 ZNF865P0CJ78 1059 aaPredicted RBP13.82□□□□□ -0.2
SCARB1-204ENST00000535005 LONP1P36776 959 aaKnown RBP13.82□□□□□ -0.2
SCARB1-204ENST00000535005 ME1P48163 572 aa13.82□□□□□ -0.2
SCARB1-204ENST00000535005 TTLL4Q14679 1199 aa13.82□□□□□ -0.2
SCARB1-204ENST00000535005 LRCH2Q5VUJ6 765 aa13.82□□□□□ -0.2
SCARB1-204ENST00000535005 ADALQ6DHV7 355 aa13.82□□□□□ -0.2
SCARB1-204ENST00000535005 SLAIN1Q8ND83 568 aa13.82□□□□□ -0.2
SCARB1-204ENST00000535005 PDGFCQ9NRA1 345 aa13.82□□□□□ -0.2
SCARB1-204ENST00000535005 VAV3Q9UKW4 847 aa13.82□□□□□ -0.2
SCARB1-204ENST00000535005 KIAA1217Q5T5P2 1943 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms