RNA–Protein interactions for RNA: ENST00000534290.1

NCAPD3-212, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 2

Gene NCAPD3, Length 352 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-212ENST00000534290 NOVP48745 357 aa12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 NAPAP54920 295 aa12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 NONOQ15233 471 aaKnown RBP eCLIP12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 TRIM60Q495X7 471 aa12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 C9orf50Q5SZB4 431 aa12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 TMEM179Q6ZVK1 233 aa12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 HEATR3Q7Z4Q2 680 aa12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 FILIP1Q7Z7B0 1213 aa12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 NCAPG2Q86XI2 1143 aa12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 SIAH1Q8IUQ4 282 aa12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 ABRAQ8N0Z2 381 aa12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 MB21D1Q8N884 522 aa12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 RASSF8Q8NHQ8 419 aa12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 SPATA20Q8TB22 786 aa12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 DHX58Q96C10 678 aa12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 CDX2Q99626 313 aaPredicted RBP12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 XPO4Q9C0E2 1151 aaKnown RBP12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 ZMYND12Q9H0C1 365 aa12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 SEMA6BQ9H3T3 888 aa12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 MAN1B1Q9UKM7 699 aa12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 SPTBN5Q9NRC6 3674 aaKnown RBP12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 PLIN4Q96Q06 1357 aa12.05□□□□□ -0.48
NCAPD3-212ENST00000534290 ZSCAN12O43309 604 aa12.04□□□□□ -0.48
NCAPD3-212ENST00000534290 ACTN4O43707 911 aaKnown RBP12.04□□□□□ -0.48
NCAPD3-212ENST00000534290 FLOT1O75955 427 aa12.04□□□□□ -0.48
NCAPD3-212ENST00000534290 FCER1AP12319 257 aa12.04□□□□□ -0.48
NCAPD3-212ENST00000534290 MCM7P33993 719 aa12.04□□□□□ -0.48
NCAPD3-212ENST00000534290 SNX17Q15036 470 aa12.04□□□□□ -0.48
NCAPD3-212ENST00000534290 LRRC41Q15345 812 aa12.04□□□□□ -0.48
NCAPD3-212ENST00000534290 SPATA1Q5VX52 437 aa12.04□□□□□ -0.48
NCAPD3-212ENST00000534290 RRAGBQ5VZM2 374 aa12.04□□□□□ -0.48
NCAPD3-212ENST00000534290 TMC6Q7Z403 805 aa12.04□□□□□ -0.48
NCAPD3-212ENST00000534290 FCHSD1Q86WN1 690 aa12.04□□□□□ -0.48
NCAPD3-212ENST00000534290 TEX2Q8IWB9 1127 aa12.04□□□□□ -0.48
NCAPD3-212ENST00000534290 SPICE1Q8N0Z3 855 aa12.04□□□□□ -0.48
NCAPD3-212ENST00000534290 MYRIPQ8NFW9 859 aa12.04□□□□□ -0.48
NCAPD3-212ENST00000534290 SYMPKQ92797 1274 aaKnown RBP12.04□□□□□ -0.48
NCAPD3-212ENST00000534290 PAGE5Q96GU1 130 aa12.04□□□□□ -0.48
NCAPD3-212ENST00000534290 MAML3Q96JK9 1138 aa12.04□□□□□ -0.48
NCAPD3-212ENST00000534290 KCNF1Q9H3M0 494 aa12.04□□□□□ -0.48
NCAPD3-212ENST00000534290 UQCRHLA0A096LP55 91 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 TRIM43BA6NCK2 446 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 SMCO2A6NFE2 343 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 SLC26A4O43511 780 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 UQCRHP07919 91 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 STAT6P42226 847 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 MRPL12P52815 198 aaKnown RBP12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 TLE2Q04725 743 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 NCAPHQ15003 741 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 PTPN14Q15678 1187 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 TMEM266Q2M3C6 531 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 C1orf53Q5VUE5 145 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 SAMD1Q6SPF0 538 aaPredicted RBP12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 SH3RF1Q7Z6J0 888 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 PDILTQ8N807 584 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 SLC44A5Q8NCS7 719 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 CACTINQ8WUQ7 758 aaKnown RBP12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 TRIM43Q96BQ3 446 aaPredicted RBP12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 ATG4CQ96DT6 458 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 CCSER1Q9C0I3 900 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 SH2D4AQ9H788 454 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 ARHGEF10LQ9HCE6 1279 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 MTMR4Q9NYA4 1195 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 PCDHA6Q9UN73 950 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 TMX2Q9Y320 296 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 PCDHA8Q9Y5H6 950 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 STK24Q9Y6E0 443 aa12.03□□□□□ -0.48
NCAPD3-212ENST00000534290 hCG_1642624A0A1W2PR95 340 aa12.02□□□□□ -0.49
NCAPD3-212ENST00000534290 STXBP3O00186 592 aa12.02□□□□□ -0.49
NCAPD3-212ENST00000534290 SLC25A27O95847 323 aa12.02□□□□□ -0.49
NCAPD3-212ENST00000534290 TNNT1P13805 278 aa12.02□□□□□ -0.49
NCAPD3-212ENST00000534290 AKR1B1P15121 316 aa12.02□□□□□ -0.49
NCAPD3-212ENST00000534290 SMAD3P84022 425 aaKnown RBP12.02□□□□□ -0.49
NCAPD3-212ENST00000534290 TMEM132BQ14DG7 1078 aa12.02□□□□□ -0.49
NCAPD3-212ENST00000534290 SPECC1Q5M775 1068 aa12.02□□□□□ -0.49
NCAPD3-212ENST00000534290 ISM2Q6H9L7 571 aa12.02□□□□□ -0.49
NCAPD3-212ENST00000534290 NEK8Q86SG6 692 aa12.02□□□□□ -0.49
NCAPD3-212ENST00000534290 CLEC10AQ8IUN9 316 aa12.02□□□□□ -0.49
NCAPD3-212ENST00000534290 NOC3LQ8WTT2 800 aaKnown RBP12.02□□□□□ -0.49
NCAPD3-212ENST00000534290 ERCC4Q92889 916 aaPredicted RBP12.02□□□□□ -0.49
NCAPD3-212ENST00000534290 CALML4Q96GE6 196 aa12.02□□□□□ -0.49
NCAPD3-212ENST00000534290 RIOX1Q9H6W3 641 aa12.02□□□□□ -0.49
NCAPD3-212ENST00000534290 VCPKMTQ9H867 229 aa12.02□□□□□ -0.49
NCAPD3-212ENST00000534290 XPNPEP3Q9NQH7 507 aa12.02□□□□□ -0.49
NCAPD3-212ENST00000534290 PDLIM7Q9NR12 457 aa12.02□□□□□ -0.49
NCAPD3-212ENST00000534290 FANCLQ9NW38 375 aa12.02□□□□□ -0.49
NCAPD3-212ENST00000534290 NRBP1Q9UHY1 535 aa12.02□□□□□ -0.49
NCAPD3-212ENST00000534290 PYCARDQ9ULZ3 195 aa12.02□□□□□ -0.49
NCAPD3-212ENST00000534290 PNMA6FA0A0J9YX94 578 aa12.01□□□□□ -0.49
NCAPD3-212ENST00000534290 RRP9O43818 475 aaKnown RBP12.01□□□□□ -0.49
NCAPD3-212ENST00000534290 RARBP10826 455 aa12.01□□□□□ -0.49
NCAPD3-212ENST00000534290 GTF2F1P35269 517 aaKnown RBP eCLIP12.01□□□□□ -0.49
NCAPD3-212ENST00000534290 AFMP43652 599 aa12.01□□□□□ -0.49
NCAPD3-212ENST00000534290 ICA1Q05084 483 aa12.01□□□□□ -0.49
NCAPD3-212ENST00000534290 DPYDQ12882 1025 aa12.01□□□□□ -0.49
NCAPD3-212ENST00000534290 KCNB1Q14721 858 aa12.01□□□□□ -0.49
NCAPD3-212ENST00000534290 NPY5RQ15761 445 aa12.01□□□□□ -0.49
NCAPD3-212ENST00000534290 ZNF658Q5TYW1 1059 aaPredicted RBP12.01□□□□□ -0.49
NCAPD3-212ENST00000534290 WWC2Q6AWC2 1192 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms