RNA–Protein interactions for RNA: ENST00000533162.1

PUF60-221, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-221ENST00000533162 GTF3C6Q969F1 213 aa16.96■□□□□ 0.31
PUF60-221ENST00000533162 PGBD1Q96JS3 809 aa16.96■□□□□ 0.31
PUF60-221ENST00000533162 PRO3102Q9H379 93 aa16.96■□□□□ 0.31
PUF60-221ENST00000533162 HIPK3Q9H422 1215 aa16.96■□□□□ 0.31
PUF60-221ENST00000533162 BRMS1Q9HCU9 246 aa16.96■□□□□ 0.31
PUF60-221ENST00000533162 ORC3Q9UBD5 711 aaPredicted RBP16.96■□□□□ 0.31
PUF60-221ENST00000533162 TBX21Q9UL17 535 aa16.96■□□□□ 0.31
PUF60-221ENST00000533162 GRIN2DO15399 1336 aa16.96■□□□□ 0.3
PUF60-221ENST00000533162 H3BRB1 525 aa16.95■□□□□ 0.3
PUF60-221ENST00000533162 F2P00734 622 aa16.95■□□□□ 0.3
PUF60-221ENST00000533162 GNAT1P11488 350 aa16.95■□□□□ 0.3
PUF60-221ENST00000533162 USP11P51784 963 aa16.95■□□□□ 0.3
PUF60-221ENST00000533162 SEMA3FQ13275 785 aa16.95■□□□□ 0.3
PUF60-221ENST00000533162 BFSP2Q13515 415 aa16.95■□□□□ 0.3
PUF60-221ENST00000533162 TRIM29Q14134 588 aa16.95■□□□□ 0.3
PUF60-221ENST00000533162 RABEP1Q15276 862 aa16.95■□□□□ 0.3
PUF60-221ENST00000533162 ME3Q16798 604 aa16.95■□□□□ 0.3
PUF60-221ENST00000533162 KIAA0753Q2KHM9 967 aa16.95■□□□□ 0.3
PUF60-221ENST00000533162 MFSD5Q6N075 450 aa16.95■□□□□ 0.3
PUF60-221ENST00000533162 BLIDQ8IZY5 108 aa16.95■□□□□ 0.3
PUF60-221ENST00000533162 RETREG2Q8NC44 543 aa16.95■□□□□ 0.3
PUF60-221ENST00000533162 SEPT1Q8WYJ6 367 aa16.95■□□□□ 0.3
PUF60-221ENST00000533162 GPR20Q99678 358 aa16.95■□□□□ 0.3
PUF60-221ENST00000533162 ALG1Q9BT22 464 aa16.95■□□□□ 0.3
PUF60-221ENST00000533162 TRPV6Q9H1D0 765 aa16.95■□□□□ 0.3
PUF60-221ENST00000533162 TUT1Q9H6E5 874 aaKnown RBP16.95■□□□□ 0.3
PUF60-221ENST00000533162 SH2B1Q9NRF2 756 aaPredicted RBP16.95■□□□□ 0.3
PUF60-221ENST00000533162 KCNH7Q9NS40 1196 aa16.95■□□□□ 0.3
PUF60-221ENST00000533162 MEIS1O00470 390 aa16.94■□□□□ 0.3
PUF60-221ENST00000533162 ZNF286BP0CG31 522 aa16.94■□□□□ 0.3
PUF60-221ENST00000533162 KCNA2P16389 499 aa16.94■□□□□ 0.3
PUF60-221ENST00000533162 SP4Q02446 784 aa16.94■□□□□ 0.3
PUF60-221ENST00000533162 PTGISQ16647 500 aa16.94■□□□□ 0.3
PUF60-221ENST00000533162 PLA2G4DQ86XP0 818 aa16.94■□□□□ 0.3
PUF60-221ENST00000533162 DAGLBQ8NCG7 672 aa16.94■□□□□ 0.3
PUF60-221ENST00000533162 AZI2Q9H6S1 392 aa16.94■□□□□ 0.3
PUF60-221ENST00000533162 JPH1Q9HDC5 661 aaPredicted RBP16.94■□□□□ 0.3
PUF60-221ENST00000533162 DNAH12Q6ZR08 3092 aa16.94■□□□□ 0.3
PUF60-221ENST00000533162 NFASCO94856 1347 aa16.94■□□□□ 0.3
PUF60-221ENST00000533162 LGALS2P05162 132 aa16.93■□□□□ 0.3
PUF60-221ENST00000533162 RPUSD2Q8IZ73 545 aaKnown RBP16.93■□□□□ 0.3
PUF60-221ENST00000533162 NECAB1Q8N987 351 aa16.93■□□□□ 0.3
PUF60-221ENST00000533162 KAT2BQ92831 832 aa16.93■□□□□ 0.3
PUF60-221ENST00000533162 PPP1R12CQ9BZL4 782 aa16.93■□□□□ 0.3
PUF60-221ENST00000533162 AGO4Q9HCK5 861 aaKnown RBP16.93■□□□□ 0.3
PUF60-221ENST00000533162 TBC1D22BQ9NU19 505 aa16.93■□□□□ 0.3
PUF60-221ENST00000533162 TRMT13Q9NUP7 481 aaKnown RBP16.93■□□□□ 0.3
PUF60-221ENST00000533162 PKD2L1Q9P0L9 805 aa16.93■□□□□ 0.3
PUF60-221ENST00000533162 SLC9A2Q9UBY0 812 aa16.93■□□□□ 0.3
PUF60-221ENST00000533162 ALPK3Q96L96 1907 aa16.93■□□□□ 0.3
PUF60-221ENST00000533162 KIAA1217Q5T5P2 1943 aa16.92■□□□□ 0.3
PUF60-221ENST00000533162 CCDC194A0A1B0GVG4 234 aa16.92■□□□□ 0.3
PUF60-221ENST00000533162 HAS3O00219 553 aa16.92■□□□□ 0.3
PUF60-221ENST00000533162 ATP9AO75110 1047 aa16.92■□□□□ 0.3
PUF60-221ENST00000533162 TCF7P36402 384 aaPredicted RBP16.92■□□□□ 0.3
PUF60-221ENST00000533162 NONOQ15233 471 aaKnown RBP eCLIP16.92■□□□□ 0.35e-8■■■■■ 37.9
PUF60-221ENST00000533162 UTP14CQ5TAP6 766 aaKnown RBP16.92■□□□□ 0.3
PUF60-221ENST00000533162 KRT25Q7Z3Z0 450 aa16.92■□□□□ 0.3
PUF60-221ENST00000533162 CAGE1Q8TC20 777 aa16.92■□□□□ 0.3
PUF60-221ENST00000533162 GLG1Q92896 1179 aa16.92■□□□□ 0.3
PUF60-221ENST00000533162 NAP1L4Q99733 375 aaKnown RBP16.92■□□□□ 0.3
PUF60-221ENST00000533162 LLPHQ9BRT6 129 aaKnown RBP16.92■□□□□ 0.3
PUF60-221ENST00000533162 ZNF577Q9BSK1 485 aa16.92■□□□□ 0.3
PUF60-221ENST00000533162 C16orf70Q9BSU1 422 aa16.92■□□□□ 0.3
PUF60-221ENST00000533162 MTIF3Q9H2K0 278 aaKnown RBP16.92■□□□□ 0.3
PUF60-221ENST00000533162 SMARCAD1Q9H4L7 1026 aa16.92■□□□□ 0.3
PUF60-221ENST00000533162 HDAC6Q9UBN7 1215 aa16.92■□□□□ 0.3
PUF60-221ENST00000533162 GTF2IRD1Q9UHL9 959 aa16.92■□□□□ 0.3
PUF60-221ENST00000533162 C17orf102A2RUQ5 167 aa16.91■□□□□ 0.3
PUF60-221ENST00000533162 PITPNM1O00562 1244 aa16.91■□□□□ 0.3
PUF60-221ENST00000533162 PARNO95453 639 aaKnown RBP16.91■□□□□ 0.3
PUF60-221ENST00000533162 ARP10275 920 aa16.91■□□□□ 0.3
PUF60-221ENST00000533162 CIITAP33076 1130 aa16.91■□□□□ 0.3
PUF60-221ENST00000533162 CYP2C18P33260 490 aa16.91■□□□□ 0.3
PUF60-221ENST00000533162 PSRC1Q6PGN9 363 aaPredicted RBP16.91■□□□□ 0.3
PUF60-221ENST00000533162 CYP2W1Q8TAV3 490 aa16.91■□□□□ 0.3
PUF60-221ENST00000533162 RASGRP4Q8TDF6 673 aa16.91■□□□□ 0.3
PUF60-221ENST00000533162 PHF20Q9BVI0 1012 aa16.91■□□□□ 0.3
PUF60-221ENST00000533162 NOC4LQ9BVI4 516 aaKnown RBP16.91■□□□□ 0.3
PUF60-221ENST00000533162 ERAP1Q9NZ08 941 aa16.91■□□□□ 0.3
PUF60-221ENST00000533162 GTF3C3Q9Y5Q9 886 aa16.91■□□□□ 0.3
PUF60-221ENST00000533162 FAM86B1E9PN63 330 aa16.9■□□□□ 0.3
PUF60-221ENST00000533162 IPO5O00410 1097 aaKnown RBP16.9■□□□□ 0.3
PUF60-221ENST00000533162 PFKMP08237 780 aa16.9■□□□□ 0.3
PUF60-221ENST00000533162 FAM86B2P0C5J1 330 aa16.9■□□□□ 0.3
PUF60-221ENST00000533162 RFC2P35250 354 aa16.9■□□□□ 0.3
PUF60-221ENST00000533162 MCM2P49736 904 aa16.9■□□□□ 0.3
PUF60-221ENST00000533162 HMGN5P82970 282 aaKnown RBP16.9■□□□□ 0.3
PUF60-221ENST00000533162 PTK7Q13308 1070 aa16.9■□□□□ 0.3
PUF60-221ENST00000533162 SAFBQ15424 915 aaKnown RBP eCLIP16.9■□□□□ 0.3
PUF60-221ENST00000533162 LRIT3Q3SXY7 679 aa16.9■□□□□ 0.3
PUF60-221ENST00000533162 PRR16Q569H4 304 aa16.9■□□□□ 0.3
PUF60-221ENST00000533162 GDF6Q6KF10 455 aaPredicted RBP16.9■□□□□ 0.3
PUF60-221ENST00000533162 NSUN7Q8NE18 718 aaKnown RBP16.9■□□□□ 0.3
PUF60-221ENST00000533162 TBCKQ8TEA7 893 aa16.9■□□□□ 0.3
PUF60-221ENST00000533162 CRYGNQ8WXF5 182 aa16.9■□□□□ 0.3
PUF60-221ENST00000533162 CTDNEP1O95476 244 aa16.89■□□□□ 0.29
PUF60-221ENST00000533162 CYP2C9P11712 490 aa16.89■□□□□ 0.29
PUF60-221ENST00000533162 CSF2RAP15509 400 aa16.89■□□□□ 0.29
PUF60-221ENST00000533162 ITGB8P26012 769 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms