RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 OGFRQ9NZT2 677 aa16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 KCNK3O14649 394 aa16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 NR2F2P24468 414 aa16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 ADCY8P40145 1251 aa16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 MYL1P05976 194 aa16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 PSMC2P35998 433 aaKnown RBP16.09■□□□□ 0.17
PCDHA9-202ENST00000532602 KRIT1O00522 736 aa16.08■□□□□ 0.17
PCDHA9-202ENST00000532602 SLC12A6Q9UHW9 1150 aa16.08■□□□□ 0.17
PCDHA9-202ENST00000532602 ATP8B3O60423 1300 aa16.08■□□□□ 0.17
PCDHA9-202ENST00000532602 KRT10P13645 584 aa16.08■□□□□ 0.17
PCDHA9-202ENST00000532602 BFSP1Q12934 665 aa16.08■□□□□ 0.17
PCDHA9-202ENST00000532602 DDX41Q9UJV9 622 aaKnown RBP16.08■□□□□ 0.17
PCDHA9-202ENST00000532602 RIMS1Q86UR5 1692 aaKnown RBP16.08■□□□□ 0.17
PCDHA9-202ENST00000532602 ADRA2BP18089 450 aa16.08■□□□□ 0.16
PCDHA9-202ENST00000532602 DDIT3P35638 169 aa16.08■□□□□ 0.16
PCDHA9-202ENST00000532602 VPS41P49754 854 aa16.08■□□□□ 0.16
PCDHA9-202ENST00000532602 PRPSAP1Q14558 356 aa16.08■□□□□ 0.16
PCDHA9-202ENST00000532602 ELF2Q15723 593 aa16.08■□□□□ 0.16
PCDHA9-202ENST00000532602 VCXQ9H320 206 aa16.08■□□□□ 0.16
PCDHA9-202ENST00000532602 PCDHA5Q9Y5H7 936 aa16.08■□□□□ 0.16
PCDHA9-202ENST00000532602 ABCB11O95342 1321 aa16.08■□□□□ 0.16
PCDHA9-202ENST00000532602 ABCC12Q96J65 1359 aa16.08■□□□□ 0.16
PCDHA9-202ENST00000532602 DIP2CQ9Y2E4 1556 aa16.08■□□□□ 0.16
PCDHA9-202ENST00000532602 ZNF131P52739 623 aa16.08■□□□□ 0.16
PCDHA9-202ENST00000532602 PPP4R1Q8TF05 950 aa16.08■□□□□ 0.16
PCDHA9-202ENST00000532602 GOLGA8IPA6NC78 632 aa16.08■□□□□ 0.16
PCDHA9-202ENST00000532602 GOLGA8JA6NMD2 632 aa16.08■□□□□ 0.16
PCDHA9-202ENST00000532602 MYO1FO00160 1098 aa16.08■□□□□ 0.16
PCDHA9-202ENST00000532602 PSAPP07602 524 aa16.08■□□□□ 0.16
PCDHA9-202ENST00000532602 LMNB1P20700 586 aa16.08■□□□□ 0.16
PCDHA9-202ENST00000532602 NECTIN1Q15223 517 aa16.08■□□□□ 0.16
PCDHA9-202ENST00000532602 BANK1Q8NDB2 785 aa16.08■□□□□ 0.16
PCDHA9-202ENST00000532602 MROH7-TTC4A0A0A0MT08 1334 aa16.08■□□□□ 0.16
PCDHA9-202ENST00000532602 USP17L10C9JJH3 530 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 THAP12O43422 761 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 GBP1P32455 592 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 SURF1Q15526 300 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 CAPN12Q6ZSI9 719 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 OTUD5Q96G74 571 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 DHTKD1Q96HY7 919 aaPredicted RBP16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 NLRP4Q96MN2 994 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 ISCA1Q9BUE6 129 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 NUF2Q9BZD4 464 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 IGSF3O75054 1194 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 PLCG1P19174 1290 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 LMNB2Q03252 620 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 RC3H1Q5TC82 1133 aaKnown RBP16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 PDXDC2PQ6P474 469 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 CEP95Q96GE4 821 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 TMEM260Q9NX78 707 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 FBXO40Q9UH90 709 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 MAN1B1Q9UKM7 699 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 RNF40O75150 1001 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 COPB1P53618 953 aaKnown RBP16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 PIGOQ8TEQ8 1089 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 STAG1Q8WVM7 1258 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 BRIP1Q9BX63 1249 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 EIF3CLB5ME19 914 aaKnown RBP16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 LRRN2O75325 713 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 TFAMQ00059 246 aaKnown RBP16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 CDKL2Q92772 493 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 EIF3CQ99613 913 aaKnown RBP16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 FAM49AQ9H0Q0 323 aaPredicted RBP16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 POLD4Q9HCU8 107 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 FAM149B1Q96BN6 582 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 RUNDC3BQ96NL0 473 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 TMEM47Q9BQJ4 181 aa16.07■□□□□ 0.16
PCDHA9-202ENST00000532602 RGS16O15492 202 aaPredicted RBP16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 PPFIA4O75335 1185 aa16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 TROVE2P10155 538 aaKnown RBP eCLIP16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 SCARF1Q14162 830 aa16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 SPATA31A1Q5TZJ5 1347 aa16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 ZNF449Q6P9G9 518 aa16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 ANKRD13CQ8N6S4 541 aa16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 PKNOX2Q96KN3 472 aa16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 CDHR2Q9BYE9 1310 aa16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 HOMER3Q9NSC5 361 aa16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 PCDHA6Q9UN73 950 aa16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 PCDHA8Q9Y5H6 950 aa16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 SRGAP2BP0DMP2 458 aa16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 FAM186BQ8IYM0 893 aa16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 TUBGCP2Q9BSJ2 902 aa16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 PLA2G4BP0C869 781 aa16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 EEF1GP26641 437 aaKnown RBP16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 GUCY2FP51841 1108 aa16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 MYO1EQ12965 1108 aa16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 ALCAMQ13740 583 aa16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 SCARA5Q6ZMJ2 495 aa16.06■□□□□ 0.16
PCDHA9-202ENST00000532602 USP17L15C9J2P7 530 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 USP17L13C9JLJ4 530 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 USP17L11C9JVI0 530 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 USP17L18D6R9N7 530 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 USP17L22D6RA61 530 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 USP17L17D6RBQ6 530 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 USP17L19D6RCP7 530 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 USP17L20D6RJB6 530 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 USP17L24Q0WX57 530 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 VPS72Q15906 364 aa16.05■□□□□ 0.16
PCDHA9-202ENST00000532602 DPCR1Q3MIW9 517 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms