RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 CHMP2AO43633 222 aa19.74■□□□□ 0.75
NXF1-216ENST00000533499 KCNA2P16389 499 aa19.74■□□□□ 0.75
NXF1-216ENST00000533499 NCLP19338 710 aaKnown RBP19.74■□□□□ 0.75
NXF1-216ENST00000533499 TXKP42681 527 aa19.74■□□□□ 0.75
NXF1-216ENST00000533499 IRX5P78411 483 aaPredicted RBP19.74■□□□□ 0.75
NXF1-216ENST00000533499 BEX3Q00994 111 aa19.74■□□□□ 0.75
NXF1-216ENST00000533499 ITGB3BPQ13352 177 aaPredicted RBP19.74■□□□□ 0.75
NXF1-216ENST00000533499 LAMC2Q13753 1193 aa19.74■□□□□ 0.75
NXF1-216ENST00000533499 CELF3Q5SZQ8 465 aaKnown RBP19.74■□□□□ 0.75
NXF1-216ENST00000533499 U2AF1L4Q8WU68 220 aaKnown RBP19.74■□□□□ 0.75
NXF1-216ENST00000533499 AFG1LQ8WV93 481 aa19.74■□□□□ 0.75
NXF1-216ENST00000533499 ABHD8Q96I13 439 aa19.74■□□□□ 0.75
NXF1-216ENST00000533499 TEKT3Q9BXF9 490 aa19.74■□□□□ 0.75
NXF1-216ENST00000533499 JPH1Q9HDC5 661 aaPredicted RBP19.74■□□□□ 0.75
NXF1-216ENST00000533499 TFIP11Q9UBB9 837 aaKnown RBP19.74■□□□□ 0.75
NXF1-216ENST00000533499 GNEQ9Y223 722 aaKnown RBP19.74■□□□□ 0.75
NXF1-216ENST00000533499 SYNRGQ9UMZ2 1314 aa19.74■□□□□ 0.75
NXF1-216ENST00000533499 CCDC85CA6NKD9 419 aa19.73■□□□□ 0.75
NXF1-216ENST00000533499 GJB1P08034 283 aa19.73■□□□□ 0.75
NXF1-216ENST00000533499 CHMP4BP1P59074 171 aa19.73■□□□□ 0.75
NXF1-216ENST00000533499 ARHGAP1Q07960 439 aa19.73■□□□□ 0.75
NXF1-216ENST00000533499 PTGDRQ13258 359 aa19.73■□□□□ 0.75
NXF1-216ENST00000533499 BRDTQ58F21 947 aaPredicted RBP19.73■□□□□ 0.75
NXF1-216ENST00000533499 GNASQ5JWF2 1037 aa19.73■□□□□ 0.75
NXF1-216ENST00000533499 SENP7Q9BQF6 1050 aa19.73■□□□□ 0.75
NXF1-216ENST00000533499 FTOQ9C0B1 505 aaKnown RBP eCLIP19.73■□□□□ 0.75
NXF1-216ENST00000533499 TMEM60Q9H2L4 133 aa19.73■□□□□ 0.75
NXF1-216ENST00000533499 TBC1D22BQ9NU19 505 aa19.73■□□□□ 0.75
NXF1-216ENST00000533499 SLC9A2Q9UBY0 812 aa19.73■□□□□ 0.75
NXF1-216ENST00000533499 SAMM50Q9Y512 469 aa19.73■□□□□ 0.75
NXF1-216ENST00000533499 MYADML2A6NDP7 307 aa19.72■□□□□ 0.75
NXF1-216ENST00000533499 FARP2O94887 1054 aaPredicted RBP19.72■□□□□ 0.75
NXF1-216ENST00000533499 MYL3P08590 195 aa19.72■□□□□ 0.75
NXF1-216ENST00000533499 OR52Z1P0C646 297 aa19.72■□□□□ 0.75
NXF1-216ENST00000533499 SF3A1Q15459 793 aaKnown RBP19.72■□□□□ 0.75
NXF1-216ENST00000533499 FSCN1Q16658 493 aaKnown RBP19.72■□□□□ 0.75
NXF1-216ENST00000533499 LHX8Q68G74 356 aa19.72■□□□□ 0.75
NXF1-216ENST00000533499 METTL7BQ6UX53 244 aa19.72■□□□□ 0.75
NXF1-216ENST00000533499 RNF180Q86T96 592 aa19.72■□□□□ 0.75
NXF1-216ENST00000533499 SLFN12Q8IYM2 578 aa19.72■□□□□ 0.75
NXF1-216ENST00000533499 ARRDC4Q8NCT1 418 aa19.72■□□□□ 0.75
NXF1-216ENST00000533499 SLC5A5Q92911 643 aa19.72■□□□□ 0.75
NXF1-216ENST00000533499 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.72■□□□□ 0.75
NXF1-216ENST00000533499 CEP131Q9UPN4 1083 aa19.72■□□□□ 0.75
NXF1-216ENST00000533499 CLIC4Q9Y696 253 aa19.72■□□□□ 0.75
NXF1-216ENST00000533499 KIAA0100Q14667 2235 aaKnown RBP19.72■□□□□ 0.75
NXF1-216ENST00000533499 SGPL1O95470 568 aa19.71■□□□□ 0.75
NXF1-216ENST00000533499 CPT1AP50416 773 aa19.71■□□□□ 0.75
NXF1-216ENST00000533499 GJA9P57773 515 aa19.71■□□□□ 0.75
NXF1-216ENST00000533499 ORC2Q13416 577 aaPredicted RBP19.71■□□□□ 0.75
NXF1-216ENST00000533499 UTP14CQ5TAP6 766 aaKnown RBP19.71■□□□□ 0.75
NXF1-216ENST00000533499 ETNPPLQ8TBG4 499 aa19.71■□□□□ 0.75
NXF1-216ENST00000533499 FAM20AQ96MK3 541 aa19.71■□□□□ 0.75
NXF1-216ENST00000533499 USP28Q96RU2 1077 aa19.71■□□□□ 0.75
NXF1-216ENST00000533499 KCNMB3Q9NPA1 279 aa19.71■□□□□ 0.75
NXF1-216ENST00000533499 CHMP5Q9NZZ3 219 aa19.71■□□□□ 0.75
NXF1-216ENST00000533499 CIZ1Q9ULV3 898 aaPredicted RBP19.71■□□□□ 0.75
NXF1-216ENST00000533499 Q9Y3F1 56 aa19.71■□□□□ 0.75
NXF1-216ENST00000533499 TELO2Q9Y4R8 837 aa19.71■□□□□ 0.75
NXF1-216ENST00000533499 ATP6V1DQ9Y5K8 247 aa19.71■□□□□ 0.75
NXF1-216ENST00000533499 NFASCO94856 1347 aa19.71■□□□□ 0.75
NXF1-216ENST00000533499 HTTP42858 3142 aa19.71■□□□□ 0.75
NXF1-216ENST00000533499 KBTBD13C9JR72 458 aa19.7■□□□□ 0.74
NXF1-216ENST00000533499 TBX3O15119 743 aa19.7■□□□□ 0.74
NXF1-216ENST00000533499 DDIT3P35638 169 aa19.7■□□□□ 0.74
NXF1-216ENST00000533499 DNM1Q05193 864 aaKnown RBP19.7■□□□□ 0.74
NXF1-216ENST00000533499 STK38Q15208 465 aa19.7■□□□□ 0.74
NXF1-216ENST00000533499 HSDL1Q3SXM5 330 aa19.7■□□□□ 0.74
NXF1-216ENST00000533499 NCAPH2Q6IBW4 605 aa19.7■□□□□ 0.74
NXF1-216ENST00000533499 HAS1Q92839 578 aa19.7■□□□□ 0.74
NXF1-216ENST00000533499 VTI1AQ96AJ9 217 aa19.7■□□□□ 0.74
NXF1-216ENST00000533499 CHAMP1Q96JM3 812 aa19.7■□□□□ 0.74
NXF1-216ENST00000533499 RIT2Q99578 217 aa19.7■□□□□ 0.74
NXF1-216ENST00000533499 MYH15Q9Y2K3 1946 aa19.7■□□□□ 0.74
NXF1-216ENST00000533499 FRMPD3Q5JV73 1810 aa19.69■□□□□ 0.74
NXF1-216ENST00000533499 DHX15O43143 795 aaKnown RBP19.69■□□□□ 0.74
NXF1-216ENST00000533499 ZEB2O60315 1214 aa19.69■□□□□ 0.74
NXF1-216ENST00000533499 ADAMTS4O75173 837 aa19.69■□□□□ 0.74
NXF1-216ENST00000533499 SOX10P56693 466 aa19.69■□□□□ 0.74
NXF1-216ENST00000533499 ACTR2P61160 394 aa19.69■□□□□ 0.74
NXF1-216ENST00000533499 KRT76Q01546 638 aa19.69■□□□□ 0.74
NXF1-216ENST00000533499 LRRC41Q15345 812 aa19.69■□□□□ 0.74
NXF1-216ENST00000533499 TMEM266Q2M3C6 531 aa19.69■□□□□ 0.74
NXF1-216ENST00000533499 MIER3Q7Z3K6 550 aa19.69■□□□□ 0.74
NXF1-216ENST00000533499 UPF3AQ9H1J1 476 aaKnown RBP19.69■□□□□ 0.74
NXF1-216ENST00000533499 UNC45AQ9H3U1 944 aa19.69■□□□□ 0.74
NXF1-216ENST00000533499 TTC12Q9H892 705 aaPredicted RBP19.69■□□□□ 0.74
NXF1-216ENST00000533499 PCDHA12Q9UN75 941 aa19.69■□□□□ 0.74
NXF1-216ENST00000533499 POTEFA5A3E0 1075 aa19.68■□□□□ 0.74
NXF1-216ENST00000533499 BACH1O14867 736 aa19.68■□□□□ 0.74
NXF1-216ENST00000533499 PSMD10O75832 226 aa19.68■□□□□ 0.74
NXF1-216ENST00000533499 BMP15O95972 392 aa19.68■□□□□ 0.74
NXF1-216ENST00000533499 CCNE2O96020 404 aa19.68■□□□□ 0.74
NXF1-216ENST00000533499 MMP3P08254 477 aa19.68■□□□□ 0.74
NXF1-216ENST00000533499 MARCKSP29966 332 aaPredicted RBP19.68■□□□□ 0.74
NXF1-216ENST00000533499 TCF7P36402 384 aaPredicted RBP19.68■□□□□ 0.74
NXF1-216ENST00000533499 TECP42680 631 aa19.68■□□□□ 0.74
NXF1-216ENST00000533499 GJA8P48165 433 aa19.68■□□□□ 0.74
NXF1-216ENST00000533499 KCNA10Q16322 511 aa19.68■□□□□ 0.74
NXF1-216ENST00000533499 PPTC7Q8NI37 304 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms