RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 LGR5O75473 907 aa19.73■□□□□ 0.75
RPUSD4-207ENST00000532800 SMIM10L2AP0DMW4 78 aa19.73■□□□□ 0.75
RPUSD4-207ENST00000532800 SMIM10L2BP0DMW5 78 aa19.73■□□□□ 0.75
RPUSD4-207ENST00000532800 BMP1P13497 986 aa19.73■□□□□ 0.75
RPUSD4-207ENST00000532800 HOXC8P31273 242 aa19.73■□□□□ 0.75
RPUSD4-207ENST00000532800 ICAM3P32942 547 aa19.73■□□□□ 0.75
RPUSD4-207ENST00000532800 THPOP40225 353 aa19.73■□□□□ 0.75
RPUSD4-207ENST00000532800 IKBKEQ14164 716 aa19.73■□□□□ 0.75
RPUSD4-207ENST00000532800 GNPTABQ3T906 1256 aa19.73■□□□□ 0.75
RPUSD4-207ENST00000532800 FAM117BQ6P1L5 589 aa19.73■□□□□ 0.75
RPUSD4-207ENST00000532800 USP17L6PQ6QN14 398 aa19.73■□□□□ 0.75
RPUSD4-207ENST00000532800 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.73■□□□□ 0.75
RPUSD4-207ENST00000532800 CYFIP1Q7L576 1253 aa19.73■□□□□ 0.75
RPUSD4-207ENST00000532800 ATP6V0A1Q93050 837 aa19.73■□□□□ 0.75
RPUSD4-207ENST00000532800 SPZ1Q9BXG8 430 aa19.73■□□□□ 0.75
RPUSD4-207ENST00000532800 TUT1Q9H6E5 874 aaKnown RBP19.73■□□□□ 0.75
RPUSD4-207ENST00000532800 MTUS1Q9ULD2 1270 aa19.73■□□□□ 0.75
RPUSD4-207ENST00000532800 SIP14410 1827 aa19.73■□□□□ 0.75
RPUSD4-207ENST00000532800 SPATA31C2B4DYI2 1134 aa19.72■□□□□ 0.75
RPUSD4-207ENST00000532800 NOP56O00567 594 aaKnown RBP19.72■□□□□ 0.75
RPUSD4-207ENST00000532800 TREHO43280 583 aa19.72■□□□□ 0.75
RPUSD4-207ENST00000532800 DDAH1O94760 285 aa19.72■□□□□ 0.75
RPUSD4-207ENST00000532800 PLEKHA8P1O95397 391 aa19.72■□□□□ 0.75
RPUSD4-207ENST00000532800 TRIM50Q86XT4 487 aa19.72■□□□□ 0.75
RPUSD4-207ENST00000532800 DBF4BQ8NFT6 615 aa19.72■□□□□ 0.75
RPUSD4-207ENST00000532800 CTCFLQ8NI51 663 aaPredicted RBP19.72■□□□□ 0.75
RPUSD4-207ENST00000532800 RAD9AQ99638 391 aa19.72■□□□□ 0.75
RPUSD4-207ENST00000532800 GPR20Q99678 358 aa19.72■□□□□ 0.75
RPUSD4-207ENST00000532800 BDP1A6H8Y1 2624 aa19.72■□□□□ 0.75
RPUSD4-207ENST00000532800 RSPH10B2B2RC85 870 aa19.71■□□□□ 0.75
RPUSD4-207ENST00000532800 MEIS2O14770 477 aa19.71■□□□□ 0.75
RPUSD4-207ENST00000532800 FIBPO43427 364 aa19.71■□□□□ 0.75
RPUSD4-207ENST00000532800 PRC1O43663 620 aa19.71■□□□□ 0.75
RPUSD4-207ENST00000532800 EFCAB14O75071 495 aa19.71■□□□□ 0.75
RPUSD4-207ENST00000532800 STAM2O75886 525 aa19.71■□□□□ 0.75
RPUSD4-207ENST00000532800 RSPH10BP0C881 870 aa19.71■□□□□ 0.75
RPUSD4-207ENST00000532800 RXRAP19793 462 aa19.71■□□□□ 0.75
RPUSD4-207ENST00000532800 MKRN4PQ13434 485 aaPredicted RBP19.71■□□□□ 0.75
RPUSD4-207ENST00000532800 METTL7BQ6UX53 244 aa19.71■□□□□ 0.75
RPUSD4-207ENST00000532800 CMTR1Q8N1G2 835 aaKnown RBP19.71■□□□□ 0.75
RPUSD4-207ENST00000532800 SMARCC2Q8TAQ2 1214 aa19.71■□□□□ 0.75
RPUSD4-207ENST00000532800 RRP36Q96EU6 259 aaKnown RBP19.71■□□□□ 0.75
RPUSD4-207ENST00000532800 MAP3K14Q99558 947 aa19.71■□□□□ 0.75
RPUSD4-207ENST00000532800 OSBPL7Q9BZF2 842 aa19.71■□□□□ 0.75
RPUSD4-207ENST00000532800 RNPEPQ9H4A4 650 aa19.71■□□□□ 0.75
RPUSD4-207ENST00000532800 LINC01553A4QN01 128 aa19.7■□□□□ 0.74
RPUSD4-207ENST00000532800 SH2B2O14492 632 aaPredicted RBP19.7■□□□□ 0.74
RPUSD4-207ENST00000532800 CTSHP09668 335 aa19.7■□□□□ 0.74
RPUSD4-207ENST00000532800 KIF5BP33176 963 aa19.7■□□□□ 0.74
RPUSD4-207ENST00000532800 SP4Q02446 784 aa19.7■□□□□ 0.74
RPUSD4-207ENST00000532800 NEDD9Q14511 834 aa19.7■□□□□ 0.74
RPUSD4-207ENST00000532800 CASC1Q6TDU7 716 aa19.7■□□□□ 0.74
RPUSD4-207ENST00000532800 RAB11FIP4Q86YS3 637 aa19.7■□□□□ 0.74
RPUSD4-207ENST00000532800 SRBD1Q8N5C6 995 aaKnown RBP19.7■□□□□ 0.74
RPUSD4-207ENST00000532800 LSG1Q9H089 658 aaKnown RBP19.7■□□□□ 0.74
RPUSD4-207ENST00000532800 EMSYQ7Z589 1322 aa19.7■□□□□ 0.74
RPUSD4-207ENST00000532800 ERVK-21P61565 698 aa19.69■□□□□ 0.74
RPUSD4-207ENST00000532800 AAK1Q2M2I8 961 aa19.69■□□□□ 0.74
RPUSD4-207ENST00000532800 PLEKHG4Q58EX7 1191 aa19.69■□□□□ 0.74
RPUSD4-207ENST00000532800 UTP14CQ5TAP6 766 aaKnown RBP19.69■□□□□ 0.74
RPUSD4-207ENST00000532800 PCNX4Q63HM2 1172 aa19.69■□□□□ 0.74
RPUSD4-207ENST00000532800 NFXL1Q6ZNB6 911 aa19.69■□□□□ 0.74
RPUSD4-207ENST00000532800 MYOCDQ8IZQ8 938 aa19.69■□□□□ 0.74
RPUSD4-207ENST00000532800 CUL5Q93034 780 aa19.69■□□□□ 0.74
RPUSD4-207ENST00000532800 TGS1Q96RS0 853 aaKnown RBP19.69■□□□□ 0.74
RPUSD4-207ENST00000532800 USP26Q9BXU7 913 aa19.69■□□□□ 0.74
RPUSD4-207ENST00000532800 SUGCTQ9HAC7 445 aa19.69■□□□□ 0.74
RPUSD4-207ENST00000532800 SETD4Q9NVD3 440 aa19.69■□□□□ 0.74
RPUSD4-207ENST00000532800 SEC63Q9UGP8 760 aaKnown RBP19.69■□□□□ 0.74
RPUSD4-207ENST00000532800 hCG_1642624A0A1W2PR95 340 aa19.68■□□□□ 0.74
RPUSD4-207ENST00000532800 PIK3CDO00329 1044 aa19.68■□□□□ 0.74
RPUSD4-207ENST00000532800 BRWD1Q9NSI6 2320 aa19.68■□□□□ 0.74
RPUSD4-207ENST00000532800 CCDC69A6NI79 296 aa19.67■□□□□ 0.74
RPUSD4-207ENST00000532800 SLC27A2O14975 620 aa19.67■□□□□ 0.74
RPUSD4-207ENST00000532800 SMARCA1P28370 1054 aa19.67■□□□□ 0.74
RPUSD4-207ENST00000532800 MCM5P33992 734 aa19.67■□□□□ 0.74
RPUSD4-207ENST00000532800 C17orf80Q9BSJ5 609 aa19.67■□□□□ 0.74
RPUSD4-207ENST00000532800 MTA3Q9BTC8 594 aa19.67■□□□□ 0.74
RPUSD4-207ENST00000532800 LRRC2Q9BYS8 371 aa19.67■□□□□ 0.74
RPUSD4-207ENST00000532800 COG5Q9UP83 839 aa19.67■□□□□ 0.74
RPUSD4-207ENST00000532800 AMHP03971 560 aa19.66■□□□□ 0.74
RPUSD4-207ENST00000532800 GNAQP50148 359 aa19.66■□□□□ 0.74
RPUSD4-207ENST00000532800 ADAM17P78536 824 aa19.66■□□□□ 0.74
RPUSD4-207ENST00000532800 UBE2SQ16763 222 aa19.66■□□□□ 0.74
RPUSD4-207ENST00000532800 LMBR1Q8WVP7 490 aa19.66■□□□□ 0.74
RPUSD4-207ENST00000532800 HLA-CQ95604 372 aa19.66■□□□□ 0.74
RPUSD4-207ENST00000532800 TMEM87BQ96K49 555 aa19.66■□□□□ 0.74
RPUSD4-207ENST00000532800 SENP7Q9BQF6 1050 aa19.66■□□□□ 0.74
RPUSD4-207ENST00000532800 LZTS2Q9BRK4 669 aa19.66■□□□□ 0.74
RPUSD4-207ENST00000532800 ESYT1Q9BSJ8 1104 aa19.66■□□□□ 0.74
RPUSD4-207ENST00000532800 ZNF215Q9UL58 517 aaPredicted RBP19.66■□□□□ 0.74
RPUSD4-207ENST00000532800 INSL6Q9Y581 213 aa19.66■□□□□ 0.74
RPUSD4-207ENST00000532800 KAT6AQ92794 2004 aa19.66■□□□□ 0.74
RPUSD4-207ENST00000532800 ATP9AO75110 1047 aa19.65■□□□□ 0.74
RPUSD4-207ENST00000532800 COL9A1P20849 921 aa19.65■□□□□ 0.74
RPUSD4-207ENST00000532800 HTRA4P83105 476 aaPredicted RBP19.65■□□□□ 0.74
RPUSD4-207ENST00000532800 ARHGAP4P98171 946 aa19.65■□□□□ 0.74
RPUSD4-207ENST00000532800 CREB3L3Q68CJ9 461 aa19.65■□□□□ 0.74
RPUSD4-207ENST00000532800 XRRA1Q6P2D8 792 aa19.65■□□□□ 0.74
RPUSD4-207ENST00000532800 NLRX1Q86UT6 975 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms