RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 GGPS1O95749 300 aa17.63■□□□□ 0.41
CTTN-215ENST00000533931 HOXD8P13378 290 aaPredicted RBP17.63■□□□□ 0.41
CTTN-215ENST00000533931 PRPHP41219 470 aa17.63■□□□□ 0.41
CTTN-215ENST00000533931 GJA8P48165 433 aa17.63■□□□□ 0.41
CTTN-215ENST00000533931 KRT76Q01546 638 aa17.63■□□□□ 0.41
CTTN-215ENST00000533931 ITGB3BPQ13352 177 aaPredicted RBP17.63■□□□□ 0.41
CTTN-215ENST00000533931 CALCRLQ16602 461 aa17.63■□□□□ 0.41
CTTN-215ENST00000533931 RNF180Q86T96 592 aa17.63■□□□□ 0.41
CTTN-215ENST00000533931 ANKLE1Q8NAG6 615 aa17.63■□□□□ 0.41
CTTN-215ENST00000533931 ARRDC4Q8NCT1 418 aa17.63■□□□□ 0.41
CTTN-215ENST00000533931 OR6J1Q8NGC5 347 aa17.63■□□□□ 0.41
CTTN-215ENST00000533931 PPTC7Q8NI37 304 aa17.63■□□□□ 0.41
CTTN-215ENST00000533931 ZNF396Q96N95 335 aaPredicted RBP17.63■□□□□ 0.41
CTTN-215ENST00000533931 MTMR9Q96QG7 549 aa17.63■□□□□ 0.41
CTTN-215ENST00000533931 JPH1Q9HDC5 661 aaPredicted RBP17.63■□□□□ 0.41
CTTN-215ENST00000533931 ZDHHC9Q9Y397 364 aa17.63■□□□□ 0.41
CTTN-215ENST00000533931 WNT7AO00755 349 aa17.62■□□□□ 0.41
CTTN-215ENST00000533931 PSMD10O75832 226 aa17.62■□□□□ 0.41
CTTN-215ENST00000533931 OR52Z1P0C646 297 aa17.62■□□□□ 0.41
CTTN-215ENST00000533931 MCM7P33993 719 aa17.62■□□□□ 0.41
CTTN-215ENST00000533931 LRCH2Q5VUJ6 765 aa17.62■□□□□ 0.41
CTTN-215ENST00000533931 ARL6IP4Q66PJ3 421 aaKnown RBP17.62■□□□□ 0.41
CTTN-215ENST00000533931 ZNF746Q6NUN9 644 aaPredicted RBP17.62■□□□□ 0.41
CTTN-215ENST00000533931 POTEDQ86YR6 584 aa17.62■□□□□ 0.41
CTTN-215ENST00000533931 SMAP1Q8IYB5 467 aaPredicted RBP17.62■□□□□ 0.41
CTTN-215ENST00000533931 KLHDC9Q8NEP7 349 aa17.62■□□□□ 0.41
CTTN-215ENST00000533931 RDM1Q8NG50 284 aa17.62■□□□□ 0.41
CTTN-215ENST00000533931 U2AF1L4Q8WU68 220 aaKnown RBP17.62■□□□□ 0.41
CTTN-215ENST00000533931 HAS1Q92839 578 aa17.62■□□□□ 0.41
CTTN-215ENST00000533931 DEFB118Q96PH6 123 aa17.62■□□□□ 0.41
CTTN-215ENST00000533931 TSEN34Q9BSV6 310 aaKnown RBP17.62■□□□□ 0.41
CTTN-215ENST00000533931 MLXIPQ9HAP2 919 aa17.62■□□□□ 0.41
CTTN-215ENST00000533931 POLR3EQ9NVU0 708 aa17.62■□□□□ 0.41
CTTN-215ENST00000533931 SLC9A2Q9UBY0 812 aa17.62■□□□□ 0.41
CTTN-215ENST00000533931 PCDHB6Q9Y5E3 794 aa17.62■□□□□ 0.41
CTTN-215ENST00000533931 DYNC1LI2O43237 492 aaPredicted RBP17.61■□□□□ 0.41
CTTN-215ENST00000533931 ZEB2O60315 1214 aa17.61■□□□□ 0.41
CTTN-215ENST00000533931 GAS7O60861 476 aa17.61■□□□□ 0.41
CTTN-215ENST00000533931 PPFIA4O75335 1185 aa17.61■□□□□ 0.41
CTTN-215ENST00000533931 ATP2B1P20020 1258 aa17.61■□□□□ 0.41
CTTN-215ENST00000533931 SFNP31947 248 aa17.61■□□□□ 0.41
CTTN-215ENST00000533931 ATP2C1P98194 919 aaPredicted RBP17.61■□□□□ 0.41
CTTN-215ENST00000533931 PPP2R5CQ13362 524 aa17.61■□□□□ 0.41
CTTN-215ENST00000533931 ZNF174Q15697 407 aa17.61■□□□□ 0.41
CTTN-215ENST00000533931 FSCN1Q16658 493 aaKnown RBP17.61■□□□□ 0.41
CTTN-215ENST00000533931 B3GNT9Q6UX72 402 aa17.61■□□□□ 0.41
CTTN-215ENST00000533931 CYFIP1Q7L576 1253 aa17.61■□□□□ 0.41
CTTN-215ENST00000533931 C4orf32Q8N8J7 132 aa17.61■□□□□ 0.41
CTTN-215ENST00000533931 PCSK9Q8NBP7 692 aaKnown RBP17.61■□□□□ 0.41
CTTN-215ENST00000533931 TEKT3Q9BXF9 490 aa17.61■□□□□ 0.41
CTTN-215ENST00000533931 CHMP5Q9NZZ3 219 aa17.61■□□□□ 0.41
CTTN-215ENST00000533931 DNM1LO00429 736 aa17.6■□□□□ 0.41
CTTN-215ENST00000533931 CTAGE5O15320 804 aa17.6■□□□□ 0.41
CTTN-215ENST00000533931 MARCH6O60337 910 aa17.6■□□□□ 0.41
CTTN-215ENST00000533931 NASPP49321 788 aaPredicted RBP17.6■□□□□ 0.41
CTTN-215ENST00000533931 JAK3P52333 1124 aa17.6■□□□□ 0.41
CTTN-215ENST00000533931 PTGDRQ13258 359 aa17.6■□□□□ 0.41
CTTN-215ENST00000533931 TMEM63BQ5T3F8 832 aa17.6■□□□□ 0.41
CTTN-215ENST00000533931 ANO1Q5XXA6 986 aa17.6■□□□□ 0.41
CTTN-215ENST00000533931 COPS5Q92905 334 aa17.6■□□□□ 0.41
CTTN-215ENST00000533931 ABHD8Q96I13 439 aa17.6■□□□□ 0.41
CTTN-215ENST00000533931 SPATA33Q96N06 139 aa17.6■□□□□ 0.41
CTTN-215ENST00000533931 VAV3Q9UKW4 847 aa17.6■□□□□ 0.41
CTTN-215ENST00000533931 CFAP45Q9UL16 551 aa17.6■□□□□ 0.41
CTTN-215ENST00000533931 ELP1O95163 1332 aa17.6■□□□□ 0.41
CTTN-215ENST00000533931 MOXD2PA6NHM9 499 aa17.59■□□□□ 0.41
CTTN-215ENST00000533931 NOP56O00567 594 aaKnown RBP17.59■□□□□ 0.41
CTTN-215ENST00000533931 ATG7O95352 703 aa17.59■□□□□ 0.41
CTTN-215ENST00000533931 YEATS4O95619 227 aa17.59■□□□□ 0.41
CTTN-215ENST00000533931 MMP3P08254 477 aa17.59■□□□□ 0.41
CTTN-215ENST00000533931 C6orf222P0C671 652 aaPredicted RBP17.59■□□□□ 0.41
CTTN-215ENST00000533931 FXR2P51116 673 aaKnown RBP eCLIP17.59■□□□□ 0.412e-7■■□□□ 13.5
CTTN-215ENST00000533931 LRRC41Q15345 812 aa17.59■□□□□ 0.41
CTTN-215ENST00000533931 DGKDQ16760 1214 aa17.59■□□□□ 0.41
CTTN-215ENST00000533931 HSDL1Q3SXM5 330 aa17.59■□□□□ 0.41
CTTN-215ENST00000533931 GJC2Q5T442 439 aaPredicted RBP17.59■□□□□ 0.41
CTTN-215ENST00000533931 CCSAPQ6IQ19 270 aaPredicted RBP17.59■□□□□ 0.41
CTTN-215ENST00000533931 SEPT1Q8WYJ6 367 aa17.59■□□□□ 0.41
CTTN-215ENST00000533931 LENG1Q96BZ8 264 aaPredicted RBP17.59■□□□□ 0.41
CTTN-215ENST00000533931 GPR20Q99678 358 aa17.59■□□□□ 0.41
CTTN-215ENST00000533931 RAB34Q9BZG1 259 aa17.59■□□□□ 0.41
CTTN-215ENST00000533931 TMEM60Q9H2L4 133 aa17.59■□□□□ 0.41
CTTN-215ENST00000533931 PCDHA12Q9UN75 941 aa17.59■□□□□ 0.41
CTTN-215ENST00000533931 STK24Q9Y6E0 443 aa17.59■□□□□ 0.41
CTTN-215ENST00000533931 EMSYQ7Z589 1322 aa17.58■□□□□ 0.4
CTTN-215ENST00000533931 POTEFA5A3E0 1075 aa17.58■□□□□ 0.4
CTTN-215ENST00000533931 WDR64B1ANS9 1081 aa17.58■□□□□ 0.4
CTTN-215ENST00000533931 CABYRO75952 493 aa17.58■□□□□ 0.4
CTTN-215ENST00000533931 PGK1P00558 417 aa17.58■□□□□ 0.4
CTTN-215ENST00000533931 ACTR2P61160 394 aa17.58■□□□□ 0.4
CTTN-215ENST00000533931 SPIRE1Q08AE8 756 aa17.58■□□□□ 0.4
CTTN-215ENST00000533931 NBR1Q14596 966 aa17.58■□□□□ 0.4
CTTN-215ENST00000533931 SF3A1Q15459 793 aaKnown RBP17.58■□□□□ 0.4
CTTN-215ENST00000533931 TMEM266Q2M3C6 531 aa17.58■□□□□ 0.4
CTTN-215ENST00000533931 TNS4Q8IZW8 715 aa17.58■□□□□ 0.4
CTTN-215ENST00000533931 AFG1LQ8WV93 481 aa17.58■□□□□ 0.4
CTTN-215ENST00000533931 USP28Q96RU2 1077 aa17.58■□□□□ 0.4
CTTN-215ENST00000533931 TTC12Q9H892 705 aaPredicted RBP17.58■□□□□ 0.4
CTTN-215ENST00000533931 PKD2L1Q9P0L9 805 aa17.58■□□□□ 0.4
CTTN-215ENST00000533931 FRMPD3Q5JV73 1810 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms