RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 HAS3O00219 553 aa21.73■■□□□ 1.07
LRRK1-210ENST00000534045 MAFGO15525 162 aa21.73■■□□□ 1.07
LRRK1-210ENST00000534045 EPB41L2O43491 1005 aaKnown RBP21.73■■□□□ 1.07
LRRK1-210ENST00000534045 PARNO95453 639 aaKnown RBP21.73■■□□□ 1.07
LRRK1-210ENST00000534045 CDC27P30260 824 aa21.73■■□□□ 1.07
LRRK1-210ENST00000534045 PTK7Q13308 1070 aa21.73■■□□□ 1.07
LRRK1-210ENST00000534045 MTMR1Q13613 665 aa21.73■■□□□ 1.07
LRRK1-210ENST00000534045 UTP14CQ5TAP6 766 aaKnown RBP21.73■■□□□ 1.07
LRRK1-210ENST00000534045 TEX2Q8IWB9 1127 aa21.73■■□□□ 1.07
LRRK1-210ENST00000534045 C16orf70Q9BSU1 422 aa21.73■■□□□ 1.07
LRRK1-210ENST00000534045 PBX4Q9BYU1 374 aa21.73■■□□□ 1.07
LRRK1-210ENST00000534045 TTYH1Q9H313 450 aaPredicted RBP21.73■■□□□ 1.07
LRRK1-210ENST00000534045 RIC8AQ9NPQ8 531 aa21.73■■□□□ 1.07
LRRK1-210ENST00000534045 ZNF215Q9UL58 517 aaPredicted RBP21.73■■□□□ 1.07
LRRK1-210ENST00000534045 TANC1Q9C0D5 1861 aa21.73■■□□□ 1.07
LRRK1-210ENST00000534045 C17orf102A2RUQ5 167 aa21.72■■□□□ 1.07
LRRK1-210ENST00000534045 LGALS2P05162 132 aa21.72■■□□□ 1.07
LRRK1-210ENST00000534045 GNAT1P11488 350 aa21.72■■□□□ 1.07
LRRK1-210ENST00000534045 SELPP16109 830 aa21.72■■□□□ 1.07
LRRK1-210ENST00000534045 ZNF76P36508 570 aa21.72■■□□□ 1.07
LRRK1-210ENST00000534045 LRRC8DQ7L1W4 858 aa21.72■■□□□ 1.07
LRRK1-210ENST00000534045 CCDC12Q8WUD4 166 aaPredicted RBP21.72■■□□□ 1.07
LRRK1-210ENST00000534045 GPR20Q99678 358 aa21.72■■□□□ 1.07
LRRK1-210ENST00000534045 BCAS3Q9H6U6 928 aa21.72■■□□□ 1.07
LRRK1-210ENST00000534045 SLC28A3Q9HAS3 691 aa21.72■■□□□ 1.07
LRRK1-210ENST00000534045 BARHL2Q9NY43 387 aa21.72■■□□□ 1.07
LRRK1-210ENST00000534045 ATP2A2P16615 1042 aaKnown RBP21.71■■□□□ 1.07
LRRK1-210ENST00000534045 PBX2P40425 430 aa21.71■■□□□ 1.07
LRRK1-210ENST00000534045 SEMA3FQ13275 785 aa21.71■■□□□ 1.07
LRRK1-210ENST00000534045 MYLIPQ8WY64 445 aa21.71■■□□□ 1.07
LRRK1-210ENST00000534045 ATP6V0A1Q93050 837 aa21.71■■□□□ 1.07
LRRK1-210ENST00000534045 PKD2L1Q9P0L9 805 aa21.71■■□□□ 1.07
LRRK1-210ENST00000534045 CYP46A1Q9Y6A2 500 aa21.71■■□□□ 1.07
LRRK1-210ENST00000534045 STXBP3O00186 592 aa21.7■■□□□ 1.06
LRRK1-210ENST00000534045 CKBP12277 381 aa21.7■■□□□ 1.06
LRRK1-210ENST00000534045 FOSL2P15408 326 aa21.7■■□□□ 1.06
LRRK1-210ENST00000534045 ZNF200P98182 395 aaPredicted RBP21.7■■□□□ 1.06
LRRK1-210ENST00000534045 FUT2Q10981 343 aa21.7■■□□□ 1.06
LRRK1-210ENST00000534045 RUFY3Q7L099 469 aa21.7■■□□□ 1.06
LRRK1-210ENST00000534045 SEPT1Q8WYJ6 367 aa21.7■■□□□ 1.06
LRRK1-210ENST00000534045 JADE2Q9NQC1 790 aa21.7■■□□□ 1.06
LRRK1-210ENST00000534045 FAM217BQ9NTX9 383 aaPredicted RBP21.7■■□□□ 1.06
LRRK1-210ENST00000534045 UBIAD1Q9Y5Z9 338 aa21.7■■□□□ 1.06
LRRK1-210ENST00000534045 SCG2P13521 617 aa21.69■■□□□ 1.06
LRRK1-210ENST00000534045 ITGB5P18084 799 aa21.69■■□□□ 1.06
LRRK1-210ENST00000534045 AP3B2Q13367 1082 aa21.69■■□□□ 1.06
LRRK1-210ENST00000534045 PFKFB3Q16875 520 aaPredicted RBP21.69■■□□□ 1.06
LRRK1-210ENST00000534045 FBXL16Q8N461 479 aa21.69■■□□□ 1.06
LRRK1-210ENST00000534045 C6orf50Q9HD87 102 aa21.69■■□□□ 1.06
LRRK1-210ENST00000534045 KIF28PB7ZC32 967 aa21.68■■□□□ 1.06
LRRK1-210ENST00000534045 ATP9AO75110 1047 aa21.68■■□□□ 1.06
LRRK1-210ENST00000534045 SMIM10L2AP0DMW4 78 aa21.68■■□□□ 1.06
LRRK1-210ENST00000534045 SMIM10L2BP0DMW5 78 aa21.68■■□□□ 1.06
LRRK1-210ENST00000534045 THPOP40225 353 aa21.68■■□□□ 1.06
LRRK1-210ENST00000534045 KCNJ6P48051 423 aa21.68■■□□□ 1.06
LRRK1-210ENST00000534045 GRIN2CQ14957 1233 aa21.68■■□□□ 1.06
LRRK1-210ENST00000534045 GLG1Q92896 1179 aa21.68■■□□□ 1.06
LRRK1-210ENST00000534045 GAS2L1Q99501 681 aaPredicted RBP21.68■■□□□ 1.06
LRRK1-210ENST00000534045 MXRA8Q9BRK3 442 aa21.68■■□□□ 1.06
LRRK1-210ENST00000534045 SDF4Q9BRK5 362 aa21.68■■□□□ 1.06
LRRK1-210ENST00000534045 ANO3Q9BYT9 981 aa21.68■■□□□ 1.06
LRRK1-210ENST00000534045 RNPEPQ9H4A4 650 aa21.68■■□□□ 1.06
LRRK1-210ENST00000534045 SCN5AQ14524 2016 aa21.67■■□□□ 1.06
LRRK1-210ENST00000534045 TRIP12Q14669 1992 aaPredicted RBP21.67■■□□□ 1.06
LRRK1-210ENST00000534045 PRPF3O43395 683 aaKnown RBP21.67■■□□□ 1.06
LRRK1-210ENST00000534045 GNA11P29992 359 aa21.67■■□□□ 1.06
LRRK1-210ENST00000534045 TCF7P36402 384 aaPredicted RBP21.67■■□□□ 1.06
LRRK1-210ENST00000534045 CCT2P78371 535 aaKnown RBP21.67■■□□□ 1.06
LRRK1-210ENST00000534045 MCTP2Q6DN12 878 aa21.67■■□□□ 1.06
LRRK1-210ENST00000534045 TYW1BQ6NUM6 668 aa21.67■■□□□ 1.06
LRRK1-210ENST00000534045 PHOSPHO2Q8TCD6 241 aa21.67■■□□□ 1.06
LRRK1-210ENST00000534045 DHX38Q92620 1227 aaKnown RBP21.67■■□□□ 1.06
LRRK1-210ENST00000534045 PGBD1Q96JS3 809 aa21.67■■□□□ 1.06
LRRK1-210ENST00000534045 CTAGE1Q96RT6 745 aa21.67■■□□□ 1.06
LRRK1-210ENST00000534045 NKX2-4Q9H2Z4 354 aa21.67■■□□□ 1.06
LRRK1-210ENST00000534045 ZSWIM6Q9HCJ5 1215 aa21.67■■□□□ 1.06
LRRK1-210ENST00000534045 GBF1Q92538 1859 aa21.66■■□□□ 1.06
LRRK1-210ENST00000534045 BAIAP3O94812 1187 aa21.66■■□□□ 1.06
LRRK1-210ENST00000534045 KCNA2P16389 499 aa21.66■■□□□ 1.06
LRRK1-210ENST00000534045 RABGGTBP53611 331 aa21.66■■□□□ 1.06
LRRK1-210ENST00000534045 RBL2Q08999 1139 aa21.66■■□□□ 1.06
LRRK1-210ENST00000534045 ZNF618Q5T7W0 954 aa21.66■■□□□ 1.06
LRRK1-210ENST00000534045 JAKMIP3Q5VZ66 844 aa21.66■■□□□ 1.06
LRRK1-210ENST00000534045 MAFAQ8NHW3 353 aaPredicted RBP21.66■■□□□ 1.06
LRRK1-210ENST00000534045 TNPO1Q92973 898 aaKnown RBP21.66■■□□□ 1.06
LRRK1-210ENST00000534045 SLC9A7Q96T83 725 aa21.66■■□□□ 1.06
LRRK1-210ENST00000534045 SLC26A6Q9BXS9 759 aa21.66■■□□□ 1.06
LRRK1-210ENST00000534045 AGXT2Q9BYV1 514 aa21.66■■□□□ 1.06
LRRK1-210ENST00000534045 AZI2Q9H6S1 392 aa21.66■■□□□ 1.06
LRRK1-210ENST00000534045 KCNH7Q9NS40 1196 aa21.66■■□□□ 1.06
LRRK1-210ENST00000534045 SETD4Q9NVD3 440 aa21.66■■□□□ 1.06
LRRK1-210ENST00000534045 TMEM260Q9NX78 707 aa21.66■■□□□ 1.06
LRRK1-210ENST00000534045 PCDHA11Q9Y5I1 949 aa21.66■■□□□ 1.06
LRRK1-210ENST00000534045 RSPH10B2B2RC85 870 aa21.65■■□□□ 1.06
LRRK1-210ENST00000534045 CPLX1O14810 134 aa21.65■■□□□ 1.06
LRRK1-210ENST00000534045 TREHO43280 583 aa21.65■■□□□ 1.06
LRRK1-210ENST00000534045 RSPH10BP0C881 870 aa21.65■■□□□ 1.06
LRRK1-210ENST00000534045 PDIA3P30101 505 aaKnown RBP21.65■■□□□ 1.06
LRRK1-210ENST00000534045 ARHGAP4P98171 946 aa21.65■■□□□ 1.06
LRRK1-210ENST00000534045 CEP55Q53EZ4 464 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms