RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 SPTLC2O15270 562 aa13.46□□□□□ -0.25
COMMD9-208ENST00000533643 SEPT4O43236 478 aa13.46□□□□□ -0.25
COMMD9-208ENST00000533643 SORBS3O60504 671 aa13.46□□□□□ -0.25
COMMD9-208ENST00000533643 GAS7O60861 476 aa13.46□□□□□ -0.25
COMMD9-208ENST00000533643 GGPS1O95749 300 aa13.46□□□□□ -0.25
COMMD9-208ENST00000533643 MARCKSP29966 332 aaPredicted RBP13.46□□□□□ -0.25
COMMD9-208ENST00000533643 CNGA1P29973 690 aa13.46□□□□□ -0.25
COMMD9-208ENST00000533643 PRPHP41219 470 aa13.46□□□□□ -0.25
COMMD9-208ENST00000533643 NEDD9Q14511 834 aa13.46□□□□□ -0.25
COMMD9-208ENST00000533643 SLC9C1Q4G0N8 1177 aa13.46□□□□□ -0.25
COMMD9-208ENST00000533643 CELF3Q5SZQ8 465 aaKnown RBP13.46□□□□□ -0.25
COMMD9-208ENST00000533643 GJC2Q5T442 439 aaPredicted RBP13.46□□□□□ -0.25
COMMD9-208ENST00000533643 LRCH2Q5VUJ6 765 aa13.46□□□□□ -0.25
COMMD9-208ENST00000533643 ARL6IP4Q66PJ3 421 aaKnown RBP13.46□□□□□ -0.25
COMMD9-208ENST00000533643 CLEC17AQ6ZS10 378 aa13.46□□□□□ -0.25
COMMD9-208ENST00000533643 CYFIP1Q7L576 1253 aa13.46□□□□□ -0.25
COMMD9-208ENST00000533643 SCAND2PQ9GZW5 306 aaPredicted RBP13.46□□□□□ -0.25
COMMD9-208ENST00000533643 GDPD2Q9HCC8 539 aa13.46□□□□□ -0.25
COMMD9-208ENST00000533643 TBC1D22BQ9NU19 505 aa13.46□□□□□ -0.25
COMMD9-208ENST00000533643 FBXO2Q9UK22 296 aaPredicted RBP13.46□□□□□ -0.25
COMMD9-208ENST00000533643 VAV3Q9UKW4 847 aa13.46□□□□□ -0.25
COMMD9-208ENST00000533643 TELO2Q9Y4R8 837 aa13.46□□□□□ -0.25
COMMD9-208ENST00000533643 KIAA1217Q5T5P2 1943 aa13.45□□□□□ -0.26
COMMD9-208ENST00000533643 MYH15Q9Y2K3 1946 aa13.45□□□□□ -0.26
COMMD9-208ENST00000533643 POTEFA5A3E0 1075 aa13.45□□□□□ -0.26
COMMD9-208ENST00000533643 NKRFO15226 690 aaKnown RBP eCLIP13.45□□□□□ -0.26
COMMD9-208ENST00000533643 PPP6R2O75170 966 aa13.45□□□□□ -0.26
COMMD9-208ENST00000533643 CCNE2O96020 404 aa13.45□□□□□ -0.26
COMMD9-208ENST00000533643 AKR1A1P14550 325 aa13.45□□□□□ -0.26
COMMD9-208ENST00000533643 ARHGAP1Q07960 439 aa13.45□□□□□ -0.26
COMMD9-208ENST00000533643 B3GNT9Q6UX72 402 aa13.45□□□□□ -0.26
COMMD9-208ENST00000533643 DTHD1Q6ZMT9 781 aa13.45□□□□□ -0.26
COMMD9-208ENST00000533643 DHX37Q8IY37 1157 aaKnown RBP13.45□□□□□ -0.26
COMMD9-208ENST00000533643 GIMAP8Q8ND71 665 aaPredicted RBP13.45□□□□□ -0.26
COMMD9-208ENST00000533643 KCNG4Q8TDN1 519 aa13.45□□□□□ -0.26
COMMD9-208ENST00000533643 LENG1Q96BZ8 264 aaPredicted RBP13.45□□□□□ -0.26
COMMD9-208ENST00000533643 SPATA32Q96LK8 384 aa13.45□□□□□ -0.26
COMMD9-208ENST00000533643 SDF4Q9BRK5 362 aa13.45□□□□□ -0.26
COMMD9-208ENST00000533643 TTC12Q9H892 705 aaPredicted RBP13.45□□□□□ -0.26
COMMD9-208ENST00000533643 PCDHA12Q9UN75 941 aa13.45□□□□□ -0.26
COMMD9-208ENST00000533643 GNEQ9Y223 722 aaKnown RBP13.45□□□□□ -0.26
COMMD9-208ENST00000533643 SRPRBQ9Y5M8 271 aaKnown RBP13.45□□□□□ -0.26
COMMD9-208ENST00000533643 VWA3AA6NCI4 1184 aa13.44□□□□□ -0.26
COMMD9-208ENST00000533643 DDX39AO00148 427 aaKnown RBP13.44□□□□□ -0.26
COMMD9-208ENST00000533643 FARP2O94887 1054 aaPredicted RBP13.44□□□□□ -0.26
COMMD9-208ENST00000533643 GH1P01241 217 aa13.44□□□□□ -0.26
COMMD9-208ENST00000533643 TECP42680 631 aa13.44□□□□□ -0.26
COMMD9-208ENST00000533643 FXR2P51116 673 aaKnown RBP eCLIP13.44□□□□□ -0.26
COMMD9-208ENST00000533643 GRIN1Q05586 938 aa13.44□□□□□ -0.26
COMMD9-208ENST00000533643 SPIRE1Q08AE8 756 aa13.44□□□□□ -0.26
COMMD9-208ENST00000533643 PPP2R5CQ13362 524 aa13.44□□□□□ -0.26
COMMD9-208ENST00000533643 LAMC2Q13753 1193 aa13.44□□□□□ -0.26
COMMD9-208ENST00000533643 METTL7BQ6UX53 244 aa13.44□□□□□ -0.26
COMMD9-208ENST00000533643 KRI1Q8N9T8 703 aaKnown RBP13.44□□□□□ -0.26
COMMD9-208ENST00000533643 EMID1Q96A84 441 aaPredicted RBP13.44□□□□□ -0.26
COMMD9-208ENST00000533643 FERMT2Q96AC1 680 aa13.44□□□□□ -0.26
COMMD9-208ENST00000533643 CLIC6Q96NY7 704 aa13.44□□□□□ -0.26
COMMD9-208ENST00000533643 TEKT3Q9BXF9 490 aa13.44□□□□□ -0.26
COMMD9-208ENST00000533643 UNC93B1Q9H1C4 597 aa13.44□□□□□ -0.26
COMMD9-208ENST00000533643 UNC45AQ9H3U1 944 aa13.44□□□□□ -0.26
COMMD9-208ENST00000533643 MLXIPQ9HAP2 919 aa13.44□□□□□ -0.26
COMMD9-208ENST00000533643 JPH1Q9HDC5 661 aaPredicted RBP13.44□□□□□ -0.26
COMMD9-208ENST00000533643 HMX1Q9NP08 348 aaPredicted RBP13.44□□□□□ -0.26
COMMD9-208ENST00000533643 SLC9A2Q9UBY0 812 aa13.44□□□□□ -0.26
COMMD9-208ENST00000533643 EML1O00423 815 aa13.43□□□□□ -0.26
COMMD9-208ENST00000533643 DYNC1LI2O43237 492 aaPredicted RBP13.43□□□□□ -0.26
COMMD9-208ENST00000533643 CHMP2AO43633 222 aa13.43□□□□□ -0.26
COMMD9-208ENST00000533643 DUSP11O75319 330 aaKnown RBP13.43□□□□□ -0.26
COMMD9-208ENST00000533643 KRT76Q01546 638 aa13.43□□□□□ -0.26
COMMD9-208ENST00000533643 PDIA5Q14554 519 aa13.43□□□□□ -0.26
COMMD9-208ENST00000533643 MTFR1Q15390 333 aa13.43□□□□□ -0.26
COMMD9-208ENST00000533643 TMEM266Q2M3C6 531 aa13.43□□□□□ -0.26
COMMD9-208ENST00000533643 AXDND1Q5T1B0 1012 aaPredicted RBP13.43□□□□□ -0.26
COMMD9-208ENST00000533643 ZNF746Q6NUN9 644 aaPredicted RBP13.43□□□□□ -0.26
COMMD9-208ENST00000533643 IGSF22Q8N9C0 903 aa13.43□□□□□ -0.26
COMMD9-208ENST00000533643 OR6J1Q8NGC5 347 aa13.43□□□□□ -0.26
COMMD9-208ENST00000533643 ARMC5Q96C12 935 aa13.43□□□□□ -0.26
COMMD9-208ENST00000533643 DDX20Q9UHI6 824 aaKnown RBP13.43□□□□□ -0.26
COMMD9-208ENST00000533643 PCDHA7Q9UN72 937 aa13.43□□□□□ -0.26
COMMD9-208ENST00000533643 Q9Y3F1 56 aa13.43□□□□□ -0.26
COMMD9-208ENST00000533643 GSTTP1A0A1W2PQM5 241 aa13.42□□□□□ -0.26
COMMD9-208ENST00000533643 POTEMA6NI47 508 aa13.42□□□□□ -0.26
COMMD9-208ENST00000533643 CUTAO60888 179 aa13.42□□□□□ -0.26
COMMD9-208ENST00000533643 RARBP10826 455 aa13.42□□□□□ -0.26
COMMD9-208ENST00000533643 CCL5P13501 91 aa13.42□□□□□ -0.26
COMMD9-208ENST00000533643 ME1P48163 572 aa13.42□□□□□ -0.26
COMMD9-208ENST00000533643 ACTR2P61160 394 aa13.42□□□□□ -0.26
COMMD9-208ENST00000533643 IRX5P78411 483 aaPredicted RBP13.42□□□□□ -0.26
COMMD9-208ENST00000533643 SP4Q02446 784 aa13.42□□□□□ -0.26
COMMD9-208ENST00000533643 HSDL1Q3SXM5 330 aa13.42□□□□□ -0.26
COMMD9-208ENST00000533643 LHX8Q68G74 356 aa13.42□□□□□ -0.26
COMMD9-208ENST00000533643 NCAPH2Q6IBW4 605 aa13.42□□□□□ -0.26
COMMD9-208ENST00000533643 TLK2Q86UE8 772 aa13.42□□□□□ -0.26
COMMD9-208ENST00000533643 AFG1LQ8WV93 481 aa13.42□□□□□ -0.26
COMMD9-208ENST00000533643 ZNF333Q96JL9 665 aa13.42□□□□□ -0.26
COMMD9-208ENST00000533643 SPATA33Q96N06 139 aa13.42□□□□□ -0.26
COMMD9-208ENST00000533643 GPR20Q99678 358 aa13.42□□□□□ -0.26
COMMD9-208ENST00000533643 MCOLN1Q9GZU1 580 aa13.42□□□□□ -0.26
COMMD9-208ENST00000533643 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.42□□□□□ -0.26
COMMD9-208ENST00000533643 AP5M1Q9H0R1 490 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms