RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 PTPN11Q06124 597 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-227ENST00000533909 SEMA3FQ13275 785 aa15.24■□□□□ 0.03
CAPN1-227ENST00000533909 TRIM29Q14134 588 aa15.24■□□□□ 0.03
CAPN1-227ENST00000533909 MFSD10Q14728 455 aa15.24■□□□□ 0.03
CAPN1-227ENST00000533909 RABEP1Q15276 862 aa15.24■□□□□ 0.03
CAPN1-227ENST00000533909 BLIDQ8IZY5 108 aa15.24■□□□□ 0.03
CAPN1-227ENST00000533909 RASGRP4Q8TDF6 673 aa15.24■□□□□ 0.03
CAPN1-227ENST00000533909 PPP1R12CQ9BZL4 782 aa15.24■□□□□ 0.03
CAPN1-227ENST00000533909 HIPK3Q9H422 1215 aa15.24■□□□□ 0.03
CAPN1-227ENST00000533909 BRMS1Q9HCU9 246 aa15.24■□□□□ 0.03
CAPN1-227ENST00000533909 KCNH7Q9NS40 1196 aa15.24■□□□□ 0.03
CAPN1-227ENST00000533909 TRMT13Q9NUP7 481 aaKnown RBP15.24■□□□□ 0.03
CAPN1-227ENST00000533909 PCDH10Q9P2E7 1040 aa15.24■□□□□ 0.03
CAPN1-227ENST00000533909 TBX21Q9UL17 535 aa15.24■□□□□ 0.03
CAPN1-227ENST00000533909 ZNF215Q9UL58 517 aaPredicted RBP15.24■□□□□ 0.03
CAPN1-227ENST00000533909 MYH7BA7E2Y1 1941 aa15.23■□□□□ 0.03
CAPN1-227ENST00000533909 B4GALT4O60513 344 aa15.23■□□□□ 0.03
CAPN1-227ENST00000533909 F2P00734 622 aa15.23■□□□□ 0.03
CAPN1-227ENST00000533909 CD4P01730 458 aa15.23■□□□□ 0.03
CAPN1-227ENST00000533909 KCNA2P16389 499 aa15.23■□□□□ 0.03
CAPN1-227ENST00000533909 KIAA0753Q2KHM9 967 aa15.23■□□□□ 0.03
CAPN1-227ENST00000533909 UTP14CQ5TAP6 766 aaKnown RBP15.23■□□□□ 0.03
CAPN1-227ENST00000533909 PLA2G4DQ86XP0 818 aa15.23■□□□□ 0.03
CAPN1-227ENST00000533909 TMEM199Q8N511 208 aa15.23■□□□□ 0.03
CAPN1-227ENST00000533909 PPP1R13LQ8WUF5 828 aa15.23■□□□□ 0.03
CAPN1-227ENST00000533909 ZSCAN31Q96LW9 406 aaPredicted RBP15.23■□□□□ 0.03
CAPN1-227ENST00000533909 AIFM3Q96NN9 605 aa15.23■□□□□ 0.03
CAPN1-227ENST00000533909 JPH1Q9HDC5 661 aaPredicted RBP15.23■□□□□ 0.03
CAPN1-227ENST00000533909 H3BRB1 525 aa15.22■□□□□ 0.03
CAPN1-227ENST00000533909 ATP9AO75110 1047 aa15.22■□□□□ 0.03
CAPN1-227ENST00000533909 LARGE1O95461 756 aa15.22■□□□□ 0.03
CAPN1-227ENST00000533909 LGALS2P05162 132 aa15.22■□□□□ 0.03
CAPN1-227ENST00000533909 HOXD8P13378 290 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-227ENST00000533909 SETQ01105 290 aaPredicted RBP15.22■□□□□ 0.03
CAPN1-227ENST00000533909 PTGISQ16647 500 aa15.22■□□□□ 0.03
CAPN1-227ENST00000533909 NIPA1Q7RTP0 329 aa15.22■□□□□ 0.03
CAPN1-227ENST00000533909 TDHQ8IZJ6 230 aa15.22■□□□□ 0.03
CAPN1-227ENST00000533909 CCDC155Q8N6L0 562 aa15.22■□□□□ 0.03
CAPN1-227ENST00000533909 CYP2W1Q8TAV3 490 aa15.22■□□□□ 0.03
CAPN1-227ENST00000533909 KAT2BQ92831 832 aa15.22■□□□□ 0.03
CAPN1-227ENST00000533909 GPR20Q99678 358 aa15.22■□□□□ 0.03
CAPN1-227ENST00000533909 TUT1Q9H6E5 874 aaKnown RBP15.22■□□□□ 0.03
CAPN1-227ENST00000533909 BCAS3Q9H6U6 928 aa15.22■□□□□ 0.03
CAPN1-227ENST00000533909 KCNJ14Q9UNX9 436 aa15.22■□□□□ 0.03
CAPN1-227ENST00000533909 CCDC194A0A1B0GVG4 234 aa15.21■□□□□ 0.03
CAPN1-227ENST00000533909 MEIS1O00470 390 aa15.21■□□□□ 0.03
CAPN1-227ENST00000533909 CTDNEP1O95476 244 aa15.21■□□□□ 0.03
CAPN1-227ENST00000533909 CYP3A4P08684 503 aa15.21■□□□□ 0.03
CAPN1-227ENST00000533909 ARP10275 920 aa15.21■□□□□ 0.03
CAPN1-227ENST00000533909 CYP2C9P11712 490 aa15.21■□□□□ 0.03
CAPN1-227ENST00000533909 TCF7P36402 384 aaPredicted RBP15.21■□□□□ 0.03
CAPN1-227ENST00000533909 PPIGQ13427 754 aaKnown RBP eCLIP15.21■□□□□ 0.033e-6■■■□□ 18.1
CAPN1-227ENST00000533909 PRR16Q569H4 304 aa15.21■□□□□ 0.03
CAPN1-227ENST00000533909 MFSD5Q6N075 450 aa15.21■□□□□ 0.03
CAPN1-227ENST00000533909 KRT25Q7Z3Z0 450 aa15.21■□□□□ 0.03
CAPN1-227ENST00000533909 CCDC83Q8IWF9 413 aa15.21■□□□□ 0.03
CAPN1-227ENST00000533909 RETREG2Q8NC44 543 aa15.21■□□□□ 0.03
CAPN1-227ENST00000533909 DAGLBQ8NCG7 672 aa15.21■□□□□ 0.03
CAPN1-227ENST00000533909 IL27Q8NEV9 243 aa15.21■□□□□ 0.03
CAPN1-227ENST00000533909 SEPT1Q8WYJ6 367 aa15.21■□□□□ 0.03
CAPN1-227ENST00000533909 GLG1Q92896 1179 aa15.21■□□□□ 0.03
CAPN1-227ENST00000533909 ZNF577Q9BSK1 485 aa15.21■□□□□ 0.03
CAPN1-227ENST00000533909 AZI2Q9H6S1 392 aa15.21■□□□□ 0.03
CAPN1-227ENST00000533909 AGO4Q9HCK5 861 aaKnown RBP15.21■□□□□ 0.03
CAPN1-227ENST00000533909 SH2B1Q9NRF2 756 aaPredicted RBP15.21■□□□□ 0.03
CAPN1-227ENST00000533909 SLC9A2Q9UBY0 812 aa15.21■□□□□ 0.03
CAPN1-227ENST00000533909 SCN10AQ9Y5Y9 1956 aa15.21■□□□□ 0.03
CAPN1-227ENST00000533909 RANBP2P49792 3224 aaKnown RBP15.21■□□□□ 0.03
CAPN1-227ENST00000533909 FAM86B1E9PN63 330 aa15.2■□□□□ 0.02
CAPN1-227ENST00000533909 DTNBO60941 627 aa15.2■□□□□ 0.02
CAPN1-227ENST00000533909 FAM86B2P0C5J1 330 aa15.2■□□□□ 0.02
CAPN1-227ENST00000533909 ITGB8P26012 769 aa15.2■□□□□ 0.02
CAPN1-227ENST00000533909 CYP2C18P33260 490 aa15.2■□□□□ 0.02
CAPN1-227ENST00000533909 USP11P51784 963 aa15.2■□□□□ 0.02
CAPN1-227ENST00000533909 BFSP2Q13515 415 aa15.2■□□□□ 0.02
CAPN1-227ENST00000533909 NONOQ15233 471 aaKnown RBP eCLIP15.2■□□□□ 0.02
CAPN1-227ENST00000533909 NSUN7Q8NE18 718 aaKnown RBP15.2■□□□□ 0.02
CAPN1-227ENST00000533909 TBCKQ8TEA7 893 aa15.2■□□□□ 0.02
CAPN1-227ENST00000533909 KIF2CQ99661 725 aa15.2■□□□□ 0.02
CAPN1-227ENST00000533909 NOC4LQ9BVI4 516 aaKnown RBP15.2■□□□□ 0.02
CAPN1-227ENST00000533909 PRO3102Q9H379 93 aa15.2■□□□□ 0.02
CAPN1-227ENST00000533909 HDAC6Q9UBN7 1215 aa15.2■□□□□ 0.02
CAPN1-227ENST00000533909 NFASCO94856 1347 aa15.19■□□□□ 0.02
CAPN1-227ENST00000533909 C17orf102A2RUQ5 167 aa15.19■□□□□ 0.02
CAPN1-227ENST00000533909 DDX39AO00148 427 aaKnown RBP15.19■□□□□ 0.02
CAPN1-227ENST00000533909 IPO5O00410 1097 aaKnown RBP15.19■□□□□ 0.02
CAPN1-227ENST00000533909 ADAMTS3O15072 1205 aa15.19■□□□□ 0.02
CAPN1-227ENST00000533909 JAK2O60674 1132 aa15.19■□□□□ 0.02
CAPN1-227ENST00000533909 GNAT1P11488 350 aa15.19■□□□□ 0.02
CAPN1-227ENST00000533909 FOSBP53539 338 aa15.19■□□□□ 0.02
CAPN1-227ENST00000533909 CCL23P55773 120 aa15.19■□□□□ 0.02
CAPN1-227ENST00000533909 SESTD1Q86VW0 696 aa15.19■□□□□ 0.02
CAPN1-227ENST00000533909 TRIM50Q86XT4 487 aa15.19■□□□□ 0.02
CAPN1-227ENST00000533909 FAM184AQ8NB25 1140 aa15.19■□□□□ 0.02
CAPN1-227ENST00000533909 LLPHQ9BRT6 129 aaKnown RBP15.19■□□□□ 0.02
CAPN1-227ENST00000533909 C16orf70Q9BSU1 422 aa15.19■□□□□ 0.02
CAPN1-227ENST00000533909 PHF20Q9BVI0 1012 aa15.19■□□□□ 0.02
CAPN1-227ENST00000533909 TBC1D22BQ9NU19 505 aa15.19■□□□□ 0.02
CAPN1-227ENST00000533909 GTF2IRD1Q9UHL9 959 aa15.19■□□□□ 0.02
CAPN1-227ENST00000533909 LTBP2Q14767 1821 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms