RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 TRIM43Q96BQ3 446 aaPredicted RBP15.91■□□□□ 0.14
TSPAN4-220ENST00000532375 SPATA33Q96N06 139 aa15.91■□□□□ 0.14
TSPAN4-220ENST00000532375 LLPHQ9BRT6 129 aaKnown RBP15.91■□□□□ 0.14
TSPAN4-220ENST00000532375 C16orf70Q9BSU1 422 aa15.91■□□□□ 0.14
TSPAN4-220ENST00000532375 ALG1Q9BT22 464 aa15.91■□□□□ 0.14
TSPAN4-220ENST00000532375 SH2B1Q9NRF2 756 aaPredicted RBP15.91■□□□□ 0.14
TSPAN4-220ENST00000532375 LTBP2Q14767 1821 aa15.91■□□□□ 0.14
TSPAN4-220ENST00000532375 DHX15O43143 795 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-220ENST00000532375 ITGB3BPQ13352 177 aaPredicted RBP15.9■□□□□ 0.14
TSPAN4-220ENST00000532375 MTMR1Q13613 665 aa15.9■□□□□ 0.14
TSPAN4-220ENST00000532375 DGKDQ16760 1214 aa15.9■□□□□ 0.14
TSPAN4-220ENST00000532375 NBPF20Q3BBV1 942 aa15.9■□□□□ 0.14
TSPAN4-220ENST00000532375 BRDTQ58F21 947 aaPredicted RBP15.9■□□□□ 0.14
TSPAN4-220ENST00000532375 PPP1R13LQ8WUF5 828 aa15.9■□□□□ 0.14
TSPAN4-220ENST00000532375 TNFRSF25Q93038 417 aa15.9■□□□□ 0.14
TSPAN4-220ENST00000532375 VTI1AQ96AJ9 217 aa15.9■□□□□ 0.14
TSPAN4-220ENST00000532375 CDHR1Q96JP9 859 aa15.9■□□□□ 0.14
TSPAN4-220ENST00000532375 GPR20Q99678 358 aa15.9■□□□□ 0.14
TSPAN4-220ENST00000532375 GDF15Q99988 308 aa15.9■□□□□ 0.14
TSPAN4-220ENST00000532375 MLXIPQ9HAP2 919 aa15.9■□□□□ 0.14
TSPAN4-220ENST00000532375 AGO4Q9HCK5 861 aaKnown RBP15.9■□□□□ 0.14
TSPAN4-220ENST00000532375 TBX21Q9UL17 535 aa15.9■□□□□ 0.14
TSPAN4-220ENST00000532375 TRIP12Q14669 1992 aaPredicted RBP15.89■□□□□ 0.13
TSPAN4-220ENST00000532375 GSTTP1A0A1W2PQM5 241 aa15.89■□□□□ 0.13
TSPAN4-220ENST00000532375 KIAA0355O15063 1070 aa15.89■□□□□ 0.13
TSPAN4-220ENST00000532375 PQBP1O60828 265 aaKnown RBP15.89■□□□□ 0.13
TSPAN4-220ENST00000532375 F2P00734 622 aa15.89■□□□□ 0.13
TSPAN4-220ENST00000532375 USP11P51784 963 aa15.89■□□□□ 0.13
TSPAN4-220ENST00000532375 EARS2Q5JPH6 523 aaKnown RBP15.89■□□□□ 0.13
TSPAN4-220ENST00000532375 CTAGE1Q96RT6 745 aa15.89■□□□□ 0.13
TSPAN4-220ENST00000532375 SEZ6LQ9BYH1 1024 aa15.89■□□□□ 0.13
TSPAN4-220ENST00000532375 RANBP2P49792 3224 aaKnown RBP15.88■□□□□ 0.13
TSPAN4-220ENST00000532375 CYP3A7-CYP3A51PA0A087WV96 503 aa15.88■□□□□ 0.13
TSPAN4-220ENST00000532375 ST18O60284 1047 aa15.88■□□□□ 0.13
TSPAN4-220ENST00000532375 CLTBP09497 229 aa15.88■□□□□ 0.13
TSPAN4-220ENST00000532375 CYP3A7P24462 503 aa15.88■□□□□ 0.13
TSPAN4-220ENST00000532375 NFRKBQ6P4R8 1299 aa15.88■□□□□ 0.13
TSPAN4-220ENST00000532375 GIMAP8Q8ND71 665 aaPredicted RBP15.88■□□□□ 0.13
TSPAN4-220ENST00000532375 TBCKQ8TEA7 893 aa15.88■□□□□ 0.13
TSPAN4-220ENST00000532375 WASF1Q92558 559 aa15.88■□□□□ 0.13
TSPAN4-220ENST00000532375 TMX3Q96JJ7 454 aa15.88■□□□□ 0.13
TSPAN4-220ENST00000532375 MBOAT7Q96N66 472 aa15.88■□□□□ 0.13
TSPAN4-220ENST00000532375 TRPV6Q9H1D0 765 aa15.88■□□□□ 0.13
TSPAN4-220ENST00000532375 NFASCO94856 1347 aa15.88■□□□□ 0.13
TSPAN4-220ENST00000532375 DCDC2CA8MYV0 355 aa15.87■□□□□ 0.13
TSPAN4-220ENST00000532375 B4GALT4O60513 344 aa15.87■□□□□ 0.13
TSPAN4-220ENST00000532375 ZNF286BP0CG31 522 aa15.87■□□□□ 0.13
TSPAN4-220ENST00000532375 MAGEA10P43363 369 aaPredicted RBP15.87■□□□□ 0.13
TSPAN4-220ENST00000532375 PSEN2P49810 448 aa15.87■□□□□ 0.13
TSPAN4-220ENST00000532375 HIC1Q14526 733 aa15.87■□□□□ 0.13
TSPAN4-220ENST00000532375 KRT40Q6A162 431 aa15.87■□□□□ 0.13
TSPAN4-220ENST00000532375 SESTD1Q86VW0 696 aa15.87■□□□□ 0.13
TSPAN4-220ENST00000532375 PLA2G4DQ86XP0 818 aa15.87■□□□□ 0.13
TSPAN4-220ENST00000532375 PKD2L1Q9P0L9 805 aa15.87■□□□□ 0.13
TSPAN4-220ENST00000532375 MROH7Q68CQ1 1323 aa15.87■□□□□ 0.13
TSPAN4-220ENST00000532375 WDR81Q562E7 1941 aa15.86■□□□□ 0.13
TSPAN4-220ENST00000532375 FAM205CA6NFA0 338 aa15.86■□□□□ 0.13
TSPAN4-220ENST00000532375 ATG7O95352 703 aa15.86■□□□□ 0.13
TSPAN4-220ENST00000532375 CCNE2O96020 404 aa15.86■□□□□ 0.13
TSPAN4-220ENST00000532375 MMP1P03956 469 aa15.86■□□□□ 0.13
TSPAN4-220ENST00000532375 LGALS2P05162 132 aa15.86■□□□□ 0.13
TSPAN4-220ENST00000532375 ZNF76P36508 570 aa15.86■□□□□ 0.13
TSPAN4-220ENST00000532375 PTPN11Q06124 597 aaPredicted RBP15.86■□□□□ 0.13
TSPAN4-220ENST00000532375 NR5A1Q13285 461 aa15.86■□□□□ 0.13
TSPAN4-220ENST00000532375 PCYT2Q99447 389 aa15.86■□□□□ 0.13
TSPAN4-220ENST00000532375 TRMT13Q9NUP7 481 aaKnown RBP15.86■□□□□ 0.13
TSPAN4-220ENST00000532375 TMEM39AQ9NV64 488 aa15.86■□□□□ 0.13
TSPAN4-220ENST00000532375 COLQQ9Y215 455 aaPredicted RBP15.86■□□□□ 0.13
TSPAN4-220ENST00000532375 BTBD18B2RXH4 712 aa15.85■□□□□ 0.13
TSPAN4-220ENST00000532375 XBP1P17861 261 aa15.85■□□□□ 0.13
TSPAN4-220ENST00000532375 HOXC8P31273 242 aa15.85■□□□□ 0.13
TSPAN4-220ENST00000532375 BMP8BP34820 402 aa15.85■□□□□ 0.13
TSPAN4-220ENST00000532375 MFSD10Q14728 455 aa15.85■□□□□ 0.13
TSPAN4-220ENST00000532375 NONOQ15233 471 aaKnown RBP eCLIP15.85■□□□□ 0.139e-6■■■□□ 19
TSPAN4-220ENST00000532375 INF2Q27J81 1249 aa15.85■□□□□ 0.13
TSPAN4-220ENST00000532375 KIAA0753Q2KHM9 967 aa15.85■□□□□ 0.13
TSPAN4-220ENST00000532375 CHRDL2Q6WN34 429 aa15.85■□□□□ 0.13
TSPAN4-220ENST00000532375 KRT25Q7Z3Z0 450 aa15.85■□□□□ 0.13
TSPAN4-220ENST00000532375 SEPT1Q8WYJ6 367 aa15.85■□□□□ 0.13
TSPAN4-220ENST00000532375 UIMC1Q96RL1 719 aa15.85■□□□□ 0.13
TSPAN4-220ENST00000532375 IGKV6D-21A0A0A0MT36 114 aa15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 H3BRB1 525 aa15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 IPO5O00410 1097 aaKnown RBP15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 NOP56O00567 594 aaKnown RBP15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 MSH4O15457 936 aa15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 LGR5O75473 907 aa15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 TDP2O95551 362 aa15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 TCF7P36402 384 aaPredicted RBP15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 MCM2P49736 904 aa15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 HMGN5P82970 282 aaKnown RBP15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 MDM2Q00987 491 aaPredicted RBP15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 SP4Q02446 784 aa15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 Q4G0T1 1027 aa15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 PRR16Q569H4 304 aa15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 GDF6Q6KF10 455 aaPredicted RBP15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 MOXD1Q6UVY6 613 aa15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 TRIM50Q86XT4 487 aa15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 FBXO18Q8NFZ0 1043 aa15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 BADQ92934 168 aa15.84■□□□□ 0.13
TSPAN4-220ENST00000532375 VWCEQ96DN2 955 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms